EY665715

Overview
NameEY665715
Unique NameEY665715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8020 contig Csv1_Contig8020:1..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.619e-48
Identity = 93/166 (56.02%), Postives = 112/166 (67.47%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESG----QGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 488
            GT DFIFG++A VFQ+C+I  R P  GQKN +TAQGR+D N+NT I +   ++TA S     +GS K++LGRPWK YSRTV M+  ID  IDPAGW PW G FALSTLYYGEY N G GA TS RV W G+ VI+   EA +FTV   + G  W+  TGV F   L
Sbjct:  392 GTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTFQEWL 557          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.762e-48
Identity = 88/160 (55.00%), Postives = 111/160 (69.38%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDS 482
            GT DFIFG+AA VFQ C I  R+P+ GQ+NT+TAQGRKDPN+NTGI +HN  +         +++LGRPWK +S TV MK  +D  I+P GWLPW+G  A  T++Y EY+N G GAST  RVKW G     +  EA KFTV  F+ GN+W+PAT VPF+S
Sbjct:  403 GTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDIQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFNS 562          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.050e-47
Identity = 91/166 (54.82%), Postives = 112/166 (67.47%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAE----SGQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 488
            GT DFIFG+AA VFQ+CN+Y RKP+  Q N +TAQGR DPN+NTG  + N  +       S   + K+YLGRPWK+YSRTV+M+  IDG ++P GW  W+G FALSTLYY EY N G G++T+ RV W GYHVI S  +A  FTV        WI  TGVP+ SGL
Sbjct:  413 GTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.988e-47
Identity = 93/166 (56.02%), Postives = 109/166 (65.66%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTA----ESGQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 488
            GT DFIFG+AA VFQ C I  RKP   QKN VTAQGR DPN+ TG  +    + A    E     +K+YLGRPWK++SRTV M+  +DG IDP+GW  W G FAL TLYYGE+MN G GA TS RVKW GYHVI  P EA  FTV   + G SW+ +T V +  GL
Sbjct:  377 GTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.209e-47
Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQ----GSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPW-SGS-FALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 488
            GT DFIFG+AAAVFQ+C I  R+P+ GQ N +TAQGR DP +NTGI +HNSR+          G+ K+Y+GRPW ++SRTV ++  +D V+ P GW PW  GS F L TL+Y EY N G  +ST  RV W G+HV+    +A  FTVG F+AG +W+P TG+PF SGL
Sbjct:  369 GTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.209e-47
Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQG----SFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 488
            GT DFIFG+AAA+FQ+CNIY RKP+  QKN +TA GR DPN+NTGI + N  + A         S  ++LGRPWK YSRTVFM+  I  ++ P GWL W+G+  L T+YYGEY N G GA+T+ RV+W GY+++ +  EA  FTV NF  G++W+P T +PF  GL
Sbjct:  451 GTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLL-NLAEAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 91/162 (56.17%), Postives = 112/162 (69.14%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 488
            GT DFIFG+ AAV Q+C IY R P+  QK T+TAQGRK PN+NTG ++ NS V A        +YLGRPWK YSRTV+M   +  ++ P GWL W G+FAL TL+YGEY NIG G  +SGRVKW GYH++     A  FTVG+F+ G  W+PATGV F +GL
Sbjct:  386 GTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ-----PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 186.422 bits (472), Expect = 1.516e-46
Identity = 91/166 (54.82%), Postives = 109/166 (65.66%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQG----SFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 488
            GT DFIFG+AA VFQ C +  RKP   Q+N VTAQGR DPN+ TG  +    + A S        F +YLGRPWK+YSRTV M+  + G+I+PAGW  W G FAL TLYYGE+MN G GA TS RVKW GYHVI  P +A  FTV   + G SW+ +TGV +  GL
Sbjct:  379 GTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.585e-46
Identity = 87/163 (53.37%), Postives = 108/163 (66.26%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAES-----GQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPF 476
            GT DFIFGDA  VFQ+C I  +K +  QKN++TAQGRKDPNE TGI +    +TA+S        S  +YLGRPWK YSRTV M+  +  VI P GWL W+G FAL++L+YGEYMN G GA    RVKW GY V     +A  +TV  F+ GN W+P+TGV +
Sbjct:  354 GTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKY 516          
BLAST of EY665715 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.585e-46
Identity = 84/166 (50.60%), Postives = 112/166 (67.47%), Query Frame = 3
Query:    3 GTQDFIFGDAAAVFQSCNIYIRKPIGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQGSF----KSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 488
            GT DFIFGD   VFQ+C I  ++ +  QKNT+TAQGRKD N+ +G  +  S ++A++    +    ++YLGRPWK YSRTVF++ N+  V+ P GWL W+  FAL TL+YGE+MN G G+  S RVKW GYHV  +  +A  FTV  F+ GN W+P+TGV F  GL
Sbjct:  358 GTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
The following BLAST results are available for this feature:
BLAST of EY665715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
PME18_ARATH1.619e-4856.02Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME46_ARATH2.762e-4855.00Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME7_ARATH1.050e-4754.82Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME3_SOLLC3.988e-4756.02Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME59_ARATH5.209e-4752.98Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME25_ARATH5.209e-4753.01Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME22_ARATH6.803e-4756.17Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME1_SOLLC1.516e-4654.82Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME_PRUPE2.585e-4653.37Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME44_ARATH2.585e-4650.60Probable pectinesterase/pectinesterase inhibitor 4... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665715 ID=EY665715; Name=EY665715; organism=Citrus sinensis; type=EST; length=790bp
ATGGAACCCAAGACTTCATATTTGGGGACGCAGCAGCTGTTTTCCAAAGC
TGCAACATCTACATAAGAAAACCAATAGGCGGCCAAAAGAACACTGTCAC
AGCACAAGGAAGAAAAGACCCTAACGAAAACACAGGCATCATTGTTCATA
ATTCTAGGGTTACGGCGGAGTCGGGTCAGGGATCGTTCAAGAGTTATTTA
GGCAGGCCATGGAAGCAATATTCAAGAACTGTGTTTATGAAGTGTAATAT
CGATGGAGTGATTGATCCAGCTGGTTGGTTGCCGTGGAGTGGGAGTTTTG
CTTTGAGCACTCTTTATTATGGTGAGTATATGAACATCGGAACCGGTGCA
AGCACTAGTGGGAGGGTGAAATGGTCCGGGTATCATGTTATACGGAGCCC
CGTGGAGGCCGGGAAGTTTACGGTTGGAAACTTTTTGGCCGGAAACTCTT
GGATTCCGGCGACCGGAGTGCCGTTTGATTCTGGTTTGTGAATTATCATC
AGGCGCACGCAGTTTGCTTTTAATAATGTTAGGGAAACAATAGTGTTTGT
CGTCATTTGTAAATGGGAAAAGGGATTCAACGTGTTCAAATTGTCGTATA
GTTTTTGTTGGTTGTTTTCATTTACACATATCATATAACTATACTAGGAG
ACGATGCTTTACCTGCACTTGTTGTTAAAGAATACAAGAAATTTGAATGA
ATACCTAATCTTATATCAATTTGTAATATATGTAATTGTGAAAATAAAAG
TGATATAATAACTTTTATTGTGAAAAAAAAAAAAAAAAAA
back to top