CN186176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CAMJJ (60 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=groL PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52 Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG E + +LG +E+ +++ LG A V I KD+TTI+ A K I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+ K KL+ DE +GA IV++AL AP IA NA ++ + TG++A +Y NML++G+IDP KV R AL Sbjct: 279 GFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CAMJE (60 kDa chaperonin OS=Campylobacter jejuni GN=groL PE=1 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52 Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG E + +LG +E+ +++ LG A V I KD+TTI+ A K I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+ K KL+ DE +GA IV++AL AP IA NA ++ + TG++A +Y NML++G+IDP KV R AL Sbjct: 279 GFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CAMJ8 (60 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=groL PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52 Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG E + +LG +E+ +++ LG A V I KD+TTI+ A K I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+ K KL+ DE +GA IV++AL AP IA NA ++ + TG++A +Y NML++G+IDP KV R AL Sbjct: 279 GFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BUCAP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=groL PE=3 SV=3) HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52 Identity = 106/227 (46.70%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDI+I+TG + +L + +E +++E LG A++V I KD+TTII + K IQ+RI Q+++E+ E S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++ + ++ E D+ +G + +A+ AP I N+ D + GYNA TD+Y +M+ G++DP KVTR AL Sbjct: 280 GFGDRRKAMLQDISILTGGSVISEELAMDLEKSTLEDLGQAKRVVINKDTTTIIGGSGEKQAIQSRIGQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKISNLRGHNE--DQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNNVKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH603_ACAM1 (60 kDa chaperonin 3 OS=Acaryochloris marina (strain MBIC 11017) GN=groL3 PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52 Identity = 110/227 (48.46%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK LL DIA++TG + + D GL +EN ++E +G AR+V I KD TT+I+++ ++ ++AR Q+ + + ETDS ++ EKL ER+A+LSGGVAVIKVGAATETE++DRKL++EDA NAT AA+EEGIVPGGG LVHL+ + + DE +GA I+ ++L AP I NA + TGY+A+ ++Y +M AG++DPAKVT L Sbjct: 280 GFGDRRKDLLADIAVLTGGQVISEDTGLTLENATLEMMGRARQVVITKDHTTLISES-NEAAVKARCEQIHRLIDETDSSFEKEKLHERLAQLSGGVAVIKVGAATETEMKDRKLKLEDAINATQAAVEEGIVPGGGTTLVHLAPQLEDWSAEHLVGDELIGAMILVRSLSAPLRQIVENAGLNGGVVVEQVKTLPFNTGYDALNNQYVDMFTAGIVDPAKVTSAGL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52 Identity = 111/228 (48.68%), Postives = 157/228 (68.86%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + + DLG+ +EN +++ LG A+KV I K++TTI+ A K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+ V I + ++D + G +IV KAL AP IA NA + + T G++A ++ Y +M+ G+IDPAKV R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGQLISDDLGMKLENVTIKMLGRAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRITN--PNSDVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIIDPAKVVRTAL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_TERTT (60 kDa chaperonin OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=groL PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52 Identity = 110/228 (48.25%), Postives = 158/228 (69.30%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDIAI+TG + ++GL +E+ ++E LG A++ T+ K+++ I+ A S D+I+AR+ Q++K++ ET S YD+EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG +L+ V AI D + E+ D+ G I ++A+ AP I NA E GYNA + Y +ML+ G++DPAKVTR AL Sbjct: 280 GFGDRRKAMLQDIAILTGGTVISEEVGLDLESATLEHLGQAKRFTMSKENSVIVDGAGSADDIKARVNQIRKQIEETSSEYDAEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVSLMRA---VAAIADLQGENEDQTAGVAIARRAMEAPLRQIVTNAGEEASVVAEKVRGGEGNFGYNAGSGVYGDMLEMGILDPAKVTRTAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_RICCK (60 kDa chaperonin OS=Rickettsia canadensis (strain McKiel) GN=groL PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52 Identity = 111/228 (48.68%), Postives = 154/228 (67.54%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+++DIAI+T E DLG+ +EN S++ LGTA++VTI K++T I+ + K I+ R+ Q+K ++AET S YD EKL ER+AKLSGGVAV+KVG ATE E+++RK R+EDA AT AA+EEG+V GGG L+H S + K K+E+ D++ G +IV +AL P I NA + + G+NA +Y +M+QAG+IDPAKV R AL Sbjct: 280 GFGDRRKAMMEDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGSGDKKSIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHTSQIL--TKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNFGFNAQDMQYVDMIQAGIIDPAKVVRTAL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_PSEA7 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain PA7) GN=groL PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52 Identity = 106/227 (46.70%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDIAI+TG + ++GL +E ++E LG A++V I K++TTII A + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV + +K ++ ++ +G ++++A+ AP I NA G+NA T Y +M++ G++DPAKVTR AL Sbjct: 280 GFGDRRKAMLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEEQNVGIALLRRAVEAPLRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_FUSNP (60 kDa chaperonin OS=Fusobacterium nucleatum subsp. polymorphum GN=groL PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52 Identity = 110/226 (48.67%), Postives = 151/226 (66.81%), Query Frame = 3 Query: 9 FGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 FG+RRKA+L+DIAI+TG E + + G+ +E +++QLG A+ V + KD T I+ + +I AR+ +K ++ ET S YD EKL ER+AKLSGGVAVIKVGAATE E++D+KLRIEDA NAT AA+EEGIV GGG L+ D + ++KD E + +G +IV++AL AP IA N S G++A +KY NM++ G+IDPAKVTR A+ Sbjct: 279 FGDRRKAILEDIAILTGGEVISEEKGMKLEEATIQQLGKAKTVKVTKDLTVIVDGGGEQKDISARVNSIKAQIEETTSDYDKEKLQERLAKLSGGVAVIKVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTILL---DIIESMKDFNETGEIAMGIEIVKRALEAPIKQIAENCGLNGGVVLEKVRMSPKGFGFDAKNEKYVNMIECGIIDPAKVTRAAI 501 The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bpback to top |