CV998089

Overview
NameCV998089
Unique NameCV998089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.663e-14
Identity = 48/156 (30.77%), Postives = 82/156 (52.56%), Query Frame = 3
Query:   60 NTSKGYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 488
            N   G ++ ELF D  P+T + F  LC  +KG         ++K   FH V+K++++Q G  S+      E    G    +      ++ F++    + KD+ G + +ITT P P L+   +VFG+V+ G++VV+EIE   TD   +P ++V I++
Sbjct:   18 NQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILS 173          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.663e-14
Identity = 48/156 (30.77%), Postives = 82/156 (52.56%), Query Frame = 3
Query:   60 NTSKGYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 488
            N   G ++ ELF D  P+T + F  LC  +KG         ++K   FH V+K++++Q G  S+      E    G    +      ++ F++    + KD+ G + +ITT P P L+   +VFG+V+ G++VV+EIE   TD   +P ++V I++
Sbjct:   18 NQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILS 173          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.663e-14
Identity = 48/156 (30.77%), Postives = 82/156 (52.56%), Query Frame = 3
Query:   60 NTSKGYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 488
            N   G ++ ELF D  P+T + F  LC  +KG         ++K   FH V+K++++Q G  S+      E    G    +      ++ F++    + KD+ G + +ITT P P L+   +VFG+V+ G++VV+EIE   TD   +P ++V I++
Sbjct:   18 NQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILS 173          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.663e-14
Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 3
Query:   72 GYIIVELFKDGSPETVDKFIDLC--QKG--------YFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 488
            G I  ELF D  P+T + F  LC  +KG        +FKG SFH VIK++++Q G  +       E     K   +    P  + F++    +  ++ G + +ITT   P L++K +VFG+++ G+ +V++IE  +T E  +PK  V I++
Sbjct:   18 GKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVD 168          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.784e-14
Identity = 44/144 (30.56%), Postives = 72/144 (50.00%), Query Frame = 3
Query:   60 NTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 485
            +TS G   VEL+   +P+T   F  L Q+GY+  + FH +I N+++Q G               K   ++R   KH    I ++ +   ++ G + ++T AP P L+ K  +FGRV  G  V+Q +  V T+   +P  +V II
Sbjct:    8 DTSMGSFTVELYNSHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNGEDRPVDEVKII 151          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 4.784e-14
Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 3
Query:   72 GYIIVELFKDGSPETVDKFIDLC--QKGY---------FKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 488
            G I+ +LF D  P+T   F+ LC  +KG          +KG +FH V+KN++IQ G  S+      E    G  + +        AF++    + K + G + +ITT P P L+   +VFG V+ G +V+++IE + TD   +P +DV +I+
Sbjct:   21 GRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVID 172          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.784e-14
Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 3
Query:   72 GYIIVELFKDGSPETVDKFIDLC--QKGY---------FKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 488
            G I+ +LF D  P+T   F+ LC  +KG          +KG +FH V+KN++IQ G  S+      E    G  + +        AF++    + K + G + +ITT P P L+   +VFG V+ G +V+++IE + TD   +P +DV +I+
Sbjct:   21 GRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVID 172          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 43/149 (28.86%), Postives = 78/149 (52.35%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHE-AFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 497
            ++T++G I ++L+ + +P+ V  F    + GY+    FH +IKN++IQ G         E   +     ++  + KH+  F +    S  ++ G + +ITT   P L+ K  +F R   G DVV  IE+ +TD++ +P     IIN+++
Sbjct:  459 IHTTQGDISIKLYPEEAPKAVQNFTTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDKYDRPLEPTKIINISI 607          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEA-FMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLK 500
            + T+ G I + LF D +P+ V+ F    + GY+  + FH VIK ++IQ G         E         +     +H+  + +    +  ++ G + +IT AP   L++K  VFGRV  G DVV  IE    D+  +P  D+ IIN+ ++
Sbjct:  481 IRTTSGDIHMRLFPDAAPKAVENFTTHAKNGYYDNLIFHRVIKGFMIQTGCPFGDGTGGESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVHSIESAKVDKTNKPLDDIKIINIDIR 630          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.066e-13
Identity = 43/144 (29.86%), Postives = 72/144 (50.00%), Query Frame = 3
Query:   60 NTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 485
            +TS G   VEL+ + +P+T   F  L Q+GY+  + FH +I N+++Q G               K   ++    KH    + ++ +   ++ G + +IT AP P L+ K  +FGRV  G  V+Q +  V T+   +P  +V II
Sbjct:    8 DTSMGSFTVELYNEHAPKTCRNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNSEDRPVDEVKII 151          
The following BLAST results are available for this feature:
BLAST of CV998089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PPIG_RAT3.663e-1430.77Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE3.663e-1430.77Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN3.663e-1430.77Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
PPID_YARLI3.663e-1431.79Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPIL1_ASPOR4.784e-1430.56Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
NKTR_MOUSE4.784e-1432.24NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN4.784e-1432.24NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
CYP9_SCHPO6.248e-1428.86Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]
CYP15_RHIOR6.248e-1430.00Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPIL1_ASPFU1.066e-1329.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_D-5_T7 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC47_G06_036, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998089 ID=CV998089; Name=CV998089; organism=Citrus sinensis; type=EST; length=822bp
GATCAAGGATGATGCCTATGCGGTTTCAAGAAGTTTGATCTTCCTGGCCA
TGCTGTTTAAATACATCTAAAGGTTATATAATAGTGGAACTCTTCAAAGA
TGGTTCACCAGAAACCGTGGATAAATTTATTGACTTGTGTCAAAAGGGGT
ACTTCAAAGGTATGTCTTTCCATCATGTGATCAAAAACTATGTCATTCAA
GCTGGGCATTCCAAGGATCTTGCAGCTGCTGATGAATGGACATCAAGAGG
GAAGATCCGCAGTCAGCTGAGGACCAGTCCGAAGCATGAGGCGTTTATGA
TTGGAACTGTAAAATCTAAAGACAGCAAAGGATTTGAGCTATACATTACA
ACTGCACCAATACCAGATTTAAATGATAAGCTTATTGTGTTTGGACGAGT
AGTGAAGGGTGAGGATGTGGTGCAGGAAATTGAAGAGGTGGATACAGATG
AGCACTATCAGCCTAAGTCAGATGTAGGGATCATCAATGTGACACTAAAG
CATGCAATATGAGGATGTATGCTAAGCTACCGAAAAGATTTTACACCTAG
CCAAGTTTCTTGTTGTGCTATTGATTTTCGTATTAATCTTGTATTGCTGC
TGCTAGAACGCTTGGTTCAGGTTTTCTTTCTTGTCTCTCCCCGTTTATTG
TACTGCAGGGAGAGAAGGGTTCAAAGAAATGTTGTTGCATTGTTCAAAAA
AGTAAAGGTTTGTACTTCTTAGTAGGCAAAATACACAATTTTGTCAATTT
CATATTGAAATTTTTCTTGTAAAATTTCATGAGAAAATGTTTTTAACTTA
TTGCGGCCTTTTAAAGGTGAAA
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