CV998091
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_RHISN (Protein fixB OS=Rhizobium sp. (strain NGR234) GN=fixB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.116e-31 Identity = 87/258 (33.72%), Postives = 132/258 (51.16%), Query Frame = -3 Query: 181 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV----IEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAE-RPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 939 EP+ K + + K ++ + + G+++ A L D ++ GS RP + G+ LCT+ P M TVR MP+ S + + + D L+ED + K V S D +L A +VV GG GL +AEN +I+ LA +G G +R +V G++P D Q+GQTGK + P+LY+A G+SGA+QH G+ + +IVA+N D APIF A G+V D +P L E F ++ Sbjct: 106 EPFTKALTDLVITHKPEILLLGATTLGRDLAGSVATTLLTGLTADCTGLDVDEDGSLAATRPTFGGSLLCTIYTLNCRPQMATVRPRVMRMPQRSNKPIGR---VIRHDWRMLEEDIVTK--VVGFLSDDRSGNANLAYADVVVAGGLGLSNAENLLLIKDLALTIGGDYGCSRPLVQKGWMPADRQIGQTGKTIRPKLYIAAGISGAVQHRVGVEGADLIVAINTDPHAPIFDFAHVGVVTDAVSFLPALTEAFTKR 358
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: YDIR_ECOLI (Putative electron transfer flavoprotein subunit ydiR OS=Escherichia coli (strain K12) GN=ydiR PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.256e-23 Identity = 53/124 (42.74%), Postives = 82/124 (66.13%), Query Frame = -3 Query: 193 AERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDA-GFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEK 561 A DL A+ VV GRGL + ++ KM+ +LA L A VG +R + + ++ + +G +G ++ +LY+ G+SG IQH+ G +KVIVA+NKD +APIF ADYGLVGD+++V+P L+ + Sbjct: 186 ASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQ 309
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: ETFA_METME (Electron transfer flavoprotein subunit alpha OS=Methylophilus methylotrophus GN=etfA PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23 Identity = 64/180 (35.56%), Postives = 101/180 (56.11%), Query Frame = -3 Query: 202 VRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAP-ELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 738 V + G + +LT+R + F P A S +S VD ++ S K D D+ + +++ GRG+ N + +LA++ GA + +R + DAG++P QVGQ+GK+V +LY+A G+SG+IQH+AGM+ I+AVN D A IF +A YG+V D+F++ EL Sbjct: 144 VDFPGKSTVVLTIRPSVFK-PLEGAGS----PVVSNVDAPSVQSRSQNKDYVEVGGGNDI---DITTVDFIMSIGRGIGEETNVEQFRELADEAGATLCCSRPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEEL 315
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_ESCF3 (Protein fixB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fixB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.616e-22 Identity = 53/121 (43.80%), Postives = 80/121 (66.12%), Query Frame = -3 Query: 190 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKF 549 DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L F Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAF 311
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_ECO24 (Protein fixB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fixB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.110e-22 Identity = 52/118 (44.07%), Postives = 80/118 (67.80%), Query Frame = -3 Query: 199 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELL 549 DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L+ Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALI 308
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_SHISS (Protein fixB OS=Shigella sonnei (strain Ss046) GN=fixB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.600e-22 Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = -3 Query: 202 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 549 DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_SHIFL (Protein fixB OS=Shigella flexneri GN=fixB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.600e-22 Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = -3 Query: 202 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 549 DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_SHIDS (Protein fixB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fixB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.600e-22 Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = -3 Query: 202 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 549 DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_ECOUT (Protein fixB OS=Escherichia coli (strain UTI89 / UPEC) GN=fixB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.600e-22 Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = -3 Query: 202 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 549 DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_ECOSM (Protein fixB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fixB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.600e-22 Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = -3 Query: 202 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 549 DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307 The following BLAST results are available for this feature:
BLAST of CV998091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV998091 ID=CV998091; Name=CV998091; organism=Citrus sinensis; type=EST; length=968bpback to top |