CV998068

Overview
NameCV998068
Unique NameCV998068
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1034
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6985 contig Csv1_Contig6985:511..1544. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: OYEC_SCHPO (Putative NADPH dehydrogenase C23G7.10c OS=Schizosaccharomyces pombe GN=SPBC23G7.10c PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.110e-15
Identity = 69/269 (25.65%), Postives = 114/269 (42.38%), Query Frame = -1
Query:  279 QVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDI--AQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHS----------LLPMRKAFK----GTFLVAGGYDRE--DGNKAIAEGRADLVVYGRLFLANPDL 1031
            Q++  + IV+  H++      Q+ H GR ++      G    +         +     D        P +LT  +  ++V+ F +AA+ A+E GFD IE+HGAHG+LI   +    NDR D+YGG+ E R  F +E+V +V   I          P    + + D  P+  G  + +++     L   + +  +  +   S   H            +P  +  K    G  L A G  R+    N+ +  G+AD+    R FL NP L
Sbjct:  108 QMKPLRRIVEFAHSQNQKIGIQLAHAGRKASTTAPYRGYTVATEAQGGWENDVYGPNEDRWDENHAQPHKLTEKQYDELVDKFVVAAKRAVEIGFDVIEIHGAHGYLISSTVSPATNDRNDKYGGTFEKRILFPMEVVHSVRKAIPDS------MPLFYRVTATDWLPKGQGWEIEDTV----ALAARLRDGGVDLIDVSSGGNHKDQRIEVKDCYQVPFAEKIKDQVNGILLGAVGMIRDGLTANEILESGKADVTFVAREFLRNPSL 366          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACCZ (NADPH dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=namA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.980e-15
Identity = 69/250 (27.60%), Postives = 113/250 (45.20%), Query Frame = -1
Query:  273 VHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 998
            +H  G     Q+ H GR +  +++ +  AP +    P    ++T          P  ++  +I   +  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:   92 IHDNGAKAAIQLAHAGRKA--ELETDALAPSAI---PFNETMKT----------PVEMSKHQIKDTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACCQ (NADPH dehydrogenase OS=Bacillus cereus (strain Q1) GN=namA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.980e-15
Identity = 70/250 (28.00%), Postives = 112/250 (44.80%), Query Frame = -1
Query:  273 VHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 998
            +H  G     Q+ H GR +  +++ +  AP +    P    ++           P  ++  +I   V  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI+E++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:   92 IHDNGAKAAIQLAHAGRKA--ELETDALAPSAI---PFNETMKM----------PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACC7 (NADPH dehydrogenase OS=Bacillus cereus (strain AH187) GN=namA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.778e-14
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = -1
Query:  525 VHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 998
            +H  G     Q+ H GR +  +++ +  AP +    P    ++           P  ++  +I   V  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI+E++ NE+    + +R+S       + D +P+ L
Sbjct:   92 IHDNGAKAAIQLAHAGRKA--ELETDALAPSAI---PFNETMKM----------PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACC1 (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=namA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.778e-14
Identity = 69/250 (27.60%), Postives = 112/250 (44.80%), Query Frame = -1
Query:  273 VHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 998
            +H  G     Q+ H GR +  +++ +  AP +    P    ++           P  ++  +I   V  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:   92 IHDNGAKAAIQLAHAGRKA--ELETDALAPSAI---PFNETMKM----------PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACAN (NADPH dehydrogenase OS=Bacillus anthracis GN=namA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.961e-14
Identity = 68/250 (27.20%), Postives = 112/250 (44.80%), Query Frame = -1
Query:  273 VHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 998
            +H  G     Q+ H GR +  +++ +  AP +    P    ++           P  ++  +I   +  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:   92 IHDNGAKAAIQLAHAGRKA--ELETDALAPSAV---PFNETMKI----------PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACAC (NADPH dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=namA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.961e-14
Identity = 68/250 (27.20%), Postives = 112/250 (44.80%), Query Frame = -1
Query:  273 VHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 998
            +H  G     Q+ H GR +  +++ +  AP +    P    ++           P  ++  +I   +  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:   92 IHDNGAKAAIQLAHAGRKA--ELETDALAPSAV---PFNETMKI----------PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACAA (NADPH dehydrogenase OS=Bacillus anthracis (strain A0248) GN=namA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.961e-14
Identity = 68/250 (27.20%), Postives = 112/250 (44.80%), Query Frame = -1
Query:  273 VHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 998
            +H  G     Q+ H GR +  +++ +  AP +    P    ++           P  ++  +I   +  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:   92 IHDNGAKAAIQLAHAGRKA--ELETDALAPSAV---PFNETMKI----------PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACWK (NADPH dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=namA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.173e-14
Identity = 72/257 (28.02%), Postives = 110/257 (42.80%), Query Frame = -1
Query:  273 VHAKGGIFFCQIGHVGRVSNQDIQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGL--------YMAE------SLNKYGILYCHM-VEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 998
            +H  G     Q+ H GR +  +      + I   D+   P                 +   +I + V+ F+ AA  +  AG D IELHGAHG+LI++F+    N R D+YGGS ENR RF  EI++AV NE+    + +R+S       + D +P+ L +        +M E        +   ++  H+ V P  +    K    H    +  A     L+  G   E   + +    ADL+  GR  L NP  PR
Sbjct:   92 IHNNGAKAAIQLAHAGRKAELETDAFAPSAIPFNDRMKIPV---------------EMNKQQIKETVSAFQKAALRSKRAGVDVIELHGAHGYLINEFLSPLSNKRIDEYGGSPENRYRFLREIIDAV-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTGWMKEQGVDLIDCSSGAVVPAHIDVYPGYQVQYAKHIKEH----VNIATGAVGLITTGSQAE---QILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CV998068 vs. ExPASy Swiss-Prot
Match: NAMA_BACLD (NADPH dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=namA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.756e-14
Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = -1
Query:  273 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGI----LYCHMVEPRMKTV--GEKSECPHSLLPMRKAFKGTF-LVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 836
            P  +T ++I + V  F+  A  A  AGFD IE+HGAHG+LI++F+    N R D+YGGS ENR R   E+++AV  E+ A  + +R+S  ++Y   G    + +G   A+ + + G+    +    V P    V  G +     ++    +   G   L+  G   E+    +  GRADL+   R  L +P  P+
Sbjct:  132 PVEMTKEDIKETVQAFKKGAERAKAAGFDIIEIHGAHGYLINEFLSPLSNKREDEYGGSPENRYRLLREVIDAV-KEVWAGPLFVRVSA-SDYKTKGLDVADYVG--FAKWMKEQGVDLIDVSSGAVVPADINVFPGYQVGFADTIRAQAEIQTGAVGLITSGLQAEE---ILQNGRADLIFVARELLRDPYWPK 319          
The following BLAST results are available for this feature:
BLAST of CV998068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
OYEC_SCHPO6.110e-1525.65Putative NADPH dehydrogenase C23G7.10c OS=Schizosa... [more]
NAMA_BACCZ7.980e-1527.60NADPH dehydrogenase OS=Bacillus cereus (strain ZK ... [more]
NAMA_BACCQ7.980e-1528.00NADPH dehydrogenase OS=Bacillus cereus (strain Q1)... [more]
NAMA_BACC71.778e-1432.91NADPH dehydrogenase OS=Bacillus cereus (strain AH1... [more]
NAMA_BACC11.778e-1427.60NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]
NAMA_BACAN3.961e-1427.20NADPH dehydrogenase OS=Bacillus anthracis GN=namA ... [more]
NAMA_BACAC3.961e-1427.20NADPH dehydrogenase OS=Bacillus anthracis (strain ... [more]
NAMA_BACAA3.961e-1427.20NADPH dehydrogenase OS=Bacillus anthracis (strain ... [more]
NAMA_BACWK5.173e-1428.02NADPH dehydrogenase OS=Bacillus weihenstephanensis... [more]
NAMA_BACLD6.756e-1431.28NADPH dehydrogenase OS=Bacillus licheniformis (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_B-6_T7 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC60_D08_058, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998068 ID=CV998068; Name=CV998068; organism=Citrus sinensis; type=EST; length=1034bp
TTTTTTGATGTGAACATAGGCATAGCCTTGGCCTTACGCCATTACAATTT
TACTGAGATAAACTATACTGGCTTTTACATTCACACGCTACATCAATAAA
AATTCAGAAAACAAGATTAAATCTGAGAGAATGCTTTATCAATCTAATGC
TTTTTCTTGGTAACATAAGAAGAGGTGTCGAGAAAGGGATAATCCGTGTA
ACCAACAACAGGATCGGAAACATAGAATGTTTCTCTGTTGTACTTATTGA
GGGGGCCATTGAACTCAAATCTCCTGGGTAAATCTGGATTAGCCAAGAAC
AAGCGACCATAAACAACAAGATCTGCACGGCCTTCAGCAATAGCTTTGTT
TCCATCTTCCCTGTCATAACCCCCAGCGACAAGAAAAGTACCCTTGAAAG
CCTTTCTCATGGGCAGCAAACTGTGAGGACATTCAGATTTTTCTCCAACT
GTTTTCATCCTCGGCTCAACCATGTGACAATAGAGGATACCGTATTTGTT
CAAGGATTCTGCCATGTAAAGACCTAAAGCTTCTGGGTTAGAGTCCCCTG
ATTCCATATAGTTTGCAAACGGAGATAGTCTTATCCCAACCCTATCTGCC
CCTATTTCATTGGAAACAGCTTCAACTATTTCTAAAGCAAAACGGCAACG
GTTCTCTAAGGATCCTCCATACTGGTCTGTTCGATCATTCACTTGATCCT
TCATAAATTGGTCAATTAGGAAGCCATGTGCACCGTGGAGCTCAATGCCA
TCGAAACCAGCCTCAATTGCATTTCTTGCAGCAAGCCTGAAATCATTCAC
AATTTGAGGGATTTCATCTGTCGTTAGCCGCCTTGGAGGAGTGAATTGTG
CAATATCAACACCATTAGTGCGGATTTGAGGTGTCAATGGCTTGTCTGTA
CAGGAAATTGGAGCTTGACCATTTGGCTGAATATCTTGATTTGAAACCCT
GCCAACGTGCCCAATCTGACAAAAGAAGATCCCACCTTTGGCATGAACAG
CATCTACAATCGGTTTCCATGCTTCAACTTGCTC
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