CN186175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.529e-46 Identity = 99/180 (55.00%), Postives = 131/180 (72.78%), Query Frame = -1 Query: 197 KLEIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 730 K + Q+K+++ ET S +D EKL ER+AKLSGGVAVI+VGAATETEL++RKLRIEDA NAT A +EEG+V GGGA+LVH+ +PA++ LE + DER G I+++AL P IA NA SE G++A+T+KY NM++AG++DP KVTR ALQNAASV+ M+LTT+ Sbjct: 341 KDRVNQIKRQIEETTSDFDKEKLQERLAKLSGGVAVIQVGAATETELKERKLRIEDALNATRAGVEEGMVAGGGASLVHV---IPAVEALLETTEGDERTGVKIIRRALEEPLRQIAANAGLEGSVIVEKVMSSEKGIGFDALTEKYVNMIEAGIVDPTKVTRSALQNAASVSAMLLTTE 517
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH602_SYNSC (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9605) GN=groL2 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.529e-46 Identity = 98/175 (56.00%), Postives = 122/175 (69.71%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + +E +GA+IV AL AP IA NA K G+NA + +Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEQWAASSLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKARAGAEGFNAASGEYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH60_EMIHU (60 kDa chaperonin, chloroplastic OS=Emiliania huxleyi GN=groL PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.245e-45 Identity = 97/175 (55.43%), Postives = 126/175 (72.00%), Query Frame = -1 Query: 191 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 715 QL++++ +DS Y+ EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG L+H++ + + DE LG IV+KAL AP IA NA K+S++ GYNA T++ +M +AG+IDPAKVTR LQNAAS+A M+LTT+ I Sbjct: 348 QLRRQMETSDSTYEKEKLQERLAKLTGGVAVIKVGAATETEMKDRKLRLEDAVNATKAAVEEGIVPGGGTTLIHIAAELLEWVKETLTGDELLGGLIVEKALQAPLKKIALNAGENGSIIVERIKESDFEIGYNAATNEIVDMYEAGIIDPAKVTRSTLQNAASIASMILTTECI 522
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.123e-45 Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = -1 Query: 194 RMKYKLEIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 742 + + + I+Q+K ++AET S +D EKL ER+AKL+GGVAVI+VGAATETE++++KLR+EDA AT AA+EEGI+ GGG+A +H S V + KLE DER GA I+ KAL AP S IA NA ++ + G+NA+T+KY +M++ G++DP+KVTR ALQNA SVA LTT+A Sbjct: 337 KAEIEARISQIKAQIAETTSEFDKEKLQERLAKLAGGVAVIRVGAATETEMKEKKLRMEDALAATRAAVEEGIIAGGGSAYIHASKEVAKLAAKLE-GDERTGAQIILKALEAPLSCIAQNAGLEGAVIVNKVREKKTGVGFNALTEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEA 518
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.773e-45 Identity = 97/177 (54.80%), Postives = 130/177 (73.45%), Query Frame = -1 Query: 191 IAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 721 IAQ+KK++ ETDS YD EKL ER+AKL+GGVAVI+VGAATETEL+++K R+EDA AT AA+EEGIVPGGGA LVH +PA++ + DE +G IV++AL P IA NA + + G++A+ ++Y +M++AG++DPAKVTR ALQNAAS+A M+LTT+AI Sbjct: 345 IAQIKKQIEETDSDYDREKLQERLAKLAGGVAVIRVGAATETELKEKKHRVEDALAATRAAVEEGIVPGGGATLVHA---IPAVEKIQAEGDEAVGVRIVRRALEEPLRQIAANAGLEGSVIVERVRSEQPGIGFDAVKEEYVDMIKAGIVDPAKVTRSALQNAASIASMLLTTEAI 518
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH60_ALKMQ (60 kDa chaperonin OS=Alkaliphilus metalliredigens (strain QYMF) GN=groL PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.177e-45 Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = -1 Query: 194 KLEIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 730 K ++Q+KK++ ET S +D EKL ER+AKLSGGVAVI+VGAATETEL++RKLRIEDA NAT AA+EEGIV GGG ALV++ +PA++ LE DE+ G I+++AL P IA NA S+ GY+ + +KY NM++AG++DP KVTR ALQNAAS++ M+LTT++ Sbjct: 341 KDRVSQIKKQIEETTSDFDKEKLQERLAKLSGGVAVIQVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTALVNV---IPAVEALLEGSQGDEKTGIQIIRRALEEPLRQIAENAGLEGSVIVNKVMSSDKGIGYDVLNNKYVNMIEAGIVDPTKVTRSALQNAASISAMLLTTES 518
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH603_ANAVT (60 kDa chaperonin 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL3 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.177e-45 Identity = 95/181 (52.49%), Postives = 129/181 (71.27%), Query Frame = -1 Query: 191 KLEIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPA-IKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 730 K I Q+++++ E +S YD EKL +R+AKL+GGVAVIKVGAATETEL+DRKLR+EDA NAT AA+EEGIVPGGG + H++ + K +++D +E G IV +AL AP IA NA ++ + GY+A+ +K+ NM +AG++DPAKVTR ALQNAAS+ GMVLTT+ + Sbjct: 341 KARIEQIRRQIQEVESSYDKEKLQQRLAKLAGGVAVIKVGAATETELKDRKLRLEDAINATKAAVEEGIVPGGGTTIAHIAPQLEEWAKSQMKD-EELTGTMIVARALYAPLRRIADNAGANGAVIVERVRELPFDEGYDAVANKFVNMFEAGIVDPAKVTRSALQNAASIGGMVLTTEGV 520
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH60_MACCJ (60 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groL PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.067e-45 Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = -1 Query: 191 IAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 721 + QLK ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV + + V A++ D G IV KAL AP IA NA K +E GYNA TD++ NM+ AG++DP KVTR ALQNAASVA M LTT+A+ Sbjct: 344 VGQLKAQIEETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAAVE---ATGDVATGVKIVLKALEAPIRQIAENAGLEGSVIVEKIKHAETGVGYNAATDEWVNMIDAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH60_EUBE2 (60 kDa chaperonin OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=groL PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.054e-44 Identity = 95/177 (53.67%), Postives = 128/177 (72.32%), Query Frame = -1 Query: 191 IAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 721 +AQ+K +L ET S +D EKL ER+AKL+GGVAVI+VGAATETE+++ KLR+EDA NAT AA+EEG+V GGG+A +H S V + L DE++GA I+ KAL AP IA+NA ++SE TG++A ++Y NM+ AG++DPAKVTR ALQNA SVA +LTT+++ Sbjct: 344 VAQIKAQLEETTSEFDKEKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGVVSGGGSAYIHASKKVAELVKTL-SGDEKIGAQIILKALEAPLFHIAYNAGLEGAVIINKVRESEVGTGFDAYKEEYVNMIDAGILDPAKVTRSALQNATSVASTLLTTESV 519
BLAST of CN186175 vs. ExPASy Swiss-Prot
Match: CH60_STAAB (60 kDa chaperonin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=groL PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.376e-44 Identity = 99/177 (55.93%), Postives = 128/177 (72.32%), Query Frame = -1 Query: 191 IAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 721 ++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V I+ + D G +IV KAL AP IA NA K++E G+NA TD++ NML+AG++DP KVTR ALQ+AASVA M LTT+A+ Sbjct: 344 VSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATDEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAV 517 The following BLAST results are available for this feature:
BLAST of CN186175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186175 ID=CN186175; Name=CN186175; organism=Citrus sinensis; type=EST; length=769bpback to top |