CV998106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP7_CHICK (Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 1.106e-92 Identity = 160/246 (65.04%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+ E N+L++A+VQ+P DD + D YD ++ +FGGFG GK++ +INH+GEVNRARYMPQNP++IATKT SA+V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ +GHLLS SDD +CLWDI+A PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+IWD R+ Sbjct: 14 RVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD-EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 257
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBP7_PONAB (Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 1.445e-92 Identity = 157/246 (63.82%), Postives = 194/246 (78.86%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S+ V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHLLS SDD +CLWDINA PK K ++A +F H VVEDVAWHL HE LFGSV DDQ L++WD R+ Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRS 258
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 2.307e-90 Identity = 152/246 (61.79%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS-LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 ++INEEYKIWK++TPFLYD+VITHALEWPSLTV WLP + P K YS++K+ILGTHTS+ E NYLM+A+V LP+D++ ++ YDD + + GG G + K++IIQ+INH+GEVNRAR MPQN +IATKTVS+EVY+FD +KHP +P DG CSP+L+L GH EGYG+SW+ KEGHLLS SDD IC+WDI+AA K+ S L+A+ I+ H +VEDVAWH H+ FGSVGDD+ L+IWD RT Sbjct: 11 KVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEKVILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRT 256
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: LIN53_CAEBR (Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae GN=lin-53 PE=3 SV=2) HSP 1 Score: 312.383 bits (799), Expect = 2.470e-84 Identity = 149/246 (60.57%), Postives = 195/246 (79.27%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA-APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLP+ E+ D++V ++ILGTHTS+ E N+L+++++ +P D+++ DA YD +R +FGGFG NGKV+ +INH+GEVNRARYMPQ P +IATK+ SA+VY+FDY+K+PS P D +P L+L+GH+ EGYGLSW+ KEG +LS SDD +C WDIN A N L+A +IFK HE VVEDVAWH+ H+ +FGSVGDD+ LLIWDLRT Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKE-SSDHTVHRLILGTHTSD-EQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPK-DNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRT 254
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.944e-82 Identity = 138/257 (53.70%), Postives = 180/257 (70.04%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLD---------DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 950 +L NEEYKIWKKN+PFLYDLV+THALEWPSLT +WLPD+E P G+ Y+ +++LGTHTS + NYL AQVQLP +S D + YD+D+ + G + ++ I+Q+INHDGE+NRARY PQN LIAT++V+ + Y+FD +KH + P DG C PD+ L G EGYGLSWS K+GH+L+ S+D +C WDIN K N +L+ + H +VEDVAWH HE LFGSVGDD+ LLIWD+R P+ Sbjct: 69 KLSNEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWLPDKESPAGQSYTQHRLLLGTHTSGQDQNYLQFAQVQLPTTGADGASNSAESRLDLKQYDEDKGEIGSYSATTARLSIVQKINHDGEINRARYCPQNCDLIATRSVTGKTYIFDRTKHSNTPSADGVCRPDIILEGQHKEGYGLSWSPLKQGHILAASEDTTVCHWDINNYTKPNNTLQPSATYTGHTAIVEDVAWHNHHESLFGSVGDDRQLLIWDIREPA 325
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: LIN53_CAEEL (Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 7.438e-81 Identity = 144/246 (58.54%), Postives = 189/246 (76.83%), Query Frame = 3 Query: 210 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLPD + D+++ ++ILGTHTS+ E N+L+++++ +P DD++ DA YD +RS++GGFG NGKV+ +INH+GEVNRARYMPQ +IATK+ A+VY+FDY KH S P D +P +RL+GH+ EGYGLSW+ KEG +LS SDD +C WDINA L+A +FK HE VVEDVAWH+ H+ +FGSVGDD+ LLIWD+RT Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTIHRLILGTHTSD-EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRT 254
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: HAT2_CRYNE (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans GN=HAT2 PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 5.163e-74 Identity = 131/248 (52.82%), Postives = 175/248 (70.56%), Query Frame = 3 Query: 216 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND----ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 INE+YK+WKKNTPFLYD VITHAL WPSLT +WLPD + P DY+ Q++I+GTHTS ++L++A+V LP + A YD+++ + G + + +++ IQ INH GEVNRARYMPQNP LIATKTV+ EVYVFD +KH SK P +G C PD+RL+G + EGYGLSW+ KEGH+LS S+D I WDI K + SL+ ++++ H V DV WH ++E +FGSV DD ++IWD R+ Sbjct: 25 INEQYKVWKKNTPFLYDTVITHALTWPSLTCQWLPDITDVPDTDYTSQRLIIGTHTSGQANDHLIIAEVLLPKKGAGISDKALADLYDEEKQEIGSYTASPARIRAIQTINHAGEVNRARYMPQNPELIATKTVTGEVYVFDRTKHESKAPANGECKPDIRLKGQTKEGYGLSWNALKEGHILSASEDTTIGHWDIQGYSKQDPSLQPLRLYTGHSAYVADVEWHPKNENMFGSVSDDGQIMIWDTRS 272
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: MSI3_ARATH (WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana GN=MSI3 PE=1 SV=2) HSP 1 Score: 261.536 bits (667), Expect = 5.001e-69 Identity = 126/245 (51.43%), Postives = 167/245 (68.16%), Query Frame = 3 Query: 216 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 + EE+ IWK+NTPFLYDL+I+H LEWPSLT+ W+P P KD ++V K+ILGTHTS ++LM+A V +P D+E D + KV+I Q+I DGEVNRAR MPQ P L+ KT +EV++FDY++ KP C PDLRL GH EGYGL+WS FKEG+LLSGS D +ICLWD++A +K L M +++ H+ ++EDVAWH+++E +FGS GDD L+IWDLRT Sbjct: 15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRT 250
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: MSI2_ARATH (WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana GN=MSI2 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.482e-68 Identity = 129/250 (51.60%), Postives = 167/250 (66.80%), Query Frame = 3 Query: 216 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG-----KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 944 + E++ +WKKNTPFLYDL+I+H LEWPSLTV W+P P D + V K+ILGTHTS + ++LM+A V P ++E G G AN KV+I Q+I DGEVNRAR MPQ P L+ KT EV++FDY+KH +K C PDLRL GH EGYGLSWS FKEG+LLSGS D +ICLWD++A P++K L AM +++ HE + DV+WH+++E LFGS G+D L+IWD RT Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAEP-------------GIGGANQDPFIPKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRT 249
BLAST of CV998106 vs. ExPASy Swiss-Prot
Match: RBA1_CAEEL (Probable histone-binding protein rba-1 OS=Caenorhabditis elegans GN=rba-1 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 9.760e-65 Identity = 119/246 (48.37%), Postives = 165/246 (67.07%), Query Frame = 3 Query: 219 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI----FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 941 ++E++IWKKN P+LYD V+T +EWPSL+V+W+PD + D S+ +MI GTHT N+LM+++ + D E D +D +R +FGG+G + K +INH GEV+RARYMP NPF+IA++ S +VY+FDY+KHPS+P D P LRL+GH EGYG+SWS +EGHLL+ DD IC WDINA N+++ + FK H EDV++H H ++FGSVGDD+ L +WDLR Sbjct: 11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPK-DTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINA---NQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLR 252 The following BLAST results are available for this feature:
BLAST of CV998106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CV998106 ID=CV998106; Name=CV998106; organism=Citrus sinensis; type=EST; length=954bpback to top |