CV998106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBP4B_XENLA (Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-B PE=1 SV=3) HSP 1 Score: 347.051 bits (889), Expect = 9.051e-95 Identity = 162/246 (65.85%), Postives = 196/246 (79.67%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S +V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G+LLS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+IWD R+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS 259
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP7_RAT (Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.707e-93 Identity = 159/246 (64.63%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHLLS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+IWD R+ Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 258
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP7_MOUSE (Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.707e-93 Identity = 159/246 (64.63%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHLLS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+IWD R+ Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 258
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP7_MACFA (Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.707e-93 Identity = 159/246 (64.63%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHLLS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+IWD R+ Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 258
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP7_HUMAN (Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.707e-93 Identity = 159/246 (64.63%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHLLS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+IWD R+ Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 258
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: CAF1_DROME (Probable histone-binding protein Caf1 OS=Drosophila melanogaster GN=Caf1 PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.707e-93 Identity = 162/245 (66.12%), Postives = 194/245 (79.18%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 941 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD + GKDYSV ++ILGTHTS+ E N+L++A VQLP +D++ D HYD+++ +FGGFG GK++I +INH+GEVNRARYMPQN +IATKT S++V VFDY+KHPSKP G C PDLRLRGH EGYGLSW+ G+LLS SDD ICLWDINA PK ++ ++A IF H VVEDVAWHL HE LFGSV DDQ L+IWD R Sbjct: 19 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD-EQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP7_BOVIN (Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 4.966e-93 Identity = 158/246 (64.23%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHLLS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+IWD R+ Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 258
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP4_DANRE (Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3) HSP 1 Score: 341.273 bits (874), Expect = 4.966e-93 Identity = 160/246 (65.04%), Postives = 194/246 (78.86%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+SV +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT +++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ LLS SDD ICLWDI+ PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+IWD R+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLRSCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS 259
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBP4A_XENLA (Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-A PE=1 SV=3) HSP 1 Score: 340.502 bits (872), Expect = 8.471e-93 Identity = 159/246 (64.63%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WL D P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +I HDGEVNRARYMPQNP +IATKT +++V VFDY+KHPSKP G C+P+LRLRGH EGYGLSW+ G+LLS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+IWD R+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS 259
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP7_DANRE (Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 8.471e-93 Identity = 161/247 (65.18%), Postives = 196/247 (79.35%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDR-SDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY V +++LGTHTS+ E N+L++A Q+P DD++ DA HYD ++ ++FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT +++V FDY+KHPSKP G CSPDLRLRGH EGYGLSW+ G+LLS SDD ICLWDI+ APK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+IWD R+ Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSD-EQNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS 259 The following BLAST results are available for this feature:
BLAST of CV998106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV998106 ID=CV998106; Name=CV998106; organism=Citrus sinensis; type=EST; length=954bpback to top |