CN186176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BUCBP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=groL PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52 Identity = 106/227 (46.70%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDI+I+T + +L + +E +++E LG A++V I KD+TTII K IQ+RI+Q+++++ E S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV ++ + I + E D+ +G + +A+ AP I N+ D + GYNA TD+Y +M+ G++DP KVTR AL Sbjct: 280 GFGDRRKAMLQDISILTSGSVISEELAMELEKSTLEDLGQAKRVVINKDTTTIIGGIGEKYNIQSRISQIRQQIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVAAKISNIVGQNE--DQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNNVKDGKGNYGYNAATDEYGDMISFGILDPTKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BEII9 (60 kDa chaperonin OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=groL PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52 Identity = 105/229 (45.85%), Postives = 162/229 (70.74%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + +LG+ +EN ++ LG A+++ I K++TTII A +KD+I+ RI+Q+K ++AET S YD EK+ ER+AKL+GGVAV++VG +TE E++++K R++DA NAT AA+EEG+ PGGG AL+ + A+++ +++D++ G +IV+KA+ PA I N+ +S E+ GYNA T +Y +M++ G+IDP KV R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGTLISEELGIKLENVTLAMLGRAKRIRIDKEATTIIDGAGNKDDIEGRISQIKAQIAETTSDYDREKMQERLAKLAGGVAVLRVGGSTEVEVKEKKDRVDDALNATRAAVEEGVSPGGGVALLRA---IKALENLPTDNSDQKAGIEIVRKAIQTPAKQIVDNSGGDGAVVVGKLLESNEYAFGYNAQTGEYGDMVKLGIIDPTKVVRTAL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BARBK (60 kDa chaperonin OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=groL PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52 Identity = 106/228 (46.49%), Postives = 157/228 (68.86%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIA++T + + D+G+ +EN ++E LG A+KV + K++TTI+ A K EI AR++Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA NAT AA+EEGIVPGGG AL+ + A+ K ++ D+ G I+++AL APA IAHNA ++ T GYN T ++ +++ G++DP KV R AL Sbjct: 280 GFGDRRKAMLEDIAVLTSGQVISEDVGIKLENVTLEMLGRAKKVHVSKETTTIVDGAGQKSEINARVSQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALLRAA---KALSIKGKNPDQEAGIGIIRRALQAPARQIAHNAGEEAAVIVGKVLENCSDTFGYNTATAQFGDLISFGIVDPVKVVRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BACST (60 kDa chaperonin OS=Bacillus stearothermophilus GN=groL PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52 Identity = 111/227 (48.90%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG E + +LG +++ ++ LG A KV + K++TTI+ A I+ARI Q++ +L ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG AL+++ V AI+ + DE G IV +A+ P IA A + G+NA T ++ +M++AG++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAILTGGEVISEELGRELKSATIASLGRASKVVVTKENTTIVEGAGDSKRIKARINQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNVYSKVAAIE---AEGDEATGVKIVLRAIEEPVRQIAQTAGLEGSIIVERLKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH604_RHIME (60 kDa chaperonin 4 OS=Rhizobium meliloti GN=groL4 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52 Identity = 110/228 (48.25%), Postives = 155/228 (67.98%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + DLG+ +E+ +++ LG A+KV+I K++TTI+ A K +I+ R+AQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K RI+DA NAT AA++EGIVPGGG AL+ S + K E+ D+ G +IV++AL +PA I NA + GYNA T +Y +M+ G+IDP KV R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITV---KGENDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKNTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH603_BURCM (60 kDa chaperonin 3 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL3 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52 Identity = 107/227 (47.14%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TGA + + G ++ S+E LG+A++V +RK+ T II A ++ I+AR+ ++ ++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R++DA +AT AA+EEGIVPGGG AL+ ++K ++D+ G IV +AL AP +IA NA + + GYNA T +Y ++++AGV+DP KVTR AL Sbjct: 280 GFGDRRKAMLEDIAILTGATVISEETGKQLQKASLEDLGSAKRVEVRKEDTIIIDGAGDQERIEARVKSIRTQIDETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSTATSLKG--ANSDQDAGIQIVLRALEAPLRVIASNAGDEPSVVIAKVLEGKGNFGYNAATGEYGDLVEAGVVDPTKVTRTAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52 Identity = 109/228 (47.81%), Postives = 158/228 (69.30%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG A +LGL +E +++ LG A++VT+ KD+TTI+ A K++I+AR+ ++ ++ ET S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA +AT AA+EEGIVPGGG A + V A++ + E++G DIV++A+ P I+ N ++ E G+NA T +YE++++AGVIDP KV+R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGRMIAEELGLKLEQVTLKDLGRAKRVTVDKDNTTIVDGAGKKEDIEARVKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRC---VKALEGVKVNEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH601_RHIME (60 kDa chaperonin 1 OS=Rhizobium meliloti GN=groL1 PE=2 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52 Identity = 110/228 (48.25%), Postives = 155/228 (67.98%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + DLG+ +E+ +++ LG A+KV+I K++TTI+ A K +I+ R+AQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K RI+DA NAT AA++EGIVPGGG AL+ S + K E+ D+ G +IV++AL +PA I NA + GYNA T +Y +M+ G+IDP KV R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITV---KGENDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKNTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_TSUPA (60 kDa chaperonin OS=Tsukamurella paurometabola GN=groL PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.541e-52 Identity = 114/227 (50.22%), Postives = 149/227 (65.64%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQD+AI+TG + + ++GL +E +E LG AR+V + KD TTI+ A SK++I+ R++Q++ E+ +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA AA+EEGIV GGGAAL + + DE GA+IV+ AL AP IA NA +S TG NA T YE++L AG+ DP KVTR AL Sbjct: 278 GFGDRRKAMLQDMAILTGGQVISEEVGLSLETAGLELLGQARQVVVTKDETTIVDGAGSKEQIEGRVSQIRAEIESSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGAALAQSGKVFETLN---LEGDEATGANIVKVALDAPVKQIAINAGLEPGVVAEKVRNSPAGTGLNAATGVYEDLLAAGINDPVKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_STRTD (60 kDa chaperonin OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=groL PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.541e-52 Identity = 113/227 (49.78%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIA++TGA DLGL +++ ++E LG A KVT+ KDST I+ A S + I R+ +K +L T S +D EKL ER+AKLSGGVAVIKVGAATET L++ KLRIEDA NAT AA+EEGIV GGG ALV++ + + + + D+ G +IV +AL P IA+NA +S TG+NA ++ +M+++G+IDP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAVLTGATVITEDLGLELKDATMESLGQASKVTVDKDSTVIVEGAGSAEAIANRVNLIKSQLETTTSEFDREKLQERLAKLSGGVAVIKVGAATETALKEMKLRIEDALNATRAAVEEGIVAGGGTALVNV---IAKVAELDLEGDDATGRNIVLRALEEPVRQIAYNAGYEGSVIIDKLKNSPVGTGFNAANGEWVDMVESGIIDPVKVTRSAL 501 The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bpback to top |