CN186176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH601_PROMM (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL1 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.664e-56 Identity = 119/226 (52.65%), Postives = 156/226 (69.03%), Query Frame = 3 Query: 9 FGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 FG+RRKA L DIA++TG + D + +E S + LG R++TI KD+TTI+A ++D + AR+A +K+EL ETDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AA+EEGIV GGG L+HLS + + ++L D D+R G +IVQ+AL APA IA NA G+NA++ YE++L+AG++D KV R AL Sbjct: 279 FGDRRKAALADIAVLTGGTVISEDRAMTLEKVSQDDLGQVRRITISKDNTTIVAKDENRDAVNARVASIKRELDETDSEYDREKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGTTLLHLSKGLSKLAEQLND-DQRTGVEIVQRALSAPARQIAINAGENGDVVISEI--QRLNKGFNAISSTYEDLLEAGILDATKVVRLAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACZE (60 kDa chaperonin OS=Lactobacillus zeae GN=groL PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.174e-56 Identity = 120/227 (52.86%), Postives = 156/227 (68.72%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA L+DIA +TG + DLGL +++T +EQLG A KVT+ KD+TTI+ A SKD I R+ +KK++ +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV D +PA+ E+ D + G +IV +AL P IA NA + GYNA TD++E+M ++G+IDP KVTR AL Sbjct: 278 GFGDRRKAQLEDIATLTGGTVISSDLGLDLKDTKLEQLGRAGKVTVTKDNTTIVDGAGSKDAIAERVNIIKKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDMAKSGIIDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACCB (60 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groL PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.174e-56 Identity = 120/227 (52.86%), Postives = 156/227 (68.72%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA L+DIA +TG + DLGL +++T +EQLG A KVT+ KD+TTI+ A SKD I R+ +KK++ +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV D +PA+ E+ D + G +IV +AL P IA NA + GYNA TD++E+M ++G+IDP KVTR AL Sbjct: 278 GFGDRRKAQLEDIATLTGGTVISSDLGLDLKDTKLEQLGRAGKVTVTKDNTTIVDGAGSKDAIAERVNIIKKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDMAKSGIIDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACC3 (60 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groL PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.174e-56 Identity = 120/227 (52.86%), Postives = 156/227 (68.72%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA L+DIA +TG + DLGL +++T +EQLG A KVT+ KD+TTI+ A SKD I R+ +KK++ +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV D +PA+ E+ D + G +IV +AL P IA NA + GYNA TD++E+M ++G+IDP KVTR AL Sbjct: 278 GFGDRRKAQLEDIATLTGGTVISSDLGLDLKDTKLEQLGRAGKVTVTKDNTTIVDGAGSKDAIAERVNIIKKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDMAKSGIIDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_EUBR3 (60 kDa chaperonin OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=groL PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.174e-56 Identity = 111/227 (48.90%), Postives = 161/227 (70.93%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 G+G+RRKA+L+DIAI+TG + + DLGL +++T+++ LG A+ V ++K++T I+ A KD I R++Q++ ++ ET S +D EKL ER+AK++GGVAVI+VGAATETE+++ KLR+EDA NAT AA+EEGI+ GGG+A +H S V + D LE DE+ GA ++ KAL AP IA NA +S TG+NA T++Y +M+ G++DP KVTR AL Sbjct: 278 GYGDRRKAMLEDIAILTGGQVISSDLGLELKDTTIDMLGRAKSVKVQKENTVIVDGAGDKDAIAGRVSQIRGQIDETTSEFDKEKLQERLAKMAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGIIAGGGSAYIHASKKVAELVDTLE-GDEKTGAKVILKALEAPLYYIAANAGLEGAVIINKVKESAPGTGFNAATEEYVDMVDNGILDPVKVTRSAL 503
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BACHD (60 kDa chaperonin OS=Bacillus halodurans GN=groL PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.174e-56 Identity = 116/227 (51.10%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG E DLGL +++ ++ QLG A KV + K++TTI+ A D+I AR+ Q+K ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++ + A+ + DE G +IV +AL P IAHNA E G+NA T ++ NM++AG++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAILTGGEVITEDLGLDLKSANITQLGRASKVVVTKENTTIVEGAGESDKIAARVNQIKAQIEETTSDFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVSSIGAEGDEATGVNIVLRALEEPVRQIAHNAGLEGSVIVERLKKEEAGFGFNAATGEWVNMVEAGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.839e-56 Identity = 108/229 (47.16%), Postives = 158/229 (69.00%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS--EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFGERR + L+DIAI+TG ++G+ +E + LGTA K+TI K+ TT++ D ++ ++ AR+ Q++ +TD Y+ EKL ERIA+LSGGVA+I+VGA TETEL+++KLR+EDA NAT AA+EEG+VPGGG L+ LS+ V IK ++ D ++++GADI+++AL P LIA NA + GYNA TD +EN+++ G+IDP+KV RC++ Sbjct: 164 GFGERRSSYLEDIAILTGGTVVGDEMGVSLEQATDAVLGTAAKITITKERTTVVGDGSTAADVAARVKQIRNLQMQTDQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSM 392
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACSS (60 kDa chaperonin OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=groL PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.839e-56 Identity = 118/227 (51.98%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK L+DIA +TGA DLGL ++ T+++QLGTA KVT+ KD TTI+ A SK I R+ +KK++AET S +D EKL ER+AKL+GGVAVIKVGAATETEL+++K RIEDA NAT AA+EEG V GGG AL+ + + V A++ E+ D + G +IV +AL P IA NA GYNA +ENM++AG++DP KVTR AL Sbjct: 278 GFGDRRKEQLEDIATLTGATVITSDLGLELKETTIDQLGTAGKVTVTKDDTTIVEGAGSKSAIAERVENIKKQIAETTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEQKYRIEDALNATRAAVEEGYVAGGGTALIDVIESVAALE---EEGDVQTGINIVLRALEEPVRQIATNAGLEGSVIVEKVKSQPVEVGYNAANGNWENMIEAGILDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_GALSU (60 kDa chaperonin, chloroplastic OS=Galdieria sulphuraria GN=groL PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.839e-56 Identity = 114/227 (50.22%), Postives = 161/227 (70.93%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK++L+DIAI+TG + D GL ++ + LG A KV + K+STTII++A +++ ++AR Q++K++ TDS Y+ EKL ER+AKL+GG+AVIKVGAATETE++D+KLR+EDA NAT AAIEEGIVPGGGA LVHL++ + + DE +GA IV+K++ AP I N + +++ GY+A T K+ NM ++G+IDPAKVTR AL Sbjct: 280 GFGDRRKSILEDIAILTGGQLITEDAGLSLDKVDLSMLGQANKVIVNKESTTIISNA-NENNVKARCEQIRKQIEITDSSYEKEKLQERLAKLAGGIAVIKVGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGATLVHLANDLFNWAKGVLKEDELIGALIVEKSITAPLKRIVQNEGKNGAIVVDEIKNLDFSIGYDASTSKFVNMYESGIIDPAKVTRSAL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.839e-56 Identity = 116/227 (51.10%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + DLGL +++ ++E LG A KV + K++TTI+ A ++I R+ QLK ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++ + A+K DE G +IV +AL P IAHNA E GYNA T +Y NM++ G++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAILTGGQVITEDLGLDLKSATIESLGRAAKVVVTKENTTIVEGAGDPEQISGRVNQLKAQVEETTSEFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVKAVDATGDEATGVNIVLRALEEPVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSAL 501 The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bpback to top |