CN186145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186145 vs. ExPASy Swiss-Prot
Match: CAN11_RAT (Calpain 11 OS=Rattus norvegicus GN=Capn11 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.126e-11 Identity = 46/159 (28.93%), Postives = 87/159 (54.72%), Query Frame = -3 Query: 216 DPNIVACFQ-LADRDNS-GLIDDKELQGALSSYNQSF-----SLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDTNELREALMSLGLAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGS 671 D N V F+ LA+RD+ + D ++L +SS +SF SL R ++ ++ K+G EF ++ ++ W +F++ D+DRSG +++ E+R A+ G+ ++ V +++V ++ + +++DNFI C L +K + F DT +GS Sbjct: 546 DQNSVELFETLANRDSQVDMYDLQKLLNKMSSKVKSFKSKGFSLDVCRRMVNLMDKDDSGKLGLHEFHILWKKIKKWMEIFKECDQDRSGNLNSYEMRLAIEKAGIRMNNRVTEVVVARY---ADANMIVDFDNFINCFLRLKAMFAFFLSMDTKKTGS 701
BLAST of CN186145 vs. ExPASy Swiss-Prot
Match: CAN1_RABIT (Calpain-1 catalytic subunit (Fragment) OS=Oryctolagus cuniculus GN=CAPN1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11 Identity = 47/164 (28.66%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 207 DPNIVACF-QLADRDNSGLIDDKELQGALSSYN--------QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDTNELREALMSLGLAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 671 D N A F QLA D I +ELQ L+ + FS+ + R ++ K+G EF +++ ++N+ A+F K D D+SG + E+R A+ S G ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 132 DENFKALFRQLAGEDLE--ISVRELQTILNRITSKHKDLRTKGFSMESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLAIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 290
BLAST of CN186145 vs. ExPASy Swiss-Prot
Match: CAN1_MACFA (Calpain-1 catalytic subunit OS=Macaca fascicularis GN=CAPN1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 47/164 (28.66%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 207 DPNIVACF-QLADRDNSGLIDDKELQGALSSY--------NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDTNELREALMSLGLAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 671 D N A F QLA D I KEL+ L+ + FSL + R ++ K+G EF +++ ++N+ ++F K D D+SG + E+R A+ S G ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 544 DENFKALFRQLAGEDME--ISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 702
BLAST of CN186145 vs. ExPASy Swiss-Prot
Match: CAN1_HUMAN (Calpain-1 catalytic subunit OS=Homo sapiens GN=CAPN1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 47/164 (28.66%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 207 DPNIVACF-QLADRDNSGLIDDKELQGALSSY--------NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDTNELREALMSLGLAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 671 D N A F QLA D I KEL+ L+ + FSL + R ++ K+G EF +++ ++N+ ++F K D D+SG + E+R A+ S G ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 544 DENFKALFRQLAGEDME--ISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 702
BLAST of CN186145 vs. ExPASy Swiss-Prot
Match: CAN2_CHICK (Calpain-2 catalytic subunit OS=Gallus gallus GN=CAPN2 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11 Identity = 41/163 (25.15%), Postives = 88/163 (53.99%), Query Frame = -3 Query: 189 GTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDTNELREALMSLGLAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 677 G+D I A F+L N L ++++ + FS+ T ++++ N + K+G KEF ++ +Q ++ ++ ++D DRSG +++ E+R AL + G +S + ++V +F + I++DN + C + ++ L + F++ DT +G+ N++ Sbjct: 543 GSDAEISA-FELRSILNKILAKRQDIK------SDGFSIETCKIMVDLLDNDGSGKLGLKEFHTLWTKIQKYQKIYREIDVDRSGTMNSYEMRRALEAAGFKLSCQLHQIIVARF---ADEDLIIDFDNCVRCLIRLETLYKMFRKLDTEKTGTIELNLINWL 695
BLAST of CN186145 vs. ExPASy Swiss-Prot
Match: CAN1_PONAB (Calpain-1 catalytic subunit OS=Pongo abelii GN=CAPN1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11 Identity = 46/164 (28.05%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 207 DPNIVACF-QLADRDNSGLIDDKELQGALSSY--------NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDTNELREALMSLGLAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 671 D N A F QLA D + KEL+ L+ + FSL + R ++ K+G EF +++ ++N+ ++F K D D+SG + E+R A+ S G ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 544 DENFKALFRQLAGEDMETSV--KELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 702
BLAST of CN186145 vs. ExPASy Swiss-Prot
Match: CAN1_PIG (Calpain-1 catalytic subunit OS=Sus scrofa GN=CAPN1 PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11 Identity = 46/164 (28.05%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 207 DPNIVACF-QLADRDNSGLIDDKELQGALSSY--------NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDTNELREALMSLGLAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 671 D N A F QLA D I +EL+ L+ + FSL + R ++ K+G EF +++ ++N+ ++F K D D+SG + E+R A+ S G ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 544 DENFKALFRQLAGEDME--ISVRELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLFELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 702 The following BLAST results are available for this feature:
BLAST of CN186145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186145 ID=CN186145; Name=CN186145; organism=Citrus sinensis; type=EST; length=754bpback to top |