CN186176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LISMF (60 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain F2365) GN=groL PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 114/227 (50.22%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + DLGL ++ +V+QLGTA KV + KD TTI+ A +I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV + + V A++ + D G +IV ++L P IAHNA G+NA ++ NM+ AG++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAILTGGQVITEDLGLELKTATVDQLGTANKVVVTKDDTTIVEGAGDSTQISARVNQIRAQMEETTSEFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAALE---AEGDVETGINIVLRSLEEPVRQIAHNAGLEGSVIVERLKHEAVGVGFNAANGEWVNMIDAGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LISMC (60 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groL PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 114/227 (50.22%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + DLGL ++ +V+QLGTA KV + KD TTI+ A +I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV + + V A++ + D G +IV ++L P IAHNA G+NA ++ NM+ AG++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAILTGGQVITEDLGLELKTATVDQLGTANKVVVTKDDTTIVEGAGDSTQISARVNQIRAQMEETTSEFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAALE---AEGDVETGINIVLRSLEEPVRQIAHNAGLEGSVIVERLKHEAVGVGFNAANGEWVNMIDAGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_DINSH (60 kDa chaperonin OS=Dinoroseobacter shibae (strain DFL 12) GN=groL PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 116/230 (50.43%), Postives = 163/230 (70.87%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA--DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDIAI+TG + + DLG+ +E+ +++ LG+A++V+I KD TTI+ A +K EI+AR+AQ++ ++ ET S YD EKL ER+AKL+GGVAVI+VG TE E+++RK R++DA NAT AA++EGIV GGG AL+ + H+ D LE A D+ +G +IV+KAL AP IA NA + S+ G+NA T++Y +M + GVIDPAKV R AL Sbjct: 280 GFGDRRKAMLQDIAILTGGQVISEDLGMKLESVTIDMLGSAKRVSITKDETTIVDGAGAKAEIEARVAQIRNQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALIQAAKHL----DGLEGANNDQNIGINIVRKALEAPLRQIAENAGVDGSVVAGKIRESSDLAFGFNAQTEEYGDMFKFGVIDPAKVVRTAL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_DESHY (60 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groL PE=3 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 114/227 (50.22%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG DLGL +ENT+++ LG AR++ + K+ TTI+ + S+D+I++R+ +KK++ ET S +D EKL ER+AKL+GGVAVI+VGAATE E++++KLRIEDA AT AA+EEGIV GGG ALV D A+ DE+ G IV +AL P IA+NA + G+NA+T+ YE+M+ AG++DPAKVTR AL Sbjct: 278 GFGDRRKAMLEDIAILTGGTVITEDLGLKLENTTIDMLGRARQIRVTKEETTIVEGSGSQDDIKSRVEAIKKQIDETTSDFDREKLQERLAKLAGGVAVIQVGAATEVEMKEKKLRIEDALAATRAAVEEGIVAGGGCALV---DAAKALDSLKLTGDEKTGVAIVYRALEEPLRQIANNAGFEGSIVVEKVRNGGRGVGFNALTEAYEDMIAAGIVDPAKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CHLPN (60 kDa chaperonin OS=Chlamydia pneumoniae GN=groL PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 110/227 (48.46%), Postives = 154/227 (67.84%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + + +LG+ +ENT++ LG A+KV + K+ TTI+ +K +IQAR +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG ALV + A L + DE +G I+ KAL AP IA NA GY+A+ D Y +M+ AG++DP KVTR AL Sbjct: 280 GFGDRRKAMLEDIAILTGGQLVSEELGMKLENTTLAMLGKAKKVIVTKEDTTIVEGLGNKPDIQARCDNIKKQIEDSTSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALVRCIPTLEAFLPMLANEDEAIGTRIILKALTAPLKQIASNAGKEGAIICQQVLARSANEGYDALRDAYTDMIDAGILDPTKVTRSAL 506
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BACP2 (60 kDa chaperonin OS=Bacillus pumilus (strain SAFR-032) GN=groL PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 113/227 (49.78%), Postives = 158/227 (69.60%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DI+++TG E DLGL +++T + QLG A KV + K++TTI+ + +I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V +I+ D D + G +IV ++L P IAHNA + E G+NA T+++ NM++ G++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDISVLTGGELITEDLGLDLKSTEIGQLGRASKVVVTKENTTIVEGSGDSAQIAARVNQIRAQVEETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYKKVASIE---ADGDVQTGVNIVLRSLEEPIRQIAHNAGLEGSVIVERLKNEEIGVGFNAATNEWVNMIEKGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 113/227 (49.78%), Postives = 159/227 (70.04%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DI+++TG E DLGL +++T + QLG A KV + K++TTI+ A ++I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++ + D + G +IV +AL P IAHNA + + G+NA T ++ NM++ G++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDISVLTGGEVITEDLGLDLKSTEIGQLGRASKVVVTKENTTIVEGAGDTEKIAARVNQIRAQVEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEKIGVGFNAATGEWVNMIEKGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_AKKM8 (60 kDa chaperonin OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=groL PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 112/228 (49.12%), Postives = 156/228 (68.42%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+++DIAI+TG + DLG+ +EN +E LG A++V + KD T I+ +A +I+ARI+Q+++++ +T S YD EKL ER+AKL+GGVAVI VGAATETE++++K R++DA +AT AA+EEGIVPGGG AL+ + +K + DE GA IV +A+ AP +A NA + T GYN TDKYE++L AGV+DP KVTR AL Sbjct: 279 GFGDRRKAMMEDIAILTGGKCITEDLGIKLENVGIEDLGQAKRVVVSKDETVIVEGSAKSSDIEARISQIRRQIKDTTSDYDREKLQERLAKLAGGVAVIHVGAATETEMKEKKARVDDALHATRAAVEEGIVPGGGVALIRAQKAIDTLK---LEGDEATGAQIVYRAVEAPLRQLACNAGREGALIVANVKGMKNTAEGYNVATDKYEDLLSAGVVDPTKVTRSAL 503
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH603_RHILO (60 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 113/228 (49.56%), Postives = 161/228 (70.61%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + + DLG+ +EN ++ LG A+KV+I K++TTI+ A K+EIQ R+AQ+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIVPGGG AL+ S + A+ ++D+ G IV++AL APA IA NA +++ T G+NA T +Y +M+ G++DP KV R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGQVISEDLGIKLENVGLDMLGRAKKVSISKENTTIVDGAGKKEEIQGRVAQIKQQIEETTSDYDKEKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGVALLRASLSINAVG---ANSDQTAGISIVRRALQAPARQIAANAGAEASIVAGKILENKGATFGFNAQTGEYGDMIAMGIVDPVKVVRTAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH602_THEFY (60 kDa chaperonin 2 OS=Thermobifida fusca (strain YX) GN=groL2 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55 Identity = 115/227 (50.66%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFGERRKA+LQDIAI+TG + A ++GL +EN ++ LG AR++T+ KD+TTI+ A + E+ RI Q++KE+ TDS +D EKL ER+AKL+GGV V++VGAATE EL++RK R+EDA +AT AA+EEGI+ GGG+ALVH + + D DE G IV++ALVAPA IA+NA + E GYNA T +Y +++ G+IDP KVTR A+ Sbjct: 278 GFGERRKAMLQDIAILTGGQVIAEEVGLTLENAELDVLGKARRITVTKDTTTIVDGAGDQSEVNDRINQIRKEIEATDSDWDREKLQERLAKLAGGVCVLRVGAATEVELKERKHRLEDAISATRAAVEEGIIAGGGSALVHAAKTLEG--DLGRTGDEATGVAIVRRALVAPARWIANNAGAEGNVVVSRIAELEPGHGYNAATGEYGDLVAQGIIDPVKVTRSAV 502 The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bpback to top |