CV998077

Overview
NameCV998077
Unique NameCV998077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOL6 (Uncharacterized aminotransferase yfbQ OS=Escherichia coli O6 GN=yfbQ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.812e-20
Identity = 68/248 (27.42%), Postives = 113/248 (45.56%), Query Frame = 1
Query:   85 YAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y +RG ++  A+RL++E          +++L  NIGNP   G                            F A   E    ++  +P      Y  S+G+   R  I    +AR        DI++ +G S  +   MQ L+ S  D +L P P YPL++A+++L  G  V Y  DE++ W  +  +++ ++          R +V+INP NPTG V ++E    IVE  ++  L++ ADE+Y + +Y
Sbjct:   15 YDIRGPVLKEAKRLEEE---------GNKVLKLNIGNPAPFG----------------------------FDAPD-EILVDVIRNLP--TAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNS-GDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPR------TRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILY 215          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: AAT_STRVG (Aspartate aminotransferase OS=Streptomyces virginiae GN=aspC PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 47/155 (30.32%), Postives = 82/155 (52.90%), Query Frame = 1
Query:  364 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y+ + G+  L+  IAA      G+  + + + +T+G   A++     ++    D ++ P P +  Y  SI L GG  V    DE TG+ +      +QLEAA+ +    + ++ ++P NPTG V +E + +AI E+  + GL +L DE+Y+  VY
Sbjct:   62 YTPAGGLPELKAAIAAKTLRDSGYEVEASQVLVTNGGKQAIYEAFAAIL-DPGDEVIVPAPYWTTYPESIRLAGGVPVDVVADETTGYRVSV----EQLEAARTE--RTKVVLFVSPSNPTGSVYSEADAKAIGEWAAEHGLWVLTDEIYEHLVY 209          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: AAT_AQUAE (Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.291e-14
Identity = 47/155 (30.32%), Postives = 79/155 (50.97%), Query Frame = 1
Query:  364 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y+ S GI  LR+ IA  +   +     P++I ++ GA   + ++   ++  E D +L P P +  Y   I   GG  V   L +  G+ L   +VK+++          +A+V+ +P NPTG V  EE  + I EFC + G+ +++DE Y+  VY
Sbjct:   65 YAPSAGIPELREAIAEKLLKENKVEYKPSEIVVSAGAKMVLFLIFMAIL-DEGDEVLLPSPYWVTYPEQIRFFGGVPVEVPLKKEKGFQLSLEDVKEKVTER------TKAIVINSPNNPTGAVYEEEELKKIAEFCVERGIFIISDECYEYFVY 212          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: 1A17_ARATH (1-aminocyclopropane-1-carboxylate synthase 7 OS=Arabidopsis thaliana GN=ACS7 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.905e-14
Identity = 45/166 (27.11%), Postives = 86/166 (51.81%), Query Frame = 1
Query:  343 PG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPA--DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            PG R    +    G+K  R  +A+ +E   G  A  DP+ I LT GA+ A + ++  ++   ND +L P P YP +   +    G  +VP + D +  + +    ++   + A+   I VR +++ NP NP G  + ++    +++FC ++ + L++DE+Y  +V+
Sbjct:   89 PGFRENALFQDYHGLKTFRQAMASFMEQIRGGKARFDPDRIVLTAGAT-AANELLTFILADPNDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNHFQITPEALESAYQTARDANIRVRGVLITNPSNPLGATVQKKVLEDLLDFCVRKNIHLVSDEIYSGSVF 253          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: AAT_BACST (Aspartate aminotransferase OS=Bacillus stearothermophilus GN=aspC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13
Identity = 47/157 (29.94%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  364 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR--ALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y+ S G+  L++ I        G   +P ++ +  GA  A++ + Q+L+  E D ++ P P +  Y   + L GG  VP Y++     GLE +  K   E  K + IT R  A+++ +P NPTG +   E  +A+ E C   G+++++DE+Y++  Y
Sbjct:   63 YTPSGGLPALKEEIIKKFARDQGLDYEPAEVIVCVGAKHALYTLFQVLL-DEGDEVIIPTPYWVSYPEQVKLAGG--VPVYVE-----GLEQNHFKITPEQLK-QAITPRTKAVIINSPSNPTGMIYTAEELKALGEVCLAHGVLIVSDEIYEKLTY 210          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: AAT_PYRAB (Aspartate aminotransferase OS=Pyrococcus abyssi GN=aspC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13
Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = 1
Query:  364 YSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y  + G+  LR+ IA  ++ ++   ADPN +I +  GA+ A  M +   ++ + + +L P P +  Y+ ++ L GG  V     E   + L   E+KK +          +AL++ +P NPTG VL +++   I +F  +  L++++DEVY+  +Y
Sbjct:   59 YGPNIGLPELREAIAEKLKKQNNIEADPNKEIMVLVGANQAFLMGLSAFLK-DGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEENEFRLNVDELKKYVTEK------TKALIINSPCNPTGSVLKKKDLEEIADFAVEHDLIVISDEVYEHFIY 207          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: YUGH_BACSU (Putative aminotransferase yugH OS=Bacillus subtilis GN=yugH PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.250e-13
Identity = 45/157 (28.66%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  361 AYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            +Y+ + G+  LR+ I+  +  R      P N++ +T GAS A+ + ++ ++ +  + ++ P P +  Y A ++L GG  +P ++      G + +      EAA  +    +A+++ +P NPTG V ++E    I EF KK  +++LADE+Y E  Y
Sbjct:   60 SYTANAGLYSLREEISRYLSNRFDLSYSPDNELIVTVGASQALDIAIRAIV-NPGEEVIIPEPCFVAYDALVSLAGG--IPVHVHTTADKGFKATAA--DFEAAVTE--KTKAILICSPSNPTGSVYSKEELNEIAEFAKKHDVIVLADEIYAELTY 209          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: AAT1_BACSU (Aspartate aminotransferase OS=Bacillus subtilis GN=aspB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.061e-12
Identity = 46/157 (29.30%), Postives = 82/157 (52.23%), Query Frame = 1
Query:  364 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT--VRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y+ S G+  L+++IA   +        P+ I +  GA  A++ + Q+++  E D ++ P P +  Y   + L GG   P Y++     GLE +  K   E  K   IT   +A+V+ +P NPTG +  EE   A+ E C +  +++++DE+Y++  Y
Sbjct:   63 YTPSGGLAELKNSIAEKFKRDQNIEYKPSQIIVCTGAKHALYTLFQVIL-DEEDEVIIPTPYWVSYPEQVKLAGGK--PVYVE-----GLEENHFKISPEQLK-NAITEKTKAIVINSPSNPTGVMYTEEELSALGEVCLEHDILIVSDEIYEKLTY 210          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: 1A1C_SOYBN (1-aminocyclopropane-1-carboxylate synthase OS=Glycine max GN=ACS1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12
Identity = 45/163 (27.61%), Postives = 75/163 (46.01%), Query Frame = 1
Query:  349 RATGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            RA   +    G+   R+ +A  +    G     DP+ I ++ GA+ A H +    +    D  L PIP YP +   +    G  LVP   D +  + L    ++   E AK   I V+ L++ NP NP G V+     R ++ F  ++ + L++DE+Y   V+
Sbjct:   85 RAIANFQDYHGLPEFRNAVAKFMGRTRGNRVTFDPDRIVMSGGATGA-HEVTTFCLADPGDAFLVPIPYYPGFDRDLRWRTGIKLVPVMCDSSNNFKLTKQALEDAYEKAKEDNIRVKGLLITNPSNPLGTVMDRNTLRTVMSFINEKRIHLVSDEIYSATVF 246          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: 1A16_ARATH (1-aminocyclopropane-1-carboxylate synthase 6 OS=Arabidopsis thaliana GN=ACS6 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.515e-12
Identity = 40/130 (30.77%), Postives = 65/130 (50.00%), Query Frame = 1
Query:  442 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            DP+ I ++ GA+ A H  +   + +  DG L P P YP +   +    G  LVP     + G+ +    ++   E A+   I V+ L+V NP NP G  L  E  +++V F   +G+ L+ADE+Y    +
Sbjct:  121 DPDRIVMSGGATGA-HETVAFCLANPGDGFLVPTPYYPGFDRDLRWRTGVNLVPVTCHSSNGFKITVEALEAAYENARKSNIPVKGLLVTNPSNPLGTTLDRECLKSLVNFTNDKGIHLIADEIYAATTF 249          
The following BLAST results are available for this feature:
BLAST of CV998077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
YFBQ_ECOL67.812e-2027.42Uncharacterized aminotransferase yfbQ OS=Escherich... [more]
AAT_STRVG3.397e-1530.32Aspartate aminotransferase OS=Streptomyces virgini... [more]
AAT_AQUAE1.291e-1430.32Aspartate aminotransferase OS=Aquifex aeolicus GN=... [more]
1A17_ARATH4.905e-1427.111-aminocyclopropane-1-carboxylate synthase 7 OS=Ar... [more]
AAT_BACST1.427e-1329.94Aspartate aminotransferase OS=Bacillus stearotherm... [more]
AAT_PYRAB7.082e-1328.85Aspartate aminotransferase OS=Pyrococcus abyssi GN... [more]
YUGH_BACSU9.250e-1328.66Putative aminotransferase yugH OS=Bacillus subtili... [more]
AAT1_BACSU2.061e-1229.30Aspartate aminotransferase OS=Bacillus subtilis GN... [more]
1A1C_SOYBN2.691e-1227.611-aminocyclopropane-1-carboxylate synthase OS=Glyc... [more]
1A16_ARATH3.515e-1230.771-aminocyclopropane-1-carboxylate synthase 6 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_CTMN-5_T3 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC05_E01_007, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998077 ID=CV998077; Name=CV998077; organism=Citrus sinensis; type=EST; length=832bp
TCCCCTTCTTCTTCTTCAATGGCTCCCACCTCTTCTCCTGCTATCACGGT
CGATTCCCTTAACCCCAAGGTTCTAAAATGCGAGTATGCTGTTCGTGGTG
AGATTGTCTCCATTGCCCAGCGGTTGCAACAAGAGTTACAAACTAACCCT
GGCTCTCATTCCTTTGATGAGATACTGTACTGCAACATTGGAAATCCTCA
GTCTCTTGGTCAGCAGCCAATAACCTTTTTCCGAGAGGTTCTTGCATTAT
GTGACCATCCATCCATTTTGGACAGAAGTGAAACACAAGGTTTGTTCAGT
GCGGATTCTATAGAGCGAGCTTGGCAGATACTGGATCAAATTCCTGGGCG
AGCAACTGGGGCTTACAGTCATAGTCAGGGTATCAAGGGACTGCGTGATA
CAATCGCTGCTGGAATTGAGGCTCGTGATGGTTTTCCTGCTGATCCAAAT
GATATTTTCTTGACAGATGGTGCAAGTCCTGCTGTCCACATGATGATGCA
GTTATTGATAAGATCAGAGAACGATGGAATTCTCTGTCCTATTCCTCAGT
ACCCTTTATACTCTGCTTCAATTGCTCTCCATGGTGGGACCTTGGTGCCT
TACTACCTAGATGAAGCAACAGGATGGGGATTGGAAACTTCGGAGGTTAA
GAAGCAATTGGAGGCCGCCAAGGCCAAAGGTATTACCGTTAGGGCCTTGG
TTGTAATAAATCCAGGCAATCCAACTGGACAGGTTCTTGCTGAAGAAAAC
CAGCGTGCAATTGTGGAGTTCTGCAAAAAGGAGGGTCTTGTTCTTCTTGC
AGATGAGGTATACCAGGAAAATGTTTATGTGC
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