CN186176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.541e-52 Identity = 110/228 (48.25%), Postives = 157/228 (68.86%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+T + DLG+ +EN ++ LG A+KV I K++TTII A SK E+ R AQ++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+ + +I K + D+R+G DIV++A+ AP IA NA + S+++ G+NA T +Y ++ GVIDPAKV R AL Sbjct: 280 GFGDRRKAMLEDIAILTAGTVISEDLGIKLENVTLNMLGRAKKVAIEKENTTIIDGAGSKAELDGRTAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSI--KTANDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTAL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH601_SYNAS (60 kDa chaperonin 1 OS=Syntrophus aciditrophicus (strain SB) GN=groL1 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.541e-52 Identity = 108/227 (47.58%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + + +LG+ +++ ++ LGT +++ I KD+TTI+ A S+ +I+ R+ Q++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+ +PA+ DER G +IV++A+ P IA NA ++ G+NA T+KY +M++AG+IDP KV R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGKVVSEELGIKLDSITLTDLGTCKRLHITKDNTTIVDGAGSQADIEGRVKQIRTQIEETTSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRT---LPALAGMDLPDDERPGLNIVKRAVEEPMRQIAANAGFEGSIVVEKVKENTGNFGFNADTEKYVDMMEAGIIDPTKVVRFAL 503
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH601_FRAAA (60 kDa chaperonin 1 OS=Frankia alni (strain ACN14a) GN=groL1 PE=3 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 5.541e-52 Identity = 114/228 (50.00%), Postives = 152/228 (66.67%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKL-EDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKALLQDIA++TG + AG++GL ++ ++ LG AR+V + K++TTI+ D + R+ QLK E+ +DS +D EKL ER+AKL+GGVAVI+VGAATE EL+++K R+EDA +AT AAIEEGIV GGGAAL H++ + D L DE G IV+ AL AP + IA NA D GYNA T +Y +++ AGVIDP KVTR A+ Sbjct: 278 GFGDRRKALLQDIAVLTGGQVVAGEVGLSLDAVTLADLGRARRVVVDKENTTIVDGGGEADAVADRVRQLKAEIETSDSDWDREKLQERLAKLAGGVAVIRVGAATEVELKEKKHRLEDAVSATRAAIEEGIVAGGGAALAHVTS---VLDDGLGRTGDELAGVRIVRTALDAPLNWIARNAGLEGAVIVARVKDLAPGHGYNAATGEYTDLIAAGVIDPVKVTRSAV 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_NITEU (60 kDa chaperonin OS=Nitrosomonas europaea GN=groL PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52 Identity = 109/227 (48.02%), Postives = 150/227 (66.08%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG A ++GL +E T +E LG A+++ + K++TTII A I+AR+AQ++K++ E S YD EKL ER+AKL+GGVA+IKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+ + V IK D D G IV +A+ P I N + + T GYNA T +Y +++ GV+DP KVTR AL Sbjct: 280 GFGDRRKAMLEDIAILTGGTVIAEEVGLSLEKTRLEDLGQAKRIEVGKENTTIIDGAGDVKTIEARVAQIRKQIEEASSDYDREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRTINAVSKIKGDNHDQDS--GIKIVLRAMEEPLRQIVTNCGDEASVVVNKVKEGQGTFGYNAATGEYGDLVAMGVLDPTKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_METFK (60 kDa chaperonin OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=groL PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52 Identity = 109/227 (48.02%), Postives = 152/227 (66.96%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG A ++GL +E ++E LG A++V I K++TTII A S++ I+ RI Q+KK++ + S YD EKL ER+AKL+GGVAVIKVGAATETE++++K R+EDA +AT AA+EEGIVPGGG AL+ + +K ++ D+ G IV +A+ P I NA + GYNA Y ++++ GV+DPAKVTR AL Sbjct: 280 GFGDRRKAMLEDIAILTGGTVIAEEVGLSLEKVTLENLGQAKRVEIGKENTTIIDGAGSENNIKVRIDQIKKQIEDATSDYDREKLQERVAKLAGGVAVIKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARSSIKELKG--DNPDQDAGIKIVLRAIEEPLRQIVANAGDEPSVVVNKVLEGTGNYGYNASNGTYGDLVELGVLDPAKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_MARMM (60 kDa chaperonin OS=Maricaulis maris (strain MCS10) GN=groL PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52 Identity = 109/228 (47.81%), Postives = 157/228 (68.86%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+D+AI+TG + + DLG+ +E +++ LG+A++V I KD TTI+ K +I+AR+ Q++++ ET S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA NAT AA+EEGIVPGGG AL+ S + ++ ++AD+ G IV +AL +P IA N+ ++ T G+NA T++Y +ML GVIDPAKV R AL Sbjct: 280 GFGDRRKAMLEDLAILTGGQVISEDLGIKLETVTLDMLGSAKRVNITKDDTTIVDGVGDKAQIEARVTQIRRQSEETTSDYDREKLQERLAKLAGGVAVIKVGGATEIEVKEKKDRVDDALNATRAAVEEGIVPGGGVALLKASAKLAGLEG--DNADQTQGIAIVARALQSPIRQIATNSGVEGSIVVGKVMENPSATFGFNAQTEEYGDMLAFGVIDPAKVVRTAL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52 Identity = 105/228 (46.05%), Postives = 159/228 (69.74%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + + D+G+ +E+ ++E LG A+K+ I K++TTI+ A + D+I+ R Q++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E+++RK R++DA +AT AA+EEGIVPGGG AL S + + ++ D+R+G +IV+KAL AP IA NA ++E + G++A +Y++++ AG+IDP KV R AL Sbjct: 280 GFGDRRKAMLEDIAILTGGQVISEDIGIKLESVTLEMLGRAKKIHIEKENTTIVEGAGNSDDIKGRCNQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASSALKGL--TFDNDDQRVGGEIVRKALQAPLRQIAFNAGEDGAVIAGKVLENEGYVFGFDAQKGEYKDLVAAGIIDPTKVVRTAL 505
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CYTH3 (60 kDa chaperonin OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=groL PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52 Identity = 105/227 (46.26%), Postives = 149/227 (65.64%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + + G +EN ++E LGTA K+ I KD+TT++ + KD I AR+ Q+K ++ T S YD EKL ER+AKLSGGVA++ +GAATE E++++K R++DA +AT AA+EEGIVPGGG AL+ + + + DE+ G I++ A+ +P I +NA + GYNA D+YE M+ AG+IDP KVTR AL Sbjct: 279 GFGDRRKAMLEDIAILTGGTVISEESGYKLENATLEYLGTAEKINIDKDNTTVVNGSGLKDNIVARVNQIKSQMENTTSDYDREKLQERLAKLSGGVAIMYIGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALIRAGAALDNV--AFHNEDEKTGIQIIRTAIESPLRAIVYNAGLEGSVIVQKVKEGTGDYGYNAREDRYEAMIAAGIIDPTKVTRLAL 503
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CLOTE (60 kDa chaperonin OS=Clostridium tetani GN=groL PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52 Identity = 110/227 (48.46%), Postives = 153/227 (67.40%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK +L+DIA +TG + + ++G +++ +V+ LG A V I K++TTI+ +K EI+ R+ Q+K ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA AT AA+EEGI+PGGG A + V + E D +LG DIV+K+L P IA NA SE GY+A+ ++Y NM++AG++DP KV+R AL Sbjct: 280 GFGDRRKEMLEDIATLTGGQVISEEIGRDLKDVTVDMLGRAESVKITKETTTIVNGKGNKKEIEDRVNQIKAQIEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIIPGGGTAYAMVIKEVEKLNS--ETHDIKLGIDIVKKSLEEPVRQIACNAGVEGSIVIEKVKHSEAGIGYDALNNEYVNMIKAGIVDPTKVSRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BACFR (60 kDa chaperonin OS=Bacteroides fragilis GN=groL PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52 Identity = 110/227 (48.46%), Postives = 150/227 (66.08%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK +L+DIA++TG + + GL +E ++E LGTA KVT+ KD+TTI+ A +K+ I+ R Q+K ++A T S YD EKL ER+AKLSGGVAV+ VGAA+E E++++K R++DA AT AAIEEGIV GGG A + + + +K E+ DE G I+++A+ P I NA + + GYNA TD YENM AGV+DPAKVTR AL Sbjct: 280 GFGDRRKEMLEDIAVLTGGVVISEEKGLKLEQATIEMLGTADKVTVSKDNTTIVNGAGAKENIKERCDQIKAQIAATKSDYDREKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIVAGGGVAYIRAIESLDGLKG--ENDDETTGIAIIKRAIEEPLRQIVANAGKEGAVVVQKVSEGKGDFGYNARTDVYENMHAAGVVDPAKVTRVAL 504 The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bpback to top |