CV998091
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_SALPA (Protein fixB OS=Salmonella paratyphi A GN=fixB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.019e-22 Identity = 76/251 (30.28%), Postives = 127/251 (50.60%), Query Frame = -3 Query: 202 AKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEIS---GSSQFVRPIYAGNALCTVRYTGANP-CMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERP---DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 930 A + I+Q + ++ + GK + + L + D ++S G + +Y G A+ T A+P ++T+ + +F + A SRS Q A V T+ A + DL AR+VV+ GRG+ S EN + E L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G ++ I A+NKD +APIFQ AD+G+VGD +++P L Sbjct: 69 AAMAETIRQHSEGGAVLLPNTRRGKLLAAKLGYRLSAAVSNDASDVSLQDGKAAVKHMVYGGLAIGAE--TIASPFAVITLSSGTFDAQQPDA-SRSGEMHTVQWQAPATA---------VTRTATQARQSNSVDLDKARLVVSVGRGIGSKENISLAEALCQTIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANGAQTIFAINKDKNAPIFQYADFGIVGDALKILPAL 307
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_SALA4 (Protein fixB OS=Salmonella agona (strain SL483) GN=fixB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.019e-22 Identity = 76/251 (30.28%), Postives = 127/251 (50.60%), Query Frame = -3 Query: 202 AKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEIS---GSSQFVRPIYAGNALCTVRYTGANP-CMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERP---DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 930 A + I+Q + ++ + GK + + L + D ++S G + +Y G A+ T A+P ++T+ + +F + A SRS Q A V T+ A + DL AR+VV+ GRG+ S EN + E L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G ++ I A+NKD +APIFQ AD+G+VGD +++P L Sbjct: 69 AAMAETIRQHSEGGAVLLPNTRRGKLLAAKLGYRLSAAVSNDASDVSLQDGKAAVKHMVYGGLAIGAE--TIASPFAVITLSSGTFDAQQPDA-SRSGEMHTVQWQAPATA---------VTRTATQARQSNSVDLDKARLVVSVGRGIGSKENISLAEALCQTIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANGAQTIFAINKDKNAPIFQYADFGIVGDALKILPAL 307
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: FIXB_ECOLU (Protein fixB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fixB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.019e-22 Identity = 51/117 (43.59%), Postives = 79/117 (67.52%), Query Frame = -3 Query: 202 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVD-AGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 549 DL AR+VV+ GRG+ S +N + E+L + +GA + +R V + ++ ++ VG + ++ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L Sbjct: 191 DLDKARLVVSVGRGIGSKDNIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
BLAST of CV998091 vs. ExPASy Swiss-Prot
Match: YGCQ_ECOLI (Putative electron transfer flavoprotein subunit ygcQ OS=Escherichia coli (strain K12) GN=ygcQ PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.414e-18 Identity = 78/238 (32.77%), Postives = 126/238 (52.94%), Query Frame = -3 Query: 199 QREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDL--SALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELL 906 QR ++ G+FG + R A L + I V + + VR + GNAL T P L++ + +A++ + + + Q+++ AL D + + +K+ ++D L AR V+ G+G A+N + I LAEKLGA VG +RA V G V + +G +G ++APE+ + G SGA +AG+R+SK +VA+N DA A +F AD G+V D ++V+ E L Sbjct: 53 QRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQA-----GAAKNATLPSGMQQLNIVPGALP-DWLVSTEDLKNVTRDP----LAEARRVLVVGQG-GEADN-QEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDD-WKVVLEAL 277 The following BLAST results are available for this feature:
BLAST of CV998091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV998091 ID=CV998091; Name=CV998091; organism=Citrus sinensis; type=EST; length=968bpback to top |