CN186141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: GABT_ECOLI (4-aminobutyrate aminotransferase OS=Escherichia coli (strain K12) GN=gabT PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.761e-26 Identity = 57/180 (31.67%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 172 PETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADNKSPNEP 708 PE IAA + EPV G GG + ++++A+ ++ I+ IADEV GR GT+F ++ + PDL +FAK+++ + P+ + EV + + G TY+G+P++C A+E LK++++ N++++ N + K +DG+ A ++ P IG++RG G ++ E ++ N+P Sbjct: 197 PEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMDAV-------APGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKP 368
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SHISS (Putrescine aminotransferase OS=Shigella sonnei (strain Ss046) GN=patA PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.606e-26 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 693 K+ + +AA I EP+ G GGVI PP Y V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q ++ DG + + ++ E RG G+++ EF DN+ Sbjct: 226 KKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQADQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SHIFL (Putrescine aminotransferase OS=Shigella flexneri GN=patA PE=3 SV=5) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 61/179 (34.08%), Postives = 96/179 (53.63%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 693 K+ + +AA I EP+ G GGVI PP Y V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 226 KKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SHIF8 (Putrescine aminotransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=patA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 61/179 (34.08%), Postives = 96/179 (53.63%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 693 K+ + +AA I EP+ G GGVI PP Y V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 226 KKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SALTY (Putrescine aminotransferase OS=Salmonella typhimurium GN=patA PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 61/180 (33.89%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 696 K+ + IAA I EP+ G GGVI PP Y +V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 226 KKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SALSV (Putrescine aminotransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=patA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 61/180 (33.89%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 696 K+ + IAA I EP+ G GGVI PP Y +V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 226 KKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SALPC (Putrescine aminotransferase OS=Salmonella paratyphi C (strain RKS4594) GN=patA PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 61/180 (33.89%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 696 K+ + IAA I EP+ G GGVI PP Y +V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 226 KKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SALPB (Putrescine aminotransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=patA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 61/180 (33.89%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 696 K+ + IAA I EP+ G GGVI PP Y +V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 226 KKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SALNS (Putrescine aminotransferase OS=Salmonella newport (strain SL254) GN=patA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 61/180 (33.89%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 696 K+ + IAA I EP+ G GGVI PP Y +V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 226 KKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CN186141 vs. ExPASy Swiss-Prot
Match: PAT_SALG2 (Putrescine aminotransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=patA PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 61/180 (33.89%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 163 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 696 K+ + IAA I EP+ G GGVI PP Y +V+ + ++ L I DEV GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 226 KKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLIAIEFVDNET 400 The following BLAST results are available for this feature:
BLAST of CN186141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186141 ID=CN186141; Name=CN186141; organism=Citrus sinensis; type=EST; length=751bpback to top |