CN186176

Overview
NameCN186176
Unique NameCN186176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CAMJJ (60 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=groL PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52
Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+L+DIAI+TG E  + +LG  +E+ +++ LG A  V I KD+TTI+  A  K  I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+         K KL+   DE +GA IV++AL AP   IA NA            ++ +  TG++A   +Y NML++G+IDP KV R AL
Sbjct:  279 GFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVAL 502          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CAMJE (60 kDa chaperonin OS=Campylobacter jejuni GN=groL PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52
Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+L+DIAI+TG E  + +LG  +E+ +++ LG A  V I KD+TTI+  A  K  I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+         K KL+   DE +GA IV++AL AP   IA NA            ++ +  TG++A   +Y NML++G+IDP KV R AL
Sbjct:  279 GFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVAL 502          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CAMJ8 (60 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=groL PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52
Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+L+DIAI+TG E  + +LG  +E+ +++ LG A  V I KD+TTI+  A  K  I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+         K KL+   DE +GA IV++AL AP   IA NA            ++ +  TG++A   +Y NML++G+IDP KV R AL
Sbjct:  279 GFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVAL 502          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BUCAP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=groL PE=3 SV=3)

HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52
Identity = 106/227 (46.70%), Postives = 153/227 (67.40%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDI+I+TG    + +L + +E +++E LG A++V I KD+TTII  +  K  IQ+RI Q+++E+ E  S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++  +  ++   E  D+ +G  +  +A+ AP   I  N+            D +   GYNA TD+Y +M+  G++DP KVTR AL
Sbjct:  280 GFGDRRKAMLQDISILTGGSVISEELAMDLEKSTLEDLGQAKRVVINKDTTTIIGGSGEKQAIQSRIGQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKISNLRGHNE--DQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNNVKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSAL 504          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH603_ACAM1 (60 kDa chaperonin 3 OS=Acaryochloris marina (strain MBIC 11017) GN=groL3 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52
Identity = 110/227 (48.46%), Postives = 155/227 (68.28%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRK LL DIA++TG +  + D GL +EN ++E +G AR+V I KD TT+I+++ ++  ++AR  Q+ + + ETDS ++ EKL ER+A+LSGGVAVIKVGAATETE++DRKL++EDA NAT AA+EEGIVPGGG  LVHL+  +     +    DE +GA I+ ++L AP   I  NA               + TGY+A+ ++Y +M  AG++DPAKVT   L
Sbjct:  280 GFGDRRKDLLADIAVLTGGQVISEDTGLTLENATLEMMGRARQVVITKDHTTLISES-NEAAVKARCEQIHRLIDETDSSFEKEKLHERLAQLSGGVAVIKVGAATETEMKDRKLKLEDAINATQAAVEEGIVPGGGTTLVHLAPQLEDWSAEHLVGDELIGAMILVRSLSAPLRQIVENAGLNGGVVVEQVKTLPFNTGYDALNNQYVDMFTAGIVDPAKVTSAGL 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52
Identity = 111/228 (48.68%), Postives = 157/228 (68.86%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+L+DIAI+TG +  + DLG+ +EN +++ LG A+KV I K++TTI+  A  K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+     V  I +   ++D + G +IV KAL AP   IA NA            + +  T G++A ++ Y +M+  G+IDPAKV R AL
Sbjct:  280 GFGDRRKAMLEDIAILTGGQLISDDLGMKLENVTIKMLGRAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRITN--PNSDVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIIDPAKVVRTAL 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_TERTT (60 kDa chaperonin OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=groL PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52
Identity = 110/228 (48.25%), Postives = 158/228 (69.30%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDIAI+TG    + ++GL +E+ ++E LG A++ T+ K+++ I+  A S D+I+AR+ Q++K++ ET S YD+EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG +L+     V AI D + E+ D+  G  I ++A+ AP   I  NA              E   GYNA +  Y +ML+ G++DPAKVTR AL
Sbjct:  280 GFGDRRKAMLQDIAILTGGTVISEEVGLDLESATLEHLGQAKRFTMSKENSVIVDGAGSADDIKARVNQIRKQIEETSSEYDAEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVSLMRA---VAAIADLQGENEDQTAGVAIARRAMEAPLRQIVTNAGEEASVVAEKVRGGEGNFGYNAGSGVYGDMLEMGILDPAKVTRTAL 504          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_RICCK (60 kDa chaperonin OS=Rickettsia canadensis (strain McKiel) GN=groL PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52
Identity = 111/228 (48.68%), Postives = 154/228 (67.54%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+++DIAI+T  E    DLG+ +EN S++ LGTA++VTI K++T I+  +  K  I+ R+ Q+K ++AET S YD EKL ER+AKLSGGVAV+KVG ATE E+++RK R+EDA  AT AA+EEG+V GGG  L+H S  +   K K+E+ D++ G +IV +AL  P   I  NA            +  +   G+NA   +Y +M+QAG+IDPAKV R AL
Sbjct:  280 GFGDRRKAMMEDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGSGDKKSIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHTSQIL--TKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNFGFNAQDMQYVDMIQAGIIDPAKVVRTAL 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_PSEA7 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain PA7) GN=groL PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52
Identity = 106/227 (46.70%), Postives = 155/227 (68.28%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDIAI+TG    + ++GL +E  ++E LG A++V I K++TTII  A  + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV     +  +K   ++ ++ +G  ++++A+ AP   I  NA                  G+NA T  Y +M++ G++DPAKVTR AL
Sbjct:  280 GFGDRRKAMLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEEQNVGIALLRRAVEAPLRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSAL 504          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_FUSNP (60 kDa chaperonin OS=Fusobacterium nucleatum subsp. polymorphum GN=groL PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52
Identity = 110/226 (48.67%), Postives = 151/226 (66.81%), Query Frame = 3
Query:    9 FGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            FG+RRKA+L+DIAI+TG E  + + G+ +E  +++QLG A+ V + KD T I+     + +I AR+  +K ++ ET S YD EKL ER+AKLSGGVAVIKVGAATE E++D+KLRIEDA NAT AA+EEGIV GGG  L+   D + ++KD  E  +  +G +IV++AL AP   IA N              S    G++A  +KY NM++ G+IDPAKVTR A+
Sbjct:  279 FGDRRKAILEDIAILTGGEVISEEKGMKLEEATIQQLGKAKTVKVTKDLTVIVDGGGEQKDISARVNSIKAQIEETTSDYDKEKLQERLAKLSGGVAVIKVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTILL---DIIESMKDFNETGEIAMGIEIVKRALEAPIKQIAENCGLNGGVVLEKVRMSPKGFGFDAKNEKYVNMIECGIIDPAKVTRAAI 501          
The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CAMJJ1.458e-5251.0960 kDa chaperonin OS=Campylobacter jejuni subsp. j... [more]
CH60_CAMJE1.458e-5251.0960 kDa chaperonin OS=Campylobacter jejuni GN=groL ... [more]
CH60_CAMJ81.458e-5251.0960 kDa chaperonin OS=Campylobacter jejuni subsp. j... [more]
CH60_BUCAP1.458e-5246.7060 kDa chaperonin OS=Buchnera aphidicola subsp. Sc... [more]
CH603_ACAM11.458e-5248.4660 kDa chaperonin 3 OS=Acaryochloris marina (strai... [more]
CH601_BRASB1.458e-5248.6860 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ... [more]
CH60_TERTT1.904e-5248.2560 kDa chaperonin OS=Teredinibacter turnerae (stra... [more]
CH60_RICCK1.904e-5248.6860 kDa chaperonin OS=Rickettsia canadensis (strain... [more]
CH60_PSEA71.904e-5246.7060 kDa chaperonin OS=Pseudomonas aeruginosa (strai... [more]
CH60_FUSNP1.904e-5248.6760 kDa chaperonin OS=Fusobacterium nucleatum subsp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002H20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bp
AGGTTGGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATT
GTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAA
CACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGG
ACTCCACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCT
AGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGA
CTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTG
TTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTC
CGTATTGAAGATGCCAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTAT
TGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTG
CTATCAAGGACAAGCTTGAAGATGCAGATGAGCGATTAGGTGCTGACATT
GTGCAGAAGGCACTGGTAGCACCTGCATCACTGATAGCTCACAATGCTGG
AGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGA
CTGGTTACAATGCAATGACAGACAAGTATGAGAACATGCTTCAGGCTGGA
GTTATTGATCCTGCAAAGGTGACAAGATGTGCATTGC
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