CN186176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_SCAIO (60 kDa chaperonin OS=Scardovia inopinata GN=groL PE=3 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 114/227 (50.22%), Postives = 151/227 (66.52%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQD+AI+TGA+ + +LGL +++ G A KV + KD TTI++ A SK+++ AR+AQ++ E+ ++DS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA AAIEEG++PGGG ALV + V K+ + DE GA IV +A+ AP IA NA +G NA T +YE++L AGV DP KVTR AL Sbjct: 278 GFGDRRKAMLQDMAILTGAQVVSDELGLKLDSIDDTVFGHASKVIVSKDETTIVSGAGSKEDVAARVAQIRSEIEDSDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAAADVQ--KNVKLEGDEATGAGIVFRAIEAPLKQIAQNAGFSGEVVIDKVRTLPAGSGLNAATGEYEDLLSAGVTDPVKVTRSAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_PSEP1 (60 kDa chaperonin OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=groL PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 107/228 (46.93%), Postives = 157/228 (68.86%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDIA++TG + + ++GL +E ++E LG A++V + K++TTII A + EI+AR+ Q++ ++ ET S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R+EDA +AT AA+EEG+VPGGG ALV + AI D K ++ D+ +G ++++A+ +P I NA GYNA T +Y +M++ G++DPAKVTR AL Sbjct: 280 GFGDRRKAMLQDIAVLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRA---LAAIVDLKGDNEDQNVGIALLRRAVESPLRQITANAGDEPSVVADKVKQGSGNFGYNAATGEYGDMIEMGILDPAKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_GEOMG (60 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groL PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 107/227 (47.14%), Postives = 156/227 (68.72%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIA++TG + + +LG +EN + + LGTA++VTI KD+TTII S+ +IQ R+ Q++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATETE++++K R+EDA +AT AA++EGIVPGGG A + + A++ A+++ G ++++AL P IA NA + + G+NA D+Y +M+ AG+IDP KV+R AL Sbjct: 279 GFGDRRKAMLEDIAVLTGGKVISEELGFKLENATFDMLGTAKRVTIDKDNTTIIDGDGSEADIQGRVKQIRAQIEETSSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALHATRAAVDEGIVPGGGVAYIR---SLGALEGISLPAEQQFGVTLIKRALEEPIRQIAQNAGVDGSIVVDKVKNGKDAFGFNAADDEYVDMIAAGIIDPTKVSRSAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CLONN (60 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groL PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 109/227 (48.02%), Postives = 156/227 (68.72%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK +L+DIAI+TG E + ++G +++ +++ LGTA V I K++TTI+ +K+ I R+ Q+++++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA AT AA+EEGIV GGG A + V + D ++A+ RLG I+++AL P IA NA +SE G++A+ +Y NM+Q G++DPAKVTR AL Sbjct: 278 GFGDRRKEMLRDIAILTGGEVISEEVGRELKDVTLDMLGTAESVKISKENTTIVNGKGNKEVIADRVGQIRRQIEETSSEFDKEKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALAATKAAVEEGIVAGGGTAYLRAIKEVEKLTD--DNAEVRLGIAIIRRALEEPVRQIAANAGLEGSVIIDKIKNSEDGIGFDALEGEYTNMMQKGIVDPAKVTRSAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CLOK5 (60 kDa chaperonin OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=groL PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 113/228 (49.56%), Postives = 150/228 (65.79%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK +LQDIAI+T + + +LG ++ S+E LG A V I K++TTI+ K IQ R++Q+K ++ ET S +D EKL ER+AKLSGGVAVIKVGAATETEL+++K+RIEDA AT A +EEG+ PGGG A V+ +P + D AD ++G DI+ KAL P IA NA +SE GY+ +TDKY NM+ G++DP KVTR AL Sbjct: 278 GFGDRRKEMLQDIAILTDGKVISEELGRDLKEVSLEDLGRAESVKIDKENTTIVNGRGDKKSIQDRVSQIKAQIEETTSEFDKEKLQERLAKLSGGVAVIKVGAATETELKEKKMRIEDALAATKAGVEEGMGPGGGTAYVNA---IPEVSKLTSDVADVKVGIDIITKALEEPVRQIAANAGVEGSVIIEKVKNSEPGVGYDVLTDKYVNMIDNGIVDPTKVTRSAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CLOK1 (60 kDa chaperonin OS=Clostridium kluyveri (strain NBRC 12016) GN=groL PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 113/228 (49.56%), Postives = 150/228 (65.79%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK +LQDIAI+T + + +LG ++ S+E LG A V I K++TTI+ K IQ R++Q+K ++ ET S +D EKL ER+AKLSGGVAVIKVGAATETEL+++K+RIEDA AT A +EEG+ PGGG A V+ +P + D AD ++G DI+ KAL P IA NA +SE GY+ +TDKY NM+ G++DP KVTR AL Sbjct: 278 GFGDRRKEMLQDIAILTDGKVISEELGRDLKEVSLEDLGRAESVKIDKENTTIVNGRGDKKSIQDRVSQIKAQIEETTSEFDKEKLQERLAKLSGGVAVIKVGAATETELKEKKMRIEDALAATKAGVEEGMGPGGGTAYVNA---IPEVSKLTSDVADVKVGIDIITKALEEPVRQIAANAGVEGSVIIEKVKNSEPGVGYDVLTDKYVNMIDNGIVDPTKVTRSAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CLOBO (60 kDa chaperonin OS=Clostridium botulinum GN=groL PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 109/227 (48.02%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK +L+DIAI+TG E + +LG I++ +++ LGTA + + K++TTI+ SK EI+ RI Q+K+++ ET S +D EKL ER+AK++GGVAV+KVGAATETEL++RKLRIEDA AT AA+EEGIV GGG A + V + D +++ RLG I+++AL P IA NA + + G++A+ +Y NM+Q G++DPAKVTR AL Sbjct: 278 GFGDRRKEMLRDIAILTGGEVISEELGREIKDVTLDMLGTAESIKVTKENTTIVNGKGSKAEIEDRIGQIKRQIEETTSEFDKEKLQERLAKIAGGVAVVKVGAATETELKERKLRIEDALAATKAAVEEGIVAGGGTAYLRAIKEVEKLTD--NNSEIRLGIAIIRRALEEPVRQIASNAGLEGSVIIDKIMNGQEGMGFDALEGEYVNMVQKGIVDPAKVTRSAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BUCMP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Myzus persicae GN=groL PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 106/227 (46.70%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDI+I+TG + +L + +E +++E LG A++V I KD+TTII K IQ+RI+Q+++E+ E S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++ ++ + E D+ +G + +A+ AP I N+ D + GYNA TD+Y +M+ G++DP KVTR AL Sbjct: 280 GFGDRRKAMLQDISILTGGSVISEELAMELEKSTLEDLGQAKRVVISKDTTTIIGGVGEKHTIQSRISQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKTSNLRGQNE--DQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNNVKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BLOPB (60 kDa chaperonin OS=Blochmannia pennsylvanicus (strain BPEN) GN=groL PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 107/228 (46.93%), Postives = 154/228 (67.54%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDIA++T + ++GL +E ++E +G A++V I KD+TTII +K I +R+AQ+ ++ E S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG AL+ +++ AI++ D D+ +G + ++A+ AP I NA E TGYNA T+KY NM++ G++DP KVTR AL Sbjct: 280 GFGDRRKAMLQDIAVLTAGTVISEEIGLELEKATLEDMGQAKRVVITKDATTIIDGVGNKSAINSRVAQINQQRDEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVAN---AIRNLCGDNEDQNVGIKVARRAMEAPLRQIMANAGEEPSVIANNVRSGEGNTGYNAATEKYGNMIELGILDPTKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 110/228 (48.25%), Postives = 156/228 (68.42%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + DLG+ +E+ +++ LG A+KV+I K++TTI+ A K +I+ R+AQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K RI+DA NAT AA++EGIVPGGG AL+ S + K E+ D+ G +IV++AL +PA I NA + + GYNA T +Y +M+ G+IDP KV R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITV---KGENDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTAL 504 The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bpback to top |