CV998073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.405e-67 Identity = 117/250 (46.80%), Postives = 160/250 (64.00%), Query Frame = 3 Query: 135 GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXL-PGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDCSQPRPY 878 G+ + I+S +++ L +++DA CPARGFYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG CY +++P SS PG+ Y+GRGPIQ++WN NY G+ALG D L NP+++A ++F++A+WFWMT + KPSCH+V++ E++P DV A R G+GL TNI+NGG+EC G+ V NRIGF+ +C G G NLDC +P+ Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.637e-61 Identity = 112/238 (47.06%), Postives = 146/238 (61.34%), Query Frame = 3 Query: 174 SREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLP--GQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDCSQPRPY 878 + MFE +LP RN+ CP +GFYTYDA+ A + +PGFG +G++ RKRE+AAFFAQT ET+G + WGYC + +++P +SD P YYGRGP+QL WN NY CG LG +LL+ P+ +ATDPVLSF++A+WFWM PSCHEVI EW PS D+ AGR PG+G+ TNII G EC G +NRI ++ +C PGDNL C + Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNP-NSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.792e-61 Identity = 119/256 (46.48%), Postives = 163/256 (63.67%), Query Frame = 3 Query: 150 GGELG--KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDCSQPRPYGPYLMAXS 902 GG G +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF AQT H T+ GG Y+WGYCY ++V A+SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G + +R+ F+ +C G G NLDC P+ +M+ S Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.792e-61 Identity = 119/256 (46.48%), Postives = 163/256 (63.67%), Query Frame = 3 Query: 150 GGELG--KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDCSQPRPYGPYLMAXS 902 GG G +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF AQT H T+ GG Y+WGYCY ++V A+SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G + +R+ F+ +C G G NLDC P+ +M+ S Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.873e-57 Identity = 113/240 (47.08%), Postives = 148/240 (61.67%), Query Frame = 3 Query: 159 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDCSQPRPY 878 + +IS +FE +L +R GFYTYDAFI AA++FP F +G+ +RKRE+AAF AQT HETTGGW AP G Y G ++SD Y+GRGPIQ+++N NY G+A+GVDLL NPDL+ +D + FK+A+WFWMT Q PKPS H+VI W PS+ D AGR+PGYG+ TNII+GG+ECG V +RIG++ DNLDC +P+ Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------STSD-------------YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 4.191e-41 Identity = 93/245 (37.96%), Postives = 140/245 (57.14%), Query Frame = 3 Query: 132 TGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYG-RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGND--AVR-NRIGFFTTFCGKFGDQPGDNL 854 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FP FG G+ RKRE+AAF A T+G +D +AWG C+I + +D G+ Y RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ G+D AVR + IGF+ +C G G +L Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.664e-38 Identity = 90/257 (35.02%), Postives = 127/257 (49.42%), Query Frame = 3 Query: 99 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS---DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDC 860 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P FG +G+ KREIAAFFA HET +CYI ++ S D YYGRGP+Q++WN NY G+++G D L +PD +A PVL+F++A+W+W + H+ + G+G T ING +EC AV NR+ ++ FC +FG PG NL C Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.152e-37 Identity = 99/271 (36.53%), Postives = 128/271 (47.23%), Query Frame = 3 Query: 96 NCGSGVVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQ----VSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDC 860 NC SG G T G G G + I+S+ F+ ++ + A CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C+I + V A D G+ YYGRGP+QL+WN NY G+A+G D L NP+ +ATD SFK+A+WFWMT +V++ G+G TT ING +EC D +RI F+ +C FG PGDNL C Sbjct: 55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 4.059e-36 Identity = 90/255 (35.29%), Postives = 130/255 (50.98%), Query Frame = 3 Query: 99 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDC 860 CG G G D G + I+++E F D + + A CP + FYT F+EA A+PGFG + RKREIAA+FA HET +A YC Q P + + +Y+GRGP+QL+WN NY+ G+ L D LN+PD++ DP++SFK+++WFW+ + VI+D P+ G+G T IINGG EC + R+G++ +C + G PG+NL C Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNK-----------EYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of CV998073 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.306e-34 Identity = 88/261 (33.72%), Postives = 133/261 (50.96%), Query Frame = 3 Query: 99 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGDQPGDNLDC 860 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +CYI +++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC + AV RI ++ +CG+ G PG NL C Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268 The following BLAST results are available for this feature:
BLAST of CV998073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV998073 ID=CV998073; Name=CV998073; organism=Citrus sinensis; type=EST; length=924bpback to top |