CN186175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH602_PROMA (60 kDa chaperonin 2 OS=Prochlorococcus marinus GN=groL2 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.737e-47 Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ V + +E +GA+IV+ AL AP IA NA K GYNA + +Y +ML AG++DPAKVTR LQNA+S+AGMVLTT+ I Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLASEVHSWAASSLSGEELIGANIVEAALTAPLMRIAENAGANGAVIAEHVKSKPLNDGYNAASGEYVDMLSAGIVDPAKVTRSGLQNASSIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH601_PROMT (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL2A) GN=groL1 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.268e-47 Identity = 100/175 (57.14%), Postives = 123/175 (70.29%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKLSGGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + +E +GA+IV+ AL +P IA NA K GYNA T +Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALGDWSSSNLSGEELIGANIVEAALTSPLMRIAENAGANGAVVAENVKSKPVNDGYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH602_PROM5 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=groL2 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.869e-47 Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + D +E +GA+IV+ +L AP IA NA K + G+NA T +Y +M AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 346 QIKKQMEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADATLSGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 188.348 bits (477), Expect = 3.869e-47 Identity = 106/184 (57.61%), Postives = 132/184 (71.74%), Query Frame = -1 Query: 191 KLEIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD----KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 730 K Q+++++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG L HL+ P ++D L+D +E GA IV +AL AP IA NA K+ E+ GYNA + +Y +ML AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 341 KSRCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLA---PQLEDWATGNLKD-EELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKEFNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.053e-47 Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + DK +E +GA+IV+ +L +P IA NA K + G+NA T Y +M AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 346 QIKKQMDETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH602_SYNS3 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9311) GN=groL2 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.619e-47 Identity = 98/175 (56.00%), Postives = 122/175 (69.71%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L H++ + +E +GA+IV AL AP IA NA K + GYNA +Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHMAPALEEWAASNLSGEELIGANIVASALTAPLMRIAENAGVNGAVVAENVKSKSFNEGYNAANGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH601_SYNPX (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH8102) GN=groL1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.619e-47 Identity = 100/175 (57.14%), Postives = 123/175 (70.29%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + + +E +GA+IV AL AP IA NA K + GYNA T Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPSLEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRAISEGYNAATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.619e-47 Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + + +E +GA+IV+ +L AP IA NA K + GYNA T Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLAADLQKWANSNLSGEELIGANIVEASLAAPLMRIAENAGANGAVVAENVKSRPISDGYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.126e-46 Identity = 98/175 (56.00%), Postives = 124/175 (70.86%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + + +E +G++IV+ +L AP IA NA K + GYNA T Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLASDLQKWANSNLSGEELIGSNIVEASLAAPLMRIAENAGANGAVVAENVKSRPISDGYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.470e-46 Identity = 97/180 (53.89%), Postives = 129/180 (71.67%), Query Frame = -1 Query: 191 KLEIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 730 K Q++K++ ET+S YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + ++ +E +GA+IV +AL AP IA NA + ++ G+NA +++Y +ML AG+IDPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 341 KARCEQIRKQMDETESTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALTEWANQNLSGEELIGANIVAQALDAPLKRIAENAGANGSVVAENVRHKPFSEGFNAASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECI 520 The following BLAST results are available for this feature:
BLAST of CN186175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186175 ID=CN186175; Name=CN186175; organism=Citrus sinensis; type=EST; length=769bpback to top |