CV998087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998087 vs. ExPASy Swiss-Prot
Match: AMN1_HUMAN (Protein AMN1 homolog OS=Homo sapiens GN=AMN1 PE=2 SV=4) HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11 Identity = 50/174 (28.74%), Postives = 86/174 (49.43%), Query Frame = 3 Query: 198 CPSLRVLSL----WNTSSVGDEGLCEIANGCHQLEKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSS-ATYSLEKVKLQR-LNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTIT 701 C L+ L+L N SV EG+ +A+ C L + L +C +TD ++ +A NC L + + C SI + L A+G+ CP L+ + + V D G+ +L+S LE++ + +N+TD ++ + Y + L G P +++ V+ G KLK +T T Sbjct: 84 CRKLKKLNLNASKGNRVSVTSEGIKAVASSCSYLHEASLKRCCNLTDEGVVALALNCQLLKIIDLGGCLSITDVSLHALGKNCPFLQCVDFSATQ-VSDSGVIALVSGPCAKKLEEIHMGHCVNLTDGAVEAVLTYCPQIRILLFHGCPLITDHSREVLEQLVGPNKLKQVTWT 256 HSP 2 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 59/206 (28.64%), Postives = 105/206 (50.97%), Query Frame = 3 Query: 207 LRVLSLWNTSSVGDEGLCEIANGCHQLEKLDLCQCPAITDRALITIAKNCPKLIDLTIESCS----SIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQR-LNITDVSLAVIGHYG--MAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDN 803 ++++S+ + D + EI + +++ LDL C I+D AL+ ++ NC KL L + + S+ +EG++AV C L S+K C + D+G+ +L + L+ + L L+ITDVSL +G + D T VS+ G + SG +KL+ + + C+ +TD +EAV CP ++ C ++D+ Sbjct: 41 IKIMSM--QGQITDSNISEILHP--EVQTLDLRSCD-ISDAALLHLS-NCRKLKKLNLNASKGNRVSVTSEGIKAVASSCSYLHEASLKRCCNLTDEGVVALALNCQL-LKIIDLGGCLSITDVSLHALGKNCPFLQCVDFSAT---QVSDSGVIALVSGPCAKKLEEIHMGHCVNLTDGAVEAVLTYCPQIRILLFHGCPLITDH 236
BLAST of CV998087 vs. ExPASy Swiss-Prot
Match: FXL16_HUMAN (F-box/LRR-repeat protein 16 OS=Homo sapiens GN=FBXL16 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 54/214 (25.23%), Postives = 104/214 (48.60%), Query Frame = 3 Query: 234 SSVGDEGLCEIANGCHQLEKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRL-NITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRI 872 S++ D GL + + +L+L C T+ L + ++ L++ C ++ ++ + A+ + PNL +S++ V D +A + +S ++L IT+ + + H +T L L+G V++ G ++ L+KL+SL ++ C +TD+ LE V L++ L +C ++D GL S+ SL SL L C ++ Sbjct: 203 STITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLS--ARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYH-VTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDGVELVAEN--LRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGL-SYLSTMSSLRSLYLRWCCQV 410 HSP 2 Score: 70.0922 bits (170), Expect = 1.898e-11 Identity = 54/187 (28.88%), Postives = 86/187 (45.99%), Query Frame = 3 Query: 318 ITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVI-GHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRIT 875 ITD L + + ++ L + C+ GL + + S+S+ DC V D IA++ S +L ++ LQ ++TD +LA G + L L ++ G V+ H L L +L+++ C VTD G+E V + L+ L C ++D L A LE L L+ C RIT Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWS--SLSARITSLSVSDCINVADDAIAAI-SQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHG--VVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRIT 386
BLAST of CV998087 vs. ExPASy Swiss-Prot
Match: AMN1_RAT (Protein AMN1 homolog OS=Rattus norvegicus GN=Amn1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 57/181 (31.49%), Postives = 94/181 (51.93%), Query Frame = 3 Query: 282 QLEKLDLCQCPAITDRALITIAKNCPKLIDLTIESC----SSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQR-LNITDVSLAVIGHYG--MAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDN 803 ++++LDL C I+D AL + K C KL L ++SC +SI +EG++AV C +L IS+K C V D+G+ +L + L+ + L L+ITD SL +G + D T VS+ G + SG ++L+ + + C+ +TD +EA CP + C ++D+ Sbjct: 62 EVQRLDLRSCN-ISDVALQHLCK-CRKLKALNLKSCREHRNSITSEGIKAVASSCSDLHEISLKGCCSVTDEGVLALALNCQL-LKIIDLGGCLSITDESLHALGKNCPFLQCVDFSTT---QVSDNGVVALVSGPCAKQLEEINMGYCINLTDKAVEAALTACPQICILLFHGCPLITDH 236 HSP 2 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 47/172 (27.33%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 198 CPSLRVLSLWNT----SSVGDEGLCEIANGCHQLEKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSS-ATYSLEKVKL-QRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLT 695 C L+ L+L + +S+ EG+ +A+ C L ++ L C ++TD ++ +A NC L + + C SI +E L A+G+ CP L+ + + V D G+ +L+S LE++ + +N+TD ++ + L G P +++ V+ G +KLK +T Sbjct: 84 CRKLKALNLKSCREHRNSITSEGIKAVASSCSDLHEISLKGCCSVTDEGVLALALNCQLLKIIDLGGCLSITDESLHALGKNCPFLQCVDFSTTQ-VSDNGVVALVSGPCAKQLEEINMGYCINLTDKAVEAALTACPQICILLFHGCPLITDHSREVLEQLIGSRKLKQVT 254
BLAST of CV998087 vs. ExPASy Swiss-Prot
Match: FB37_ARATH (F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 53/173 (30.64%), Postives = 76/173 (43.93%), Query Frame = 3 Query: 33 GYLSRSLEGKKATDIRLAAIAVGTASRGGLGKLSIHGNNSTRGVTSAGLRAIARGCPSLRVLSL--WNTSSVGDEGLCEIANGCHQL-------------------------EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCR 470 G + LE + +D+ L+AI+ ++ S+H T T+ GL AIA C LR L + W + +GDEGL +A C QL E+L LC C D L IA CP L L I++C I + G++ + CP L + IK C+ Sbjct: 260 GVVEIHLERMQVSDVALSAISYCSSLE------SLH-LVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNC-PISDVGIENLANGCPGLTKVKIKKCK 424
BLAST of CV998087 vs. ExPASy Swiss-Prot
Match: FBL15_ARATH (F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 58/257 (22.57%), Postives = 106/257 (41.25%), Query Frame = 3 Query: 162 VTSAGLRAIARGCPSLRVLSLWNTSSVGDEGLCEIANGCHQLEKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPH--------VSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAV------GKGCPNLKQF-----CLRKCAFLSDNGLISFAKAAFSLESLQLEECHRIT 875 +T + ++ CP LR LSL ++ + + C L+ LD+ C + D A+ + A +CP+L L + +CS + +E L+ + + C NL ++ C SLE V L L + + H +T +T + + + S H L +L+S+++ C TDL L+++ CP L++ LR+ A L + SL+ + L +C ++ Sbjct: 336 ITKCRVMRLSIRCPQLRSLSLKRSN------MSQAMLNCPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHILNASYC--------------PNISLESVHLPMLTVLKL------HSCEGITSASMTWIANSPALEVLELDNCNLLTTVSLH-LSRLQSISLVHCRKFTDLNLQSIMLSSITVSNCPALRRITITSNALRRLALQKQENLTTLVLQCHSLQEVDLSDCESLS 565
BLAST of CV998087 vs. ExPASy Swiss-Prot
Match: AMN1_DANRE (Protein AMN1 homolog OS=Danio rerio GN=amn1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 56/200 (28.00%), Postives = 98/200 (49.00%), Query Frame = 3 Query: 207 LRVLSLWNTSSVGDEGLCEIAN-GCHQLEKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLN-ITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSD 800 LR+++ + T V D + ++ + G H L DL C I+D AL I N L + + C+ I +EGL+ + CP L+ + + C V D GI +L LE + L+ + ++D +L +G + ++ +G V+++G + +G LK L + C +TDL + AV C N++ F C ++D Sbjct: 37 LRIMTSYGT--VTDSNISQLVHSGTHTL---DLQNCK-ISDSALKQI--NSLHLRTILLRGCAEITSEGLEVLAPRCPYLQVVDLTGCTAVTDSGIQALARHCK-CLEVISLRGCSALSDKALLELGGNCKMLHSIYFSG-TEVTDQGVIGLATGVCSCSLKELQMVRCRNLTDLAVTAVLTNCANIRIFNFHGCPLITD 226
BLAST of CV998087 vs. ExPASy Swiss-Prot
Match: AMN1_BOVIN (Protein AMN1 homolog OS=Bos taurus GN=AMN1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 58/193 (30.05%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 240 VGDEGLCEIANGCHQLEKLDLCQCPAITDRALITIAKNCPKLIDLTIESCS----SIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQR-LNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDN 803 + D + EI + +++ LDL C I+D AL+ + NC KL L ++S SI ++G++AV C L S+K C + D+G+ +L + L+ + L L ITDVSL +G A VS+ G + SG +KL+ + + C+ +TD +EAV CP + C ++D+ Sbjct: 50 ITDSNISEILHP--EVQTLDLRSCD-ISDTALLHLC-NCRKLKKLNLKSSKENRISITSKGIKAVASSCSYLHEASLKRCCNLTDEGVLALALNCRL-LKIIDLGGCLGITDVSLQALGE-NCAFLQCVDFSATQVSDHGVVALVSGPCAKKLEEIHMGHCVNLTDEAVEAVLTCCPQICILLFHGCPLITDH 236 The following BLAST results are available for this feature:
BLAST of CV998087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV998087 ID=CV998087; Name=CV998087; organism=Citrus sinensis; type=EST; length=882bpback to top |