CV998089

Overview
NameCV998089
Unique NameCV998089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.392e-13
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 485
            L TS G I++EL+   +P+T   F +L ++GY+ G  FH +IK+++IQ G               +   +L    K     I  + +   D+ G + ++T AP   L+ K  +FGRV +G  +V  +  V+T+   +P  DV II
Sbjct:   16 LETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.392e-13
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 485
            L TS G I++EL+   +P+T   F +L ++GY+ G  FH +IK+++IQ G               +   +L    K     I  + +   D+ G + ++T AP   L+ K  +FGRV +G  +V  +  V+T+   +P  DV II
Sbjct:   16 LETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.374e-13
Identity = 43/145 (29.66%), Postives = 73/145 (50.34%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 485
            L TS G I++EL+   +P+T   F +L ++GY+ G  FH +IK+++IQ G               +   +L    K     I  + +   D+ G + ++T AP   L+ K  +FGRV +G  +V  +  V+T+   +P  DV I+
Sbjct:   16 LETSMGVIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIL 160          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 41/145 (28.28%), Postives = 74/145 (51.03%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 485
            + T+ G   +EL+ + +P+T   F  L  +GY+    FH +IK+++IQ G               K   ++    KH    + ++ +   ++ G + +IT AP P L+ K  +FGRV KG  V++ +  V TD+  +P ++V I+
Sbjct:    7 VETTMGTFTLELYTNHAPKTCKNFATLADRGYYDSTVFHRIIKDFMIQGGDPTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVIRRMGMVPTDKEDRPATEVKIV 151          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 43/150 (28.67%), Postives = 77/150 (51.33%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTL 497
            L+T  G I +ELF + +P+T + F+ LC   Y+ G  FH  IK +++Q G               K   +     KH    + ++ +   ++ G + +IT    P L+ K  VFG+V+ G + + E+E++  +E  Y+P +DV I ++T+
Sbjct:    5 LHTDVGDIKIELFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPLGTGKGGTSIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 3
Query:   18 MRFQEV*SSWPCCLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTD-EHYQPKSDVGIINVTL 497
            +R+Q V       L+T+KG + +EL  D +P+T + FI LC+K Y+ G  FH  I+N+VIQ G         E       + + R +  H    I ++ +   +S   + +IT      L+ K  +FGRVV G DV+  +E V++D +  +PK ++ I   T+
Sbjct:  271 LRYQFVKKKGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTV 433          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 44/154 (28.57%), Postives = 74/154 (48.05%), Query Frame = 3
Query:   60 NTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKHAI*G 515
            +TS G   VEL+   +P+T + F  L ++GY+ G+ FH +I N++IQ G               +   ++    +     I  + +   ++ G + +IT AP P L+ K  +FGRV  G   +Q +E V TD+  +P  ++ I    L  A  G
Sbjct:   12 DTSVGSFTVELYTAHAPKTCNNFAKLAERGYYNGVIFHRIIPNFMIQGGDPTGTGRGGTSIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEAVRTDKDDRPVEEIKIHRARLGDATQG 165          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 43/148 (29.05%), Postives = 72/148 (48.65%), Query Frame = 3
Query:   60 NTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 497
            +TS G   VEL+   +P+T   F  L Q+GY+  + FH +I N+++Q G               K   ++  + KH    I ++ +   ++ G + +IT AP P L+ K  +FGRV  G  V+Q +  V T+   +P   V I+   +
Sbjct:    8 DTSMGSFTVELYNAHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRMGLVKTNSEDRPVDGVKILRARI 155          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTL 497
            L+T  G I +E+F + +P+T + F+ LC   Y+ G  FH  IK +++Q G               K   +     KH    + ++ +   ++ G + +IT    P L+ K  VFG+V+ G + + E+E++  +E  Y+P +DV I ++T+
Sbjct:    5 LHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRGGSSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13
Identity = 42/133 (31.58%), Postives = 71/133 (53.38%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTD 449
            L+TS G I +EL+ D +P T   F +L ++GY+ G+SFH +I +++IQ G               +   ++    +H    I ++ +   ++ G + +IT AP P L+ K  +FGRV  G +VV+ +  V TD
Sbjct:    9 LDTSMGSIHIELYWDHAPRTCKNFYELAKRGYYDGVSFHRIIADFMIQGGDPTGTGRGGTSIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSDGMNVVKRMGLVKTD 141          
The following BLAST results are available for this feature:
BLAST of CV998089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PPIL1_HUMAN1.392e-1330.34Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN1.392e-1330.34Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPIL1_MOUSE2.374e-1329.66Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_NEUCR3.101e-1328.28Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL3_CHICK6.907e-1328.67Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL2_HUMAN6.907e-1331.29Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL1_CRYNE6.907e-1328.57Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPIL1_ASPNG6.907e-1329.05Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL3_MOUSE9.021e-1328.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL1_RHIOR9.021e-1331.58Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_D-5_T7 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC47_G06_036, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998089 ID=CV998089; Name=CV998089; organism=Citrus sinensis; type=EST; length=822bp
GATCAAGGATGATGCCTATGCGGTTTCAAGAAGTTTGATCTTCCTGGCCA
TGCTGTTTAAATACATCTAAAGGTTATATAATAGTGGAACTCTTCAAAGA
TGGTTCACCAGAAACCGTGGATAAATTTATTGACTTGTGTCAAAAGGGGT
ACTTCAAAGGTATGTCTTTCCATCATGTGATCAAAAACTATGTCATTCAA
GCTGGGCATTCCAAGGATCTTGCAGCTGCTGATGAATGGACATCAAGAGG
GAAGATCCGCAGTCAGCTGAGGACCAGTCCGAAGCATGAGGCGTTTATGA
TTGGAACTGTAAAATCTAAAGACAGCAAAGGATTTGAGCTATACATTACA
ACTGCACCAATACCAGATTTAAATGATAAGCTTATTGTGTTTGGACGAGT
AGTGAAGGGTGAGGATGTGGTGCAGGAAATTGAAGAGGTGGATACAGATG
AGCACTATCAGCCTAAGTCAGATGTAGGGATCATCAATGTGACACTAAAG
CATGCAATATGAGGATGTATGCTAAGCTACCGAAAAGATTTTACACCTAG
CCAAGTTTCTTGTTGTGCTATTGATTTTCGTATTAATCTTGTATTGCTGC
TGCTAGAACGCTTGGTTCAGGTTTTCTTTCTTGTCTCTCCCCGTTTATTG
TACTGCAGGGAGAGAAGGGTTCAAAGAAATGTTGTTGCATTGTTCAAAAA
AGTAAAGGTTTGTACTTCTTAGTAGGCAAAATACACAATTTTGTCAATTT
CATATTGAAATTTTTCTTGTAAAATTTCATGAGAAAATGTTTTTAACTTA
TTGCGGCCTTTTAAAGGTGAAA
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