CN186176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CHLFF (60 kDa chaperonin OS=Chlamydophila felis (strain Fe/C-56) GN=groL PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 112/227 (49.34%), Postives = 159/227 (70.04%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + + +LG+ +ENT++ LG A+KV + K+ TTI+ +K++I+AR +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG ALV + A L + DE++GA IV KAL AP IA NA GY+A+ D Y +M++AG++DP KVTRCAL Sbjct: 280 GFGDRRKAMLEDIAILTGGQLISEELGMKLENTTLSMLGKAKKVIVSKEDTTIVEGLGNKEDIEARCENIKKQIEDSTSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLARSSNEGYDALRDAYTDMIEAGILDPTKVTRCAL 506
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 220.705 bits (561), Expect = 5.721e-57 Identity = 120/231 (51.95%), Postives = 165/231 (71.43%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD----KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRK +L+DIA +TG + + D GL +E+ +V+ LG+AR++ I KD+TTI+A+ ++ +++R Q+++++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG L HL+ P ++D L+D +E GA IV +AL AP IA NA + E+ GYNA + +Y +ML AG++DPAKVTR AL Sbjct: 279 GFGDRRKQMLEDIATLTGGQVISEDAGLKLESATVDSLGSARRINITKDNTTIVAEG-NEAAVKSRCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLA---PQLEDWATGNLKD-EELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKEFNVGYNAASLEYVDMLAAGIVDPAKVTRSAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_CLOTH (60 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groL PE=1 SV=3) HSP 1 Score: 220.32 bits (560), Expect = 7.471e-57 Identity = 118/227 (51.98%), Postives = 159/227 (70.04%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIAI+TG + DLGL +++T+VEQLG AR+V ++K++T I+ A EIQ RIA +K ++ ET S +D EKL ER+AKL+GGVAVI+VGAATETE++++KLRIEDA AT AA+EEGIV GGG ALV++ V + D + DE+ G I+ +AL P IA NA SE G++A +KY NM++AG++DPAKVTR AL Sbjct: 278 GFGDRRKAMLEDIAILTGGQVITSDLGLELKDTTVEQLGRARQVKVQKENTIIVDGAGDPKEIQKRIASIKSQIEETTSDFDREKLQERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALAATKAAVEEGIVAGGGTALVNVIPKVAKVLDTV-SGDEKTGVQIILRALEEPVRQIAENAGLEGSVIVEKVKASEPGIGFDAYNEKYVNMIEAGIVDPAKVTRSAL 503
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_STAEP (60 kDa chaperonin OS=Staphylococcus epidermidis GN=groL PE=3 SV=2) HSP 1 Score: 219.935 bits (559), Expect = 9.758e-57 Identity = 117/227 (51.54%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+D+AI+TGA+ DLGL +++ S++ LGTA KV + KD TT++ ++ I AR+ Q+K ++ ETDS D EKL ER+AKL+GGVAVIKVGAA++TEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V IK + D G +IV KAL AP IA NA +E G+NA T+++ NML+ G++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDLAILTGAQVITDDLGLELKDASLDMLGTANKVEVTKDHTTVVDGNGDENNIDARVGQIKAQIEETDSECDKEKLQERVAKLAGGVAVIKVGAASDTELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNEWVNMLEEGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_NAUPA (60 kDa chaperonin OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=groL PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 9.758e-57 Identity = 116/227 (51.10%), Postives = 162/227 (71.37%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+LQDIAI+TG + + +LG +E+ ++ LG A +V + K++TTI+ K I+ARIAQ+KKE+ ET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAA++ + ++ +EDADE++G DIV++A+ AP IA NA +++ TG+NA T +Y +M +AG+IDP KV R AL Sbjct: 281 GFGDRRKAMLQDIAILTGGQVISEELGRTLESATLADLGQAGRVVVDKENTTIVDGRGDKAAIEARIAQIKKEIEETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAAILKAAKNISV---NVEDADEKIGVDIVKQAVKAPIKQIAKNAGFEPGIVAMKVEEADENTGFNAATGEYVDMFKAGIIDPTKVERIAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACH4 (60 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groL PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 9.758e-57 Identity = 118/227 (51.98%), Postives = 156/227 (68.72%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA LQDIA +TG DLGL +++T ++QLG AR++T+ KDSTTI+ A SK+ I R+ ++K++ ++ S +D +KL ER+AKL+GGVAVI VGAATETEL++R+ RIEDA N+T AA++EG V GGG ALV++ V +K E DE+ G +IV +AL AP IA NA E GYNA TDK+ENM+ AG+IDP KVTR AL Sbjct: 278 GFGDRRKAQLQDIAALTGGTVITEDLGLELKDTKIDQLGQARRITVTKDSTTIVDGAGSKEAIDERVDTIRKQIEDSTSDFDKKKLQERLAKLTGGVAVIHVGAATETELKERRYRIEDALNSTRAAVDEGYVAGGGTALVNVEKAVREVKG--ETTDEQTGINIVLRALSAPVRQIAENAGKDGSVILDKLEHQENEIGYNAATDKWENMVDAGIIDPTKVTRTAL 502
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH601_MESSB (60 kDa chaperonin 1 OS=Mesorhizobium sp. (strain BNC1) GN=groL1 PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 9.758e-57 Identity = 115/228 (50.44%), Postives = 161/228 (70.61%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIA++TG + + DLG+ +EN +++ LG A++V+I K++TTI+ A K EI+ R+AQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIVPGGG AL+ S IK K E+AD+ G +IV++A+ APA IA NA D+ T GYNA T +Y +M+ G++DP KV R AL Sbjct: 280 GFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLGRAKRVSIAKETTTIVDGAGQKSEIEGRVAQIKSQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALLRASSE---IKAKGENADQEAGVNIVRRAIQAPARQIASNAGAEASIVVGKILDNNAVTFGYNAQTGEYGDMIGMGIVDPMKVVRTAL 504
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.664e-56 Identity = 114/228 (50.00%), Postives = 155/228 (67.98%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFGER+ L DIAI+TG ++GL ++ E LG A KV + KD+TTI+ D ++++ + R++Q+K ++ + Y+ EKL+ERIAKLSGGVAVI+VGA TETEL+++KLR+EDA NAT AA+EEGIV GGG L+ L+ V AIKD L + +E++GADIV++AL P LIA NA S+ GYNA T KYE+++ AG+IDP KV RC L Sbjct: 328 GFGERKSQYLDDIAILTGGTVIREEVGLTLDKADKEVLGNAAKVVLTKDTTTIVGDGSTQEAVNKRVSQIKNQIEAAEQEYEKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCL 555
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_OCEIH (60 kDa chaperonin OS=Oceanobacillus iheyensis GN=groL PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.664e-56 Identity = 114/227 (50.22%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA+L+DIA++TGAE DLGL +++ S++QLG A KV + K++TT++ + + I +R+AQ++ + E+ S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T A +EEG+VPGGG ALV++ V + + DE GA IV +AL P I HNA + GYNA TD++ NM++AG++DP KVTR AL Sbjct: 278 GFGDRRKAMLEDIAVLTGAEVITEDLGLDLKSASIDQLGRASKVVVTKENTTVVEGSGDPEAISSRVAQIRAQAEESTSDFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAGVEEGMVPGGGTALVNIHRQV---SELTLEGDEATGASIVLRALEEPVRQIVHNAGLEGSIIVERLKGEKVGIGYNAATDEWVNMVEAGIVDPTKVTRSAL 501
BLAST of CN186176 vs. ExPASy Swiss-Prot
Match: CH60_LACBA (60 kDa chaperonin OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=groL PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.664e-56 Identity = 115/227 (50.66%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 6 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 686 GFG+RRKA LQDIA++TG DLGL +++T+++QLG A+KV + KD TT++ A SKD+I AR+A++K ++ +T S +D +KL ER+AKLSGGVAV++VGAATETEL++RK RIEDA NAT AA+EEG V GGG AL+++ V ++ + DE+ G +IV +AL P IA NA + GYNA +KYE+M+ AG+ DP KVTR AL Sbjct: 278 GFGDRRKAQLQDIAVLTGGTVITDDLGLNLKDTTIDQLGQAQKVNVTKDDTTVVEGAGSKDQIAARVAEIKGQIEDTTSDFDRDKLKERLAKLSGGVAVVRVGAATETELKERKYRIEDALNATRAAVEEGFVAGGGTALINVIGDVAKLE---AEGDEKTGINIVLRALEEPVRQIAQNAGVEGSVVVEHLKGEKPGVGYNAADNKYEDMVAAGITDPTKVTRSAL 501 The following BLAST results are available for this feature:
BLAST of CN186176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186176 ID=CN186176; Name=CN186176; organism=Citrus sinensis; type=EST; length=687bpback to top |