CV998101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998101 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.467e-23 Identity = 64/138 (46.38%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 92 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWS-GRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSG-KCSYAGC 499 F+ A T + N C VWP AG P+ GGF+L ++ I +P S GR WGR GC F+ +GRG CATGDC G+L C G PATLAE T+G QDFYD+S++DGYN+AM G KC A C Sbjct: 15 FAAGASAATFRITNNCGFTVWP-----AGIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG--QPATLAEYTIGGSQDFYDISVIDGYNLAMDFSCSTGVALKCRDANC 142
BLAST of CV998101 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.881e-22 Identity = 63/138 (45.65%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 92 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWS-GRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSG-KCSYAGC 499 F+ A T + N C VWP AG P+ GGF+L ++ I +P S GR WGR GC F+ +GRG CATGDC G+L C G PATLAE T+G QDFYD+S++DG+N+AM G KC A C Sbjct: 15 FAAGASAATFRITNNCGFTVWP-----AGIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG--QPATLAEYTIGGSQDFYDISVIDGFNLAMDFSCSTGVALKCRDANC 142
BLAST of CV998101 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.052e-21 Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 92 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCP 526 F+ A T + N C +WP AG P+ GGF+L + +I +P +GR W R GC F+ G G C TGDCGG L C+ + G PPATLAE T+G QDFYD+S++DG+N+AM CS + + CP Sbjct: 14 FAAGASAATFNIKNNCGSTIWP-----AGIPV--GGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCS-LSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDF-------SCSTGDALQCRDPSCP 145
BLAST of CV998101 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.905e-21 Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 92 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCP 526 F+ A T + N C +WP AG P+ GGF+L + +I +P +GR W R GC F+ G G C TGDCGG L C+ + G PPATLAE T+G QDFYD+S++DG+N+AM CS + + CP Sbjct: 14 FAAGASAATFNIKNNCGSTIWP-----AGIPV--GGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCS-LSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDF-------SCSTGDALQCRDPSCP 145
BLAST of CV998101 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.761e-20 Identity = 59/148 (39.86%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 92 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCP 526 F+ A T + N C +WP AG P+ GGF L + +I +P +GR W R GC F+ G G C TGDCGG L C+ + G PPATLAE T+G QDFYD+S++DG+N+AM CS + + CP Sbjct: 14 FAAGASAATFNIKNNCGFTIWP-----AGIPV--GGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCS-LSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDF-------SCSTGDALQCRDPSCP 145
BLAST of CV998101 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.491e-19 Identity = 55/162 (33.95%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 92 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKS 574 F+ + A T T+ N C + VWP + GG +L + +T+ +P SGR WGR GC F+ G G C TGDC G+L C G PATLAE ++G + D+YD+S++D YN+AM CS + + CP + + +C + Sbjct: 15 FAASASAATFTITNNCGYTVWPAA-------IPVGGGQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFNG-GSGSCQTGDCAGALSCTLSG--QPATLAEFSIGGEHDYYDISVIDVYNLAMDF-------SCSTGDALQCRDSSCPDAYHQPDDPKTHSCNT 159
BLAST of CV998101 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13 Identity = 44/99 (44.44%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 110 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQ 403 A + N+C + VW +AG P GG +L + +T+ L S RFWGR GC FDASG+G C TGDCG L C + G+ PATLAE T Q Sbjct: 19 AVKFDIKNQCGYTVW-----AAGLP---GGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCT-VSGAVPATLAEYTQSDQ 108 The following BLAST results are available for this feature:
BLAST of CV998101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV998101 ID=CV998101; Name=CV998101; organism=Citrus sinensis; type=EST; length=897bpback to top |