CN186176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_PELTS (60 kDa chaperonin OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.380e-57 Identity = 119/231 (51.52%), Postives = 162/231 (70.13%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIK--DKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDIAI+TG ++GL ++ +++QLG A KV ++K+ T I+ A S DEI R+AQ+KK++ ET S +D EKL ER+AKL+GGVAVI+VGAATETE++D+KLRIEDA NAT AA+EEGIVPGGG A ++ A+K D L+ DE+ G DIV++AL P IA NA +++ G+NA+T ++ NM+ AG++DPAKVTR AL Sbjct: 279 GFGDRRKAMLQDIAILTGGTVITEEVGLKLDKATIDQLGRANKVRVKKEETIIVGGAGSTDEITKRVAQIKKQIEETTSEFDKEKLQERLAKLAGGVAVIQVGAATETEMKDKKLRIEDALNATRAAVEEGIVPGGGVA------YISALKGLDGLDAGSLDEKTGIDIVRRALEEPLRQIASNAGLEGSVIVEKVKNADPGIGFNALTGEFVNMIDAGIVDPAKVTRTAL 503
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_EXIS2 (60 kDa chaperonin OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.380e-57 Identity = 118/227 (51.98%), Postives = 154/227 (67.84%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DI+IVTGAE +LGL ++ T + QLG A KV + KD+TTI+ D I AR+ ++ ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG A +H++ V +I + DE G +IV +AL AP IA NA GYNA TD+Y +M++ G++DPAKVTR AL Sbjct: 278 GFGDRRKAMLEDISIVTGAELITEELGLDLKETQITQLGRASKVVVSKDNTTIVEGNGHSDSITARVGAIRSQIEETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTAFIHVTKAVESIL-AVTTGDEATGVNIVLRALEAPLRQIAENAGQEGSVIVERLKHEAQGMGYNAATDEYVDMIETGIVDPAKVTRSAL 503
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_BACSU (60 kDa chaperonin OS=Bacillus subtilis GN=groL PE=1 SV=3) HSP 1 Score: 221.09 bits (562), Expect = 4.380e-57 Identity = 116/227 (51.10%), Postives = 159/227 (70.04%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIA++TG E DLGL +++T + QLG A KV + K++TTI+ A D+I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++ + D + G +IV +AL P IAHNA + E G+NA T ++ NM++ G++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAVLTGGEVITEDLGLDLKSTQIAQLGRASKVVVTKENTTIVEGAGETDKISARVTQIRAQVEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEEIGVGFNAATGEWVNMIEKGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_STAAR (60 kDa chaperonin OS=Staphylococcus aureus (strain MRSA252) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 116/227 (51.10%), Postives = 161/227 (70.93%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+D+AI+TGA+ DLGL +++ +++ LGTA KV + KD+TT++ ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V I+ + D G +IV KAL AP IA NA ++E G+NA T+++ NML+ G++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDLAILTGAQVITDDLGLDLKDATIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEVGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_NATTJ (60 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 113/227 (49.78%), Postives = 158/227 (69.60%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIA++TG + + D+GL ++N + LG AR+VTI KD TTI+ ++++IQ RI QL+ ++ ET S +D EKL ER+AKL+GGVAV++VGAATETE++++KLRIEDA N+T AA+EEGIV GGG AL+ D +P++++ D DE G IV++AL P +AHN+ G+NA+ + Y NML AGV+DP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAVLTGGQVISEDVGLELKNADISMLGRARQVTITKDDTTIVDGYGNEEDIQKRITQLRTQIEETTSDFDREKLEERLAKLAGGVAVVEVGAATETEMKEKKLRIEDALNSTRAAVEEGIVAGGGTALI---DVLPSLEEVQADGDESTGVSIVRRALEEPVRQLAHNSGAEGSIVAEQVKQKGTNIGFNALENDYTNMLDAGVVDPKKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACHE (60 kDa chaperonin OS=Lactobacillus helveticus GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 118/227 (51.98%), Postives = 156/227 (68.72%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA LQDIA +TG DLGL +++T ++QLG AR++T+ KDSTTI+ A SK+ I R+ ++K++ ++ S +D +KL ER+AKL+GGVAVI VGAATETEL++R+ RIEDA N+T AA++EG V GGG ALV++ V +K E DE+ G +IV +AL AP IA NA E GYNA TDK+ENM+ AG+IDP KVTR AL Sbjct: 278 GFGDRRKAQLQDIAALTGGTVITEDLGLELKDTKIDQLGQARRITVTKDSTTIVGGAGSKEAIDERVDTIRKQIEDSTSDFDKKKLQERLAKLTGGVAVIHVGAATETELKERRYRIEDALNSTRAAVDEGYVAGGGTALVNVEKAVREVKG--ETTDEQTGINIVLRALSAPVRQIAENAGKDGSVILDKLEHQENEIGYNAATDKWENMVDAGIIDPTKVTRTAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACF3 (60 kDa chaperonin OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 119/230 (51.74%), Postives = 162/230 (70.43%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE---DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA L+DIA++TG + DLG+ +++ +++QLG+A KVTI KD+TTI+ + +K+ I R+ Q+KK +AET S +D EKL ER+AKL+GGVAV+KVGAATETEL+++K RIEDA NAT AA++EG VPGGG ALV++ +PA+ D++E DE G IV+ AL AP IA NA + GYNA DK+E+M+ AG++DP KVTR AL Sbjct: 278 GFGDRRKAQLEDIAVLTGGTVISDDLGMQLKDATIDQLGSANKVTITKDATTIVDGSGNKEAIAERVDQIKKAIAETTSDFDKEKLQERLAKLAGGVAVVKVGAATETELKEKKYRIEDALNATRAAVQEGFVPGGGTALVNV---IPAL-DEVEASATGDEATGIKIVKAALEAPVRQIAENAGLEGSVIVNQLKQEKPGVGYNAADDKFEDMVAAGIVDPTKVTRSAL 503
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACAC (60 kDa chaperonin OS=Lactobacillus acidophilus GN=groL PE=3 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 123/228 (53.95%), Postives = 158/228 (69.30%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA L+DIA +TG DLG +++T ++QLG AR+VT+ KDSTTI+ A SKD I+ R ++K++ E+ S +D +KL ER+AKL+GGVAVI VGAATETEL++R+ RIEDA N+T AA++EG V GGG ALV D AIKD K E +DE+ G +IV +AL AP IA NA E GYNA TDK+ENM++AG+IDP KVTR AL Sbjct: 278 GFGDRRKAQLEDIAALTGGTVITDDLGFELKDTKIDQLGQARRVTVTKDSTTIVDGAGSKDAIKEREDSIRKQIEESTSDFDKKKLQERLAKLTGGVAVIHVGAATETELKERRYRIEDALNSTRAAVDEGYVAGGGTALV---DVEKAIKDLKGETSDEQTGINIVLRALSAPVRQIAENAGKDGAVVLNKLESQENEIGYNAATDKWENMVEAGIIDPTKVTRTAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_HALOH (60 kDa chaperonin OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 116/227 (51.10%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + DLGL +EN + LG A KVT+ K+ TTI+ A EIQ RI Q++ ++ TDS +D EKL ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEG+V GGG L+ D +PA+ + + DE G DIV+KAL AP LIA NA + G++A ++ NM+++G++DPAKVTR AL Sbjct: 279 GFGDRRKAMLEDIAILTGGQVITEDLGLKLENADISMLGRAHKVTVTKEDTTIVEGAGDSKEIQNRIKQIRTQIENTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGLVAGGGTTLI---DAIPALDELNLEGDEATGVDIVRKALEAPVRLIADNAGYEGSVIVEKVKSEDKGIGFDAYNGEFVNMIESGIVDPAKVTRSAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_EUBE2 (60 kDa chaperonin OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 113/227 (49.78%), Postives = 164/227 (72.25%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 G+G+RRK +L+DIAI+TG + + +LGL +++T+++ LG A+ V ++K++T I+ +K++I AR+AQ+K +L ET S +D EKL ER+AKL+GGVAVI+VGAATETE+++ KLR+EDA NAT AA+EEG+V GGG+A +H S V + L DE++GA I+ KAL AP IA+NA +SE TG++A ++Y NM+ AG++DPAKVTR AL Sbjct: 278 GYGDRRKEMLKDIAILTGGQVISEELGLELKDTTMDMLGRAKSVKVQKENTVIVDGEGAKEDIDARVAQIKAQLEETTSEFDKEKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGVVSGGGSAYIHASKKVAELVKTL-SGDEKIGAQIILKALEAPLFHIAYNAGLEGAVIINKVRESEVGTGFDAYKEEYVNMIDAGILDPAKVTRSAL 503 The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bpback to top |