CX046757

Overview
NameCX046757
Unique NameCX046757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX046757_ssr383 microsatellite CX046757_ssr383:383..392. BLAST: Citrus ESTs to Prunus persica proteins V1
CX046757_ssr393 microsatellite CX046757_ssr393:393..414. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_PSEP1 (Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pcm PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11
Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVG--NIFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GWP  APY+ I V A APE+PQAL+DQL PGGRMVIPVG     Q L ++ + + G  S     +VR+VPL
Sbjct:  137 GWPALAPYNGIIVTAVAPEVPQALLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHG-FSRRVLGAVRFVPL 206          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_MAGSA (Protein-L-isoaspartate O-methyltransferase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=pcm PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11
Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP---VGNIFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GWPE AP+D I V AAAP+IP AL+DQLKP G MV+P   VG I Q+L  + K  D  + I     VR+VPL
Sbjct:  137 GWPEQAPFDRIMVTAAAPDIPPALVDQLKPDGIMVLPLGDVGGIDQELVRITKT-DRGIDIQPFLPVRFVPL 207          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_DROME (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVG--NIFQDLKVVDKNQDGSLSIWSETSVRYVPLT 212
            G+P  APY+AIHVGAAAP+ P  LI+QL  GGR+++PVG     Q ++  DK+ +G + +     V YVPLT
Sbjct:  151 GYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLT 222          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT1_PELPD (Protein-L-isoaspartate O-methyltransferase 1 OS=Pelobacter propionicus (strain DSM 2379) GN=pcm1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.463e-11
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNIFQD--LKVVDKNQDGSLSIWSETSVRYVPLTSRDAQLRGW 239
            GW E AP+DAI V A AP +PQ L DQL   GR+VIPVG+  +   +K+V KN DG+L   +    R+VPL  R    +GW
Sbjct:  140 GWDEEAPFDAIIVTAGAPAVPQVLTDQLAVDGRLVIPVGDEREQRLVKIVRKN-DGTLETTTSIGCRFVPLIGR----QGW 215          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_PSEU5 (Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=pcm PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 4.523e-11
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVG-NIFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GWP  APY+ I V AAA ++PQAL+DQL PGGR+VIPVG    Q L ++ + ++G      +T VR+VPL
Sbjct:  137 GWPALAPYNGIIVTAAAADVPQALLDQLAPGGRLVIPVGAGEVQQLMLIIREENGFSRHLLDT-VRFVPL 205          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT1_METAC (Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina acetivorans GN=pcm1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.523e-11
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNIFQDLKVVDKNQDGSLSIWSETSVRYVPLTSR 218
            G+ + APYD I V  AAP+IP+ L++QLKPGG M+IPVG+  Q+L  + K+ +G +       V +VPL  +
Sbjct:  177 GYSKCAPYDRIVVTCAAPDIPEPLLEQLKPGGIMIIPVGDYIQELVRIKKDPEGKIHEEKRGGVVFVPLIGK 248          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_VIBPA (Protein-L-isoaspartate O-methyltransferase OS=Vibrio parahaemolyticus GN=pcm PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNIFQDLKVVDKNQDGSLSIWSETSVRYVPLTSRD 221
            GW    P+DAI V AAA  IPQAL+ QLK GG+MVIPVG+  Q L  +++  D  LS   E  VR+VPL + D
Sbjct:  135 GWETKGPFDAIIVTAAAEVIPQALLSQLKDGGKMVIPVGDAEQQLLRIERKGDEYLSTVVE-MVRFVPLVAGD 206          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_PSEPW (Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida (strain W619) GN=pcm PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV---GNIFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GW   APY+ I V A APE+PQAL+DQL PGGRMVIPV   G + Q + +V + Q  S  +    +VR+VPL
Sbjct:  137 GWQALAPYNGIIVTAVAPEVPQALLDQLAPGGRMVIPVGPAGEVQQLMLIVREEQGFSRRVLG--AVRFVPL 206          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_PSEAE (Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas aeruginosa GN=pcm PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV-GNIFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GW   APY+ I V AAA E+PQ+L+DQL PGGR+VIPV G   Q L ++ + +DG  S     SVR+VPL
Sbjct:  137 GWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRLVIPVGGGEVQQLMLIVRTEDG-FSRQVLDSVRFVPL 205          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_PSEAB (Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pcm PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV-GNIFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GW   APY+ I V AAA E+PQ+L+DQL PGGR+VIPV G   Q L ++ + +DG  S     SVR+VPL
Sbjct:  137 GWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRLVIPVGGGEVQQLMLIVRTEDG-FSRQVLDSVRFVPL 205          
The following BLAST results are available for this feature:
BLAST of CX046757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
PIMT_PSEP12.030e-1153.52Protein-L-isoaspartate O-methyltransferase OS=Pseu... [more]
PIMT_MAGSA2.030e-1154.17Protein-L-isoaspartate O-methyltransferase OS=Magn... [more]
PIMT_DROME2.030e-1148.61Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT1_PELPD3.463e-1148.15Protein-L-isoaspartate O-methyltransferase 1 OS=Pe... [more]
PIMT_PSEU54.523e-1151.43Protein-L-isoaspartate O-methyltransferase OS=Pseu... [more]
PIMT1_METAC4.523e-1144.44Protein-L-isoaspartate O-methyltransferase 1 OS=Me... [more]
PIMT_VIBPA5.908e-1152.05Protein-L-isoaspartate O-methyltransferase OS=Vibr... [more]
PIMT_PSEPW5.908e-1151.39Protein-L-isoaspartate O-methyltransferase OS=Pseu... [more]
PIMT_PSEAE5.908e-1152.86Protein-L-isoaspartate O-methyltransferase OS=Pseu... [more]
PIMT_PSEAB5.908e-1152.86Protein-L-isoaspartate O-methyltransferase OS=Pseu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A06-B11-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046757 ID=CX046757; Name=CX046757; organism=Citrus sinensis; type=EST; length=467bp
AAGGTTGGCCAGAGTTTGCTCCCTATGATGCAATACATGTTGGAGCAGCA
GCCCCAGAAATTCCTCAGGCACTTATTGACCAGTTGAAACCTGGAGGCAG
AATGGTGATTCCAGTTGGTAATATATTTCAGGATTTGAAGGTGGTTGACA
AGAACCAAGATGGCTCTCTTAGCATCTGGAGTGAAACCTCTGTTCGTTAT
GTCCCTCTTACCAGTCGGGATGCCCAGTTGCGGGGCTGGTGAGGTTGATT
TCTTTTTCACTTGAAGATGGTTGGCAAGCTTTTGGTTATAGGACCAGGTT
GGAATGTGGAACAGAATCTCACTCTAATCCAGTATCATTGTGGGTTTTTT
TGGTTTTTTTTTCTCCTCTAAATTTCCTTGTATGTGTGTGTGTATATATA
TATATATATATATAATAAGCAAGTTATGCAAGGTTGTCTAGTTTCCATTC
NAAAAAAAAAAAAAAAA
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