CN186176

Overview
NameCN186176
Unique NameCN186176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_PSEA8 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain LESB58) GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 105/227 (46.26%), Postives = 155/227 (68.28%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDIAI+TG    + ++GL +E  ++E LG A++V I K++TTII  A  + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV     +  +K   ++ ++ +G  ++++A+ +P   I  NA                  G+NA T  Y +M++ G++DPAKVTR AL
Sbjct:  280 GFGDRRKAMLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSAL 504          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_OCHA4 (60 kDa chaperonin OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 110/228 (48.25%), Postives = 158/228 (69.30%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+L+DIAI+TG +  + DLG+ +E  +++ LG A+KV+I K++TTI+  A  K EI AR++Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++AL APA  I  NA            + +  T GYN    ++ ++++AGV+DP KV R AL
Sbjct:  280 GFGDRRKAMLEDIAILTGGQVISEDLGIKLETVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVSQIKQQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASAKISA---KGINADQEAGINIVRRALQAPARQITTNAGEEASVIVGKILENASETYGYNTANGEFGDLIKAGVVDPVKVVRTAL 504          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_FLAJ1 (60 kDa chaperonin OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 111/228 (48.68%), Postives = 154/228 (67.54%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+L+DIAI+TG    + + G  +ENT++E LG A++V+I KD+TTI++ A   D I+ R+ Q+K ++  T S YD EKL ER+AKL+GGVAV+ VGAA+E E++++K R++DA +AT AA+EEGIV GGG AL+       A+ D K ++ADE  G  IV +A+ AP   I  NA            +     GYNA TD+Y +ML+AG+IDP KVTR AL
Sbjct:  280 GFGDRRKAMLEDIAILTGGTVISEERGYTLENTTIEMLGNAKRVSIDKDNTTIVSGAGEADIIKNRVNQIKGQMETTTSDYDKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALLRAK---LALADLKADNADEATGIQIVSRAIEAPLRTIVENAGLEGSVVVAKVAEGSGDFGYNAKTDEYVDMLKAGIIDPKKVTRVAL 504          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CYACA (60 kDa chaperonin, chloroplastic OS=Cyanidium caldarium GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 112/227 (49.34%), Postives = 155/227 (68.28%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+R+KALL+DIAI+T  +  + + GL +E  +++ LG AR+ TI +DSTTI+ D  ++  + AR  QLK +L    S Y+ EKL ER+AKL GGVAVIKVGAATETE++++KLR+ED+ NAT AAIEEGIVPGGG ALVH+S ++         +DE LGA+IV++A +AP   IA N+               +  GY+A+++   +M  AG+IDPAKVTR A+
Sbjct:  280 GFGDRKKALLEDIAILTNGQVISEETGLNLETITLDVLGQARRATILRDSTTIVEDK-NQQAVHARCEQLKNQLLIAKSSYEKEKLQERLAKLIGGVAVIKVGAATETEMKEKKLRLEDSINATKAAIEEGIVPGGGTALVHISANLKQWAKINLSSDELLGANIVEQASLAPLHKIAENSGKNGSLIVEALEHKNFEIGYDALSNSLVDMYDAGIIDPAKVTRSAI 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_COXBU (60 kDa chaperonin OS=Coxiella burnetii GN=groL PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 103/228 (45.18%), Postives = 158/228 (69.30%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ +   + ++  ++E+ D+R+G +I ++A+  P S I  N             +  +   GYNA T +Y +M++ G++DP KVTR AL
Sbjct:  280 GFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSV--EVENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTAL 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_COXBR (60 kDa chaperonin OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 103/228 (45.18%), Postives = 158/228 (69.30%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ +   + ++  ++E+ D+R+G +I ++A+  P S I  N             +  +   GYNA T +Y +M++ G++DP KVTR AL
Sbjct:  280 GFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSV--EVENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTAL 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_COXBN (60 kDa chaperonin OS=Coxiella burnetii (strain Dugway 5J108-111) GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 103/228 (45.18%), Postives = 158/228 (69.30%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ +   + ++  ++E+ D+R+G +I ++A+  P S I  N             +  +   GYNA T +Y +M++ G++DP KVTR AL
Sbjct:  280 GFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSV--EVENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTAL 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_COXB2 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuG_Q212) GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 103/228 (45.18%), Postives = 158/228 (69.30%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ +   + ++  ++E+ D+R+G +I ++A+  P S I  N             +  +   GYNA T +Y +M++ G++DP KVTR AL
Sbjct:  280 GFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSV--EVENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTAL 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_COXB1 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuK_Q154) GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 103/228 (45.18%), Postives = 158/228 (69.30%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ +   + ++  ++E+ D+R+G +I ++A+  P S I  N             +  +   GYNA T +Y +M++ G++DP KVTR AL
Sbjct:  280 GFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSV--EVENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTAL 505          
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BUCTC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Tetraneura caerulescens GN=groL PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 106/227 (46.70%), Postives = 156/227 (68.72%), Query Frame = 3
Query:    6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686
            GFG+RRKA+LQDI+I+T     + +L + +E +++E LG +++V I KD+TTII  + SK +I+ RI+Q+K+++ E+ S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV ++  +  I  + E  D+ +G  +  +A+ AP   I  N+            D     GYNA TD+Y +M++ G++DP KVTR AL
Sbjct:  280 GFGDRRKAMLQDISILTAGTLISEELAMDLEKSTLEDLGQSKRVVITKDTTTIIDGSGSKKDIKNRISQIKQQIQESTSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVAQKISKILGQNE--DQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNNVKDGIGNYGYNAATDEYGDMIKFGILDPTKVTRSAL 504          
The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_PSEA84.243e-5246.2660 kDa chaperonin OS=Pseudomonas aeruginosa (strai... [more]
CH60_OCHA44.243e-5248.2560 kDa chaperonin OS=Ochrobactrum anthropi (strain... [more]
CH60_FLAJ14.243e-5248.6860 kDa chaperonin OS=Flavobacterium johnsoniae (st... [more]
CH60_CYACA4.243e-5249.3460 kDa chaperonin, chloroplastic OS=Cyanidium cald... [more]
CH60_COXBU4.243e-5245.1860 kDa chaperonin OS=Coxiella burnetii GN=groL PE=... [more]
CH60_COXBR4.243e-5245.1860 kDa chaperonin OS=Coxiella burnetii (strain RSA... [more]
CH60_COXBN4.243e-5245.1860 kDa chaperonin OS=Coxiella burnetii (strain Dug... [more]
CH60_COXB24.243e-5245.1860 kDa chaperonin OS=Coxiella burnetii (strain Cbu... [more]
CH60_COXB14.243e-5245.1860 kDa chaperonin OS=Coxiella burnetii (strain Cbu... [more]
CH60_BUCTC4.243e-5246.7060 kDa chaperonin OS=Buchnera aphidicola subsp. Te... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002H20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bp
AGGTTGGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATT
GTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAA
CACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGG
ACTCCACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCT
AGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGA
CTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTG
TTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTC
CGTATTGAAGATGCCAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTAT
TGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTG
CTATCAAGGACAAGCTTGAAGATGCAGATGAGCGATTAGGTGCTGACATT
GTGCAGAAGGCACTGGTAGCACCTGCATCACTGATAGCTCACAATGCTGG
AGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGA
CTGGTTACAATGCAATGACAGACAAGTATGAGAACATGCTTCAGGCTGGA
GTTATTGATCCTGCAAAGGTGACAAGATGTGCATTGC
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