CV998089

Overview
NameCV998089
Unique NameCV998089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13
Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 3
Query:   78 IIVELFKDGSPETVDKFIDLC----------QKGYFKGMSFHHVIKNYVIQAGHSKDLAAAD----EWTSRGKIRSQLRTSPKHEAFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 488
            I++EL+ D  P T + F  LC          Q   F+   FH VI  ++IQ G   D   AD    E     K + +  T      F++    +  ++ G + +ITT P P L+ K +VFGRV+KG+ VV+ +E V+T    +PK DV I++
Sbjct:   34 IVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGG---DFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVESVETVASDRPKEDVKIVD 182          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTL 497
            L+T  G I +E+F + +P+T + F+ LC   Y+ G  FH  IK +++Q G               K   +     KH    + ++ +   ++ G + +IT    P L+ K  VFG+V+ G + + E+E++  +E  Y+P +DV I ++T+
Sbjct:    5 LHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRGGSSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTL 497
            L+T  G I +E+F + +P+T + F+ LC   Y+ G  FH  IK +++Q G               K   +     KH    + ++ +   ++ G + +IT    P L+ K  VFG+V+ G + + E+E++  +E  Y+P +DV I ++T+
Sbjct:    5 LHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 485
            L TS G I++EL+ + +P+T   F  L ++GY+ G+ FH VI ++VIQ G               K   ++ +   H    I ++ +   ++   + +IT AP P L+ K  +FGRVV G  V + +  + TD   +P   + II
Sbjct:    6 LQTSLGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKII 150          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 3
Query:   66 SKGYIIVELFKDGSPETVDKFIDLC--QKG--------YFKGMSFHHVIKNYVIQAGHSKDLAAAD----EWTSRGKIRSQLRTSPKHEAFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 488
            S G I +EL+ D  P+T D F  LC  +KG        ++KG  FH VIK ++IQ G   D  A D    E     K   +       + F++    +  ++ G + +ITT P P L+ K +VFG V+ G+ VV++IE + T    +P  +  I++
Sbjct:   23 SVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGG---DFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVD 175          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 44/150 (29.33%), Postives = 78/150 (52.00%), Query Frame = 3
Query:   69 KGYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAG---HSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSD 473
            KG ++ EL+ D  P+T + F  LC  +KG         ++KG  FH +IK+++ Q G   H   +     +  + +  +   T  K   F++    +  ++ G + +ITT P P LN K +VFG V++G+ +V+++E  D  E+ +P  D
Sbjct:   21 KGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDK--PFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVED 168          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.539e-12
Identity = 47/157 (29.94%), Postives = 82/157 (52.23%), Query Frame = 3
Query:   57 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRG-------KIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGED-VVQEIEEVDTDEHYQPKSDVGIINVTL 497
            L+T  G I +E+F +  P+T + F+ LC  GY+   +FH  I  ++IQ  H          T +G       K   ++R++ KH +  I ++ +   ++ G + +IT A  P L+ K  VFG+V+ G D  +  +E+V  DE ++P  +  I +VT+
Sbjct:    5 LHTDLGDIKIEVFCEAVPKTAENFLALCASGYYDNNTFHRNIPGFMIQV-HEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKVPVDEKHRPLQEFRIKSVTI 160          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.010e-12
Identity = 49/163 (30.06%), Postives = 83/163 (50.92%), Query Frame = 3
Query:   18 MRFQEV*SSWPCCLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTD-EHYQPKSDVGIINVTL 497
            +R+Q V       L+T+KG + +EL  D +P+T + FI LC+K Y+ G  FH  I+N+VIQ G         E       + + R +  H    + ++ +   ++   + +IT      L+ K  +FGRVV G D +  +E V++D +  +PK +V I   T+
Sbjct:  271 LRYQFVKKKGYVRLHTNKGDLNLELHCDLTPKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTDRPKEEVLICTTTV 433          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12
Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 3
Query:   72 GYIIVELFKDGSPETVDKFIDLC--QKG--------YFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEA-FMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGI 482
            G I  ELF D  P+T + F  LC  +KG        +FKG  FH VIK ++IQ G           +  G+         KH+  F++    S   + G + +ITT P P L+ K +VFG V+ G+ VV++IE + T    +P +DV I
Sbjct:   21 GRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQAD-KPTTDVTI 168          
BLAST of CV998089 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12
Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 3
Query:   66 SKGYIIVELFKDGSPETVDKFIDLCQ----KGYFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRS---QLRTSPKHEAFMIGTVKSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGI 482
            S G I++ L+ D  P+TV+ F  LC     KGY KG  FH VIKN++IQ G  ++      E     K      QL+ +  ++  M      +D+ G + +ITT     L+ K +VFG V++G+D+V  IE   T     PK D+ I
Sbjct:   44 SLGKIVMGLYGDVVPKTVENFRALCTGETGKGY-KGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANA--GRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITI 187          
The following BLAST results are available for this feature:
BLAST of CV998089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PPID_USTMA9.021e-1332.89Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPIL3_RAT1.178e-1228.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN1.178e-1228.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL1_SCHPO1.178e-1230.34Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPID_GIBZE1.178e-1232.05Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPID_DEBHA1.178e-1229.33Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPIL3_RHIOR1.539e-1229.94Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
PPIL2_MOUSE2.010e-1230.06Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPID_EMENI4.477e-1234.23Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPIB_YARLI4.477e-1234.69Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_D-5_T7 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC47_G06_036, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998089 ID=CV998089; Name=CV998089; organism=Citrus sinensis; type=EST; length=822bp
GATCAAGGATGATGCCTATGCGGTTTCAAGAAGTTTGATCTTCCTGGCCA
TGCTGTTTAAATACATCTAAAGGTTATATAATAGTGGAACTCTTCAAAGA
TGGTTCACCAGAAACCGTGGATAAATTTATTGACTTGTGTCAAAAGGGGT
ACTTCAAAGGTATGTCTTTCCATCATGTGATCAAAAACTATGTCATTCAA
GCTGGGCATTCCAAGGATCTTGCAGCTGCTGATGAATGGACATCAAGAGG
GAAGATCCGCAGTCAGCTGAGGACCAGTCCGAAGCATGAGGCGTTTATGA
TTGGAACTGTAAAATCTAAAGACAGCAAAGGATTTGAGCTATACATTACA
ACTGCACCAATACCAGATTTAAATGATAAGCTTATTGTGTTTGGACGAGT
AGTGAAGGGTGAGGATGTGGTGCAGGAAATTGAAGAGGTGGATACAGATG
AGCACTATCAGCCTAAGTCAGATGTAGGGATCATCAATGTGACACTAAAG
CATGCAATATGAGGATGTATGCTAAGCTACCGAAAAGATTTTACACCTAG
CCAAGTTTCTTGTTGTGCTATTGATTTTCGTATTAATCTTGTATTGCTGC
TGCTAGAACGCTTGGTTCAGGTTTTCTTTCTTGTCTCTCCCCGTTTATTG
TACTGCAGGGAGAGAAGGGTTCAAAGAAATGTTGTTGCATTGTTCAAAAA
AGTAAAGGTTTGTACTTCTTAGTAGGCAAAATACACAATTTTGTCAATTT
CATATTGAAATTTTTCTTGTAAAATTTCATGAGAAAATGTTTTTAACTTA
TTGCGGCCTTTTAAAGGTGAAA
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