CV998091

Overview
NameCV998091
Unique NameCV998091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: ETFA_MYCTU (Electron transfer flavoprotein subunit alpha OS=Mycobacterium tuberculosis GN=etfA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 6.097e-46
Identity = 103/236 (43.64%), Postives = 147/236 (62.29%), Query Frame = -3
Query:  178 IISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 885
            ++ A+ + GK +  R AA +    + DV+++      V  I+ G      +  G  P ++TVRA +       AE  +       V++ A  E++   +   +  +   +RP+L  A IVV GGRG+ SAENF ++E LA+ LGAAVGA+RA VD+G+ P   QVGQTGK V+P+LY+A G+SGAIQH AGM+ SK IVAVNKD +APIF++ADYG+VGDLF+V P+L E    +K
Sbjct:   90 VLIAATADGKEIAGRLAARIGSGLLVDVVDVREGGVGVHSIFGGAFTVEAQANGDTP-VITVRAGAV-----EAEPAAGAGEQVSVEVPAAAENAARIT--AREPAVAGDRPELTEATIVVAGGRGVGSAENFSVVEALADSLGAAVGASRAAVDSGYYPGQFQVGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADYGVVGDLFKVAPQLTEAIKARK 317          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: ETFA_MYCLE (Electron transfer flavoprotein subunit alpha OS=Mycobacterium leprae GN=etfA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.169e-43
Identity = 97/236 (41.10%), Postives = 147/236 (62.29%), Query Frame = -3
Query:  178 IISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 885
            ++ A+ + GK +  R AA +    + DV+++   +  V  ++ G  +   +  G  P ++TVRA +       A+          V++ A  E++   +        +  RPDL  A +VV+GGRG+ SA+NF ++E LA+ LGAAVGA+RA VD+G+ P   Q+GQTGK V+P+LY+A G+SGAIQH AGM+ SK IVAVNKD +APIF++AD+G+VGDLF+V P+L +    +K
Sbjct:   90 VLLAATADGKEIGGRLAARIGSGLLVDVVDVREGAVGVHSVFGGVFIVEAQANGDTP-VITVRAGAV-----EAQPAEGAGEQVSVEVPAPAENATKITARAPAVVDN--RPDLTEATVVVSGGRGVGSADNFSVVEALADSLGAAVGASRAAVDSGYYPGQFQIGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADFGVVGDLFKVAPQLTDGIKARK 317          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: ETFA_CLOTS (Electron transfer flavoprotein subunit alpha OS=Clostridium thermosaccharolyticum GN=etfA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.244e-40
Identity = 99/258 (38.37%), Postives = 148/258 (57.36%), Query Frame = -3
Query:  178 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV----IEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 939
            E +AK +  + +  K   I+  +   G+++ PR A+ L      D     I+ +G     RP + GN + T++     P M TVR       K   E       + + D    + D   +++ +    +     +L  A I+V+GGRG+   + F +I++LA+  G  VGA+RA VDAG++ +D QVGQTGK V P+LY+A G+SGAIQHLAGM +S  IVA+NK+ DAPIF+ ADYG+VGDLF+VIP L+E+  + K
Sbjct:   78 EGYAKAISELAKEYKPEVILYGATFIGRDLAPRIASRLMTGLTADCTGLDIDENGLLLQTRPAFGGNLMATIKCPDKRPQMSTVRPGVI---KELLEMIQEMGKVIKFDADINESDI--RTKILSIAKEAKNVVNLEEADIIVSGGRGIGGPDGFNIIKELADVRGGVVGASRATVDAGWITSDHQVGQTGKTVRPKLYIACGISGAIQHLAGMSNSGTIVAINKNPDAPIFKFADYGIVGDLFKVIPVLIEEIKKLK 330          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_CLOSA (Protein fixB OS=Clostridium saccharobutylicum GN=fixB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.232e-39
Identity = 92/257 (35.80%), Postives = 144/257 (56.03%), Query Frame = -3
Query:  184 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEI-----SGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPE 939
            + + K++  +    K   +   +   G+++ PR AA L+     D   I     +G     RP + GN + T+      P M TVR   F    +   +      + +V++   + D   K   +  + +D    D+  A+I+V GGRG+ S ENF+++ +LA+ LG  V  +RA V+ G++ N  QVGQTGK V P +Y+A G+SGAIQH+AGM+DS +I+A+NKD  API +VADYG+VGD+  V+PEL+ +  E
Sbjct:   79 DAYTKVICDLANERKPGILFVGATFIGRDLGPRVAARLNTGLTADCTSIDVEVENGDLLATRPAFGGNLMATIACPEHRPQMATVRPGVFEKVNTDGAN----CKVEKVEVKLTNNDLRTKVLEIIKSKKDIV--DISEAKIIVAGGRGVGSKENFELLGELAKVLGGTVAGSRAAVEKGWIENAYQVGQTGKTVKPSIYIACGISGAIQHVAGMQDSDMIIAINKDETAPIMKVADYGIVGDVKNVLPELIAQAKE 329          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: ETFA_CLOAB (Electron transfer flavoprotein subunit alpha OS=Clostridium acetobutylicum GN=etfA PE=3 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 2.100e-38
Identity = 94/262 (35.88%), Postives = 147/262 (56.11%), Query Frame = -3
Query:  199 SDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQ-----FVRPIYAGNALCTVRYTGANPCMLTVRATSFP-MPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELL 966
            ++  A+   + +AK++  +    K   +   +   G+++ PR AA L      D   +    +       RP + GN + T+  +   P M TVR   F  +P + A    +      + L+A D     +++  K      +  D+G A+++V GGRG+ S ENF+ +E+LA  LG  + A+RA ++  +V  DLQVGQTGK V P LY+A G+SGAIQHLAGM+DS  I+A+NKD +API +VAD  +VGD+ +V+PEL+
Sbjct:   71 NELLAHFSTDGYAKVICDLVNERKPEILFIGATFIGRDLGPRIAARLSTGLTADCTSLDIDVENRDLLATRPAFGGNLIATIVCSDHRPQMATVRPGVFEKLPVNDANVSDDKIEKVAIKLTASDI----RTKVSKVVKLAKDIADIGEAKVLVAGGRGVGSKENFEKLEELASLLGGTIAASRAAIEKEWVDKDLQVGQTGKTVRPTLYIACGISGAIQHLAGMQDSDYIIAINKDVEAPIMKVADLAIVGDVNKVVPELI 328          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: ETFA_MEGEL (Electron transfer flavoprotein subunit alpha OS=Megasphaera elsdenii GN=etfA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.757e-36
Identity = 93/259 (35.91%), Postives = 143/259 (55.21%), Query Frame = -3
Query:  178 WAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQ-----FVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFK--MIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 933
            +AK++      EK +  +  + + G+++ PR A  L      D  ++          + RP   GN +  +      P M TVR   F  P++        A+   ++  A   D+   +++V+      E   +  A ++V GGRG+ S E FK  ++++ A+ LG AVGA+RA VDAG++    QVGQTGK V P++Y+A  +SGAIQ LAGM  S  I+A+NKD DAPIF+V DYG+VGD+F+V+P L E   ++K
Sbjct:   82 YAKVICDFFHEEKPNVFLVGATNIGRDLGPRVANSLKTGLTADCTQLGVDDDKKTIVWTRPALGGNIMAEIICPDNRPQMGTVRPHVFKKPEADPS-----ATGEVIEKKANLSDADFMTKFVELIKLGGEGVKIEDADVIVAGGRGMNSEEPFKTGILKECADVLGGAVGASRAAVDAGWIDALHQVGQTGKTVGPKIYIACAISGAIQPLAGMTGSDCIIAINKDEDAPIFKVCDYGIVGDVFKVLPLLTEAIKKQK 335          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_AZOVI (Protein fixB OS=Azotobacter vinelandii GN=fixB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 8.260e-35
Identity = 94/257 (36.58%), Postives = 143/257 (55.64%), Query Frame = -3
Query:  190 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQF-----VRPIYAGNALCTVRYTGAN-PCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKS-RYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKF 939
            EP+ K +  +    +   ++  + + G+++    A  L    + D  E+   ++       RP + G+ LC       + P M TVR     MP+  A   S    I +V  S ++ D I K   ++   ++D  +P+L  A I+V GGRGL++ ENF+++  LA+ LGA VGA+R +V AG+   D QVGQ+GK V P+LY+A G+SGAIQH  GM  + VI+A+N D +APIF  A YG+VG+   V+P L E F
Sbjct:   99 EPYTKALTDLVTATQPEILMLGATTLGRDLAGSVATTLGTGLVADCTELVIDTETRNLASTRPTFDGSLLCKPSSAQRHRPQMATVRPR-MAMPEPDA---SRSGEIIEVPFSMIETDIITKVLEFIPDDTRD--KPNLPFADIIVAGGRGLRNQENFQLVWDLAKVLGAEVGASRPIVQAGWAELDRQVGQSGKTVRPKLYIAAGISGAIQHRVGMDGADVIIAINTDPNAPIFDFAHYGIVGNAITVLPALTEAF 349          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_BRAJA (Protein fixB OS=Bradyrhizobium japonicum GN=fixB PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 4.099e-34
Identity = 89/254 (35.04%), Postives = 132/254 (51.97%), Query Frame = -3
Query:  190 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV----IEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKF 939
            E + K +  +    K   ++  + + G+++    A  L      D     ++  GS    RP + G+ LCT+      P M TVR    PMP   A    + A I    L  +++D + K        +DAE   L  A +VV GG GL S ENF+++ +LA  LGA  G +R +V  G+V +D Q+GQTGK + P+LY+A G+SGAIQH  G+  + +IVAVN D +APIF  A   +V D  +++P L   F
Sbjct:  106 ESYTKALTELVNTYKPEILLLGATTLGRDLAGSVATNLSTGLTADCTTLDVDADGSLAATRPTFGGSLLCTIYTLNYRPQMATVRPRVMPMP---ARVMRDAARIVVHPLGLVEDDIVTKVLSFL-PDRDAETSTLAYADVVVAGGLGLGSPENFRLVRELAALLGAEYGCSRPLVQKGWVTSDRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADLIVAVNTDKNAPIFDFAHLAIVSDAMQLLPALTAAF 355          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_AZOC5 (Protein fixB OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=fixB PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 4.099e-34
Identity = 89/254 (35.04%), Postives = 136/254 (53.54%), Query Frame = -3
Query:  190 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEIS----GSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKF 939
            E + K +  +    K   ++  + + G+++    A  L      D  E+     GS    RP + G+ LCT+      P M TVR    PMP+   E +  G  I+   L  +++D + K        +D+ + +L  A +VV GG GL S ENF+++ +LA  LGA  G +R +V  G+V +D Q+GQTGK + P+LY+A G+SGAIQH  G+  + +IVA+N D +APIF  A  G+V D   ++P L E F
Sbjct:  106 EAYTKALTDVVNTYKPEILLLGATTLGRDLAGSVATTLLTGLTADCTELDVDADGSLAATRPTFGGSLLCTIYTLNYRPQMATVRPRVMPMPER--EEKPIGRIITH-PLGMVEDDIVTKILSFL-PDRDSAKSNLAYADVVVAGGLGLGSPENFQLVRQLAGVLGAEYGCSRPLVQKGWVTSDRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADMIVAINTDKNAPIFDFAHVGIVTDAIRLLPALTEAF 355          
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_RHIME (Protein fixB OS=Rhizobium meliloti GN=fixB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.249e-32
Identity = 86/257 (33.46%), Postives = 135/257 (52.53%), Query Frame = -3
Query:  181 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEIS----GSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 939
            EP+ K +  +    K   ++  + + G+++    A  L      D  E++    GS    RP + G+ LCT+      P M TVR +    P+    +R  G SI + DL  L+E+ I        +  D+   +L  A +VV GG GL + +N ++++ LA  LG   G +R +V  G++P D Q+GQTG  + P+LY+A G+SGA+QH  G+  S +IVA+N D +APIF  A  G+V D    +P L E F ++
Sbjct:   90 EPFTKALTDLVLANKPEILLLGATTLGRDLAGSVATTLKTGLTADCTELNVDSDGSLAATRPTFGGSLLCTIYTLKCRPQMATVRPSVMATPQRV--NRPTG-SIIRHDLKMLEEE-IATKVLAFFSDCDSTIANLAYADVVVAGGLGLGAVQNLQLLKDLARTLGGDFGCSRPLVQKGWMPFDRQIGQTGNTIRPKLYIAAGISGAVQHRVGVEGSDLIVAINTDPNAPIFDFAHLGVVADAISFLPALTEVFTKR 342          
The following BLAST results are available for this feature:
BLAST of CV998091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
ETFA_MYCTU6.097e-4643.64Electron transfer flavoprotein subunit alpha OS=My... [more]
ETFA_MYCLE2.169e-4341.10Electron transfer flavoprotein subunit alpha OS=My... [more]
ETFA_CLOTS2.244e-4038.37Electron transfer flavoprotein subunit alpha OS=Cl... [more]
FIXB_CLOSA4.232e-3935.80Protein fixB OS=Clostridium saccharobutylicum GN=f... [more]
ETFA_CLOAB2.100e-3835.88Electron transfer flavoprotein subunit alpha OS=Cl... [more]
ETFA_MEGEL9.757e-3635.91Electron transfer flavoprotein subunit alpha OS=Me... [more]
FIXB_AZOVI8.260e-3536.58Protein fixB OS=Azotobacter vinelandii GN=fixB PE=... [more]
FIXB_BRAJA4.099e-3435.04Protein fixB OS=Bradyrhizobium japonicum GN=fixB P... [more]
FIXB_AZOC54.099e-3435.04Protein fixB OS=Azorhizobium caulinodans (strain A... [more]
FIXB_RHIME2.249e-3233.46Protein fixB OS=Rhizobium meliloti GN=fixB PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_D-6_T7 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC48_H06_034, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998091 ID=CV998091; Name=CV998091; organism=Citrus sinensis; type=EST; length=968bp
TTTTTTTTTTTTTTTTTACTTATAACTTTTTTATCTCACCCGAAATTATT
TATAAAAAAAAAATCAGCAATGTATTATTTCTTTTATCACTTATTTTTTA
GCAATTGGACCTGGAATTTGAGCGCGCACACATCTATTTTTTCTCCGGGA
CCTGGAATTTGAGCGCGCACACATCTATTTTTTCTCCGGGAACTTTTCTA
GCAACTCTGGAATCACTTCAAAAAGATCGCCAACGAGTCCGTAGTCAGCT
ACCTGGAAAATTGGTGCATCTGCATCCTTATTTACAGCAACAATGACCTT
AGAATCTCTCATGCCAGCTAAATGTTGAATGGCTCCTGAAACACCAAAAG
CCATATACAATTCTGGAGCAACAATTTTCCCGGTTTGACCGACCTGTAGA
TCATTAGGAACAAATCCAGCATCAACTACAGCACGAGTAGCCCCAACTGC
TGCCCCAAGTTTCTCCGCAAGCTTTTCTATCATTTTGAAGTTCTCAGCAC
TTTTCAAACCTCGTCCCCCAGTGACTACAATACGTGCACTTCCAAGATCA
GGGCGTTCTGCATCCTGAGATGTATGCTTTACATATCTAGATTTTCCAAT
AGAATCTTCATCTAAAGCTGAGAGATCAACCTGGGAAATAGAAGCCCCAT
TAGATCTTGATTCAGCTGAACTCTTGGGCATTGGGAAAGATGTGGCTCTG
ACGGTCAACATACAAGGGTTGGCACCAGTGTATCGAACTGTACACAGCGC
ATTTCCAGCATAAATTGGCCTGACGAATTGACTAGAACCAGAAATTTCAA
TAACATCAGTAATTGGAGAAACATCCAATAGTGCAGCTGCACGAGGAAGT
ACGTTTTTGCCGAATGAACCTGAAGCAGAAATTATGTGCGAGTATTTTTC
TCTCTGCTGAATCATATGGACTAGTTTAGCCCAAGGTTCAGCAATAGGAT
ATGCAAATTTATCTGAAT
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