CN186160

Overview
NameCN186160
Unique NameCN186160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13718 contig Csv1_Contig13718:171..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 7.149e-61
Identity = 113/201 (56.22%), Postives = 150/201 (74.63%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            H+NE ++L SR+V QG+G+LQPH L+ E + +    + R+ L+DG F +V+K+AQEAIV+PP+VA+A+RPRPGVWEYVRVNV EL+VE+L+V EYL FKEELVD +    F LELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FL+ H Y G  +MLND             +A++++  LP D
Sbjct:   23 HKNELLALFSRFVKQGQGMLQPHQLLTEYEAVIPAAD-REKLKDGVFEDVLKAAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELAVEELTVPEYLQFKEELVDGSGQSNFTLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLKEHHYNGTSMMLNDRIQTLGALQASLRRADEYVLSLPLD 222          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 7.149e-61
Identity = 117/201 (58.21%), Postives = 147/201 (73.13%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            H NE V++ +R V  GKG+LQ H +I E +N   + + R+ L+DG F +V++SAQE IV+ P+VA+A+RPRPGVWEYVRVNV EL+VE L+V EYL FKE+LV+   N  FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLRAH YKG  +MLND             KAE+HLS L  D
Sbjct:   27 HPNELVAVFTRLVNLGKGMLQAHQIIAEYNNAISEAD-REKLKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEYVRVNVSELAVELLTVPEYLQFKEQLVEEGTNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSGLSAD 226          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 9.337e-61
Identity = 119/201 (59.20%), Postives = 145/201 (72.14%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            HRNE +  LSR  + GKGIL+PH L+ E D I  DD+ + N  +  F E++KS QEAIVLPP+VA+A+R RPGVWEYVRVNV  L VE+LSV EYL FKEELVD A N  FVLELDFEPF A+FP+P  + SIGNGV+FLNRHLS+ MF +K+ + PLL+FLRAH YKG  +MLND             KAE++L  LPP+
Sbjct:   23 HRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKDKLN--EHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALVVEELSVPEYLQFKEELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMAPLLEFLRAHHYKGKTMMLNDRIHNSNTLQNVLRKAEEYLIMLPPE 221          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS3_ORYSJ (Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 9.337e-61
Identity = 114/201 (56.72%), Postives = 146/201 (72.64%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            H NE V++ SR V QGKG+LQPH +I E +    + E R+ L+D    +V++ AQEAIV+PP++A+A+RPRPGVWEY+R+NV +L VE+LSV EYL FKE+LVD +    FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLRAH YKG  +MLND             KAE HL+ +  D
Sbjct:   27 HTNELVAVFSRLVNQGKGMLQPHQIIAEYNAAIPEGE-REKLKDSALEDVLRGAQEAIVIPPWIALAIRPRPGVWEYLRINVSQLGVEELSVPEYLQFKEQLVDGSTQNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLDALQGALRKAEKHLAGITAD 226          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 9.337e-61
Identity = 118/201 (58.71%), Postives = 145/201 (72.14%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            HRNE +  LSR  + GKGIL+PH L+ E D I  DD+ + N  +  F E++KS QEAIVLPP+VA+A+R RPGVWEY+RVNV  L VE+LSV EYL FKEELVD A N  FVLELDFEPF A+FP+P  + SIGNGV+FLNRHLS+ MF +K+ + PLL+FLRAH YKG  +MLND             KAE++L  LPP+
Sbjct:   23 HRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKNKLN--EHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYIRVNVNALVVEELSVPEYLQFKEELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLEFLRAHHYKGKTMMLNDRIQNSNTLQNVLRKAEEYLIMLPPE 221          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.593e-60
Identity = 116/201 (57.71%), Postives = 146/201 (72.64%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            H NE V++ SR V QGKG+LQPH +  E +    + E R+ L++ PF ++++ AQEAIV+PP+VA+A+RPRPGVWEYVRVNV EL VE+LSV  YL FKE+L + + +  FVLELDF PFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLRAH YKG  +MLND             KAE HLS LP D
Sbjct:   27 HTNELVAVFSRLVNQGKGMLQPHQITAEYNAAIPEAE-REKLKNTPFEDLLRGAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELGVEELSVLRYLQFKEQLANGSTDNNFVLELDFGPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLGTLQGALRKAETHLSGLPAD 226          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.593e-60
Identity = 123/191 (64.40%), Postives = 141/191 (73.82%), Query Frame = 1
Query:   46 LSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLP 618
            L RYVAQGKGILQ H LIDE       D   ++L   PF +V+   QEAIVLPPFVA+A+RPRPGV EYVRVNVYELSV+ L+VSEYL FKEELV+   N  ++LELDFEPFNAT PRP RSSSIGNGVQFLNRHLSS MFRNK+ +EPLL+FLR HK+ G  +MLND             +AE+ LSKLP
Sbjct:   29 LVRYVAQGKGILQSHQLIDEFLKTVKVDGTLEDLNKSPFMKVL---QEAIVLPPFVALAIRPRPGVREYVRVNVYELSVDHLTVSEYLRFKEELVNGHANGDYLLELDFEPFNATLPRPTRSSSIGNGVQFLNRHLSSIMFRNKESMEPLLEFLRTHKHDGRPMMLNDRIQNIPILQGALARAEEFLSKLP 216          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.548e-60
Identity = 113/201 (56.22%), Postives = 149/201 (74.13%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            H NE ++L SRYV QGKG+LQ H L+ E D +F  D+ +      PF +++++AQEAIVLPP+VA+A+RPR GVW+Y+RVNV EL+VE+L+VSEYL FKE+LVD   + +FVLELDFEPFNA+FPRP+ S S G GVQFLNRHLSS +F++K+ L PLL+FL+AH YKG  ++LND             KAE++L  +P D
Sbjct:   22 HPNELIALFSRYVHQGKGMLQRHQLLAEFDALFESDKEKY----APFEDILRAAQEAIVLPPWVALAIRPRTGVWDYIRVNVSELAVEELTVSEYLAFKEQLVDEHASRKFVLELDFEPFNASFPRPSMSKSYGKGVQFLNRHLSSKLFQDKESLYPLLNFLKAHNYKGTTMILNDRIQSLRGLQSALRKAEEYLVSIPED 218          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 8.740e-59
Identity = 113/201 (56.22%), Postives = 145/201 (72.14%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            HRNE +  LSR  + GKGIL+PH L+ E ++I  +D+ + N  D  F EV+KS QEAIVLPP+VA+A+R RPGVWEYVRVNV  L VE+L+V E+L FKEELV+   N+ FVLELDFEPF A+FP+P  + SIGNGV+FLNRHLS+ MF +K+ + PLL+FLR H YKG  +MLND             KAE++L+ L P+
Sbjct:   23 HRNEILLFLSRIESHGKGILKPHQLLAEFESIHKEDKDKLN--DHAFEEVLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALIVEELTVPEFLQFKEELVNGTSNDNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLEFLRVHHYKGKTMMLNDRIQNLYTLQKVLRKAEEYLTTLSPE 221          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.153e-57
Identity = 114/201 (56.72%), Postives = 140/201 (69.65%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            HRNE +  LSR  + GKGIL+PH L+ E + I  +D+ + +   G F+EVIKS QEAIV PP+VA+A+R RPGVWEYVRVNV+ L VE+LSV +YL FKEELV  + +  FVLELDF PF A+FPRP  + SIGNGV+FLNRHLS+ MF  KD + PLL+FLR H Y G  LMLN+             KA D+LS LP D
Sbjct:   23 HRNEILMFLSRIESHGKGILKPHQLLAEYEAISKEDKLKLDDGHGAFAEVIKSTQEAIVSPPWVALAIRLRPGVWEYVRVNVHHLVVEELSVPQYLQFKEELVIGSSDANFVLELDFAPFTASFPRPTLTKSIGNGVEFLNRHLSAKMFHGKDSMHPLLEFLRLHNYNGKTLMLNNRVQNVNGLQSMLRKAGDYLSTLPSD 223          
The following BLAST results are available for this feature:
BLAST of CN186160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUS2_TULGE7.149e-6156.22Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS1_ORYSJ7.149e-6158.21Sucrose synthase 1 OS=Oryza sativa subsp. japonica... [more]
SUSY_SOLLC9.337e-6159.20Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS3_ORYSJ9.337e-6156.72Sucrose synthase 3 OS=Oryza sativa subsp. japonica... [more]
SUS1_SOLTU9.337e-6158.71Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUS2_HORVU1.593e-6057.71Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ... [more]
SUS2_ARATH1.593e-6064.40Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUS1_HORVU3.548e-6056.22Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]
SUS2_SOLTU8.740e-5956.22Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]
SUS1_DAUCA2.153e-5756.72Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002H10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186160 ID=CN186160; Name=CN186160; organism=Citrus sinensis; type=EST; length=625bp
TGGAGGAAACTCCACTTAGGGCATCGTAATGAANTCGTTTCTCTCCTCTC
CAGGTATGTGGCTCAAGGCAAAGGGATTTTGCAACCGCATGTACTGATCG
ACGAGCTTGATAACATTTTTGGCGACGATGAAGGTCGGCAGAACCTTCGG
GATGGTCCGTTTAGCGAAGTTATCAAATCTGCTCAGGAAGCGATAGTTCT
GCCTCCGTTTGTGGCTATAGCAGTCCGTCCAAGACCAGGTGTTTGGGAAT
ATGTCCGTGTTAATGTCTATGAACTTAGCGTGGAGCAACTAAGTGTTTCT
GAATACCTTCACTTCAAAGAAGAACTTGTAGATGCGGCGTTTAATGAAAG
ATTTGTGCTTGAGCTTGATTTTGAACCATTCAATGCAACTTTTCCTCGCC
CGAATCGGTCTTCATCAATTGGTAATGGGGTTCAGTTCCTCAACCGTCAC
CTTTCTTCAAGTATGTTCCGCAACAAAGACTGTTTGGAGCCCTTACTTGA
TTTCCTTCGAGCACACAAATATAAAGGGCATCTATTGATGTTGAATGATC
GGATTCAAAGCATTTCCCGGCTTCAGTCATCTCTGTCCAAGGCAGAGGAC
CATCTTTCCAAGCTTCCACCTGATA
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