CV998067

Overview
NameCV998067
Unique NameCV998067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP27A_RAT (Sterol 26-hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.091e-17
Identity = 53/182 (29.12%), Postives = 91/182 (50.00%), Query Frame = 3
Query:  189 EYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERF-------EKGECEAHKLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFE 713
            E  + Q   G    ++LAG DT++ T+ WA+ +L  NPE+ E    E+   V    +    D + +  L++VI E+LRLYP  P      +  +  + G+  P+    ++  + + RDP ++ +P++F+P R+         G       +PFG G R+C G  +A+  + L L  LIQ +E
Sbjct:  320 ELLSPQETVGTFPELILAGVDTTSNTLTWALYHLSKNPEIQEALHKEVTGVVPFGKVPQNKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPESFQPHRWLRKREDDNSGIQHPFGSVPFGYGVRSCLGRRIAELEMQLLLSRLIQKYE 501          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP6W1_DROME (Probable cytochrome P450 6w1 OS=Drosophila melanogaster GN=Cyp6w1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17
Identity = 66/230 (28.70%), Postives = 111/230 (48.26%), Query Frame = 3
Query:   54 RILRFSRTTDAFLQGLIDEH-RTKKPGSESTNTMIDHMLALQE---SQPEYYTDQIIKGLIL----VMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSS----DDCTVGGYH---VPRGAILLVNAWAIHRDPKLWNDPDNFRPERF---EKGECEAHKLMPFGLGRRACPGS--GLAQRVVGL 683
            R+  FSR T  F++  ++   + ++   E  N +ID +LAL+    + P   + ++    ++    V   AG +TSA T+   +  L  N  + ++ R E+    G E  I    + ++ YL  V++E+LR YP    +    S     +  T+  +H   +P G  + ++  A+HRDP+ W DP+ + PERF    +        MPFG+G R C G   GL Q  +GL
Sbjct:  235 RVKLFSRETTKFIRSSVNYVLKERERTGEKRNDLIDILLALKREAAANPGKMSKEVDLDYLVAQAAVFQTAGFETSASTMTMTLYELAKNEALQDRLRQEIVDFFGDEDHISYERIQEMPYLSQVVNETLRKYPIVGYIERECSQPAEGERFTLEPFHNMELPHGMSIYMSTVAVHRDPQYWPDPEKYDPERFNSSNRDNLNMDAYMPFGVGPRNCIGMRLGLLQSKLGL 464          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP2CU_RABIT (Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=CYP2C30 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17
Identity = 63/239 (26.36%), Postives = 112/239 (46.86%), Query Frame = 3
Query:   15 PILKWIDVGDHKKRILRFSRTTDAFLQGLIDEHRTKKPGSESTNTMIDHMLALQESQPEYYTDQIIKGLILVMLL----AGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERFEKGECEAHK---LMPFGLGRRACPGSGLAQRVVGLTLGSLIQCF 710
            PIL ++    H+  + +       F    I EH+ +     +    ID++L   E +      Q     +LV +     AG+ T++ T+++ +  L+ +PE+  K + E++  +G++      D S + Y  +VI E  R     P  VPH  + D    GY +P+G  +L +  ++  D K + +P+ F P  F        K    +PF +G+RAC G GLA+  + L L +++Q F
Sbjct:  220 PILHYLPGSHHE--LFKVFNDQMKFFSEKIREHQ-ESLDHNNPRDFIDYLLIKMEKEKHNKQSQFTMHHLLVTIWDVFDAGSQTTSSTMQFGLLLLMKHPEIAAKVQEEIERVIGRDRSPCMQDRSCMPYTDAVIHEIQRYIDMVPNNVPHAVTQDIQFRGYLIPKGTHILPSLTSVLYDEKEFPNPEKFDPGHFLDASGNFKKSDYFLPFSIGKRACAGEGLARMELFLVLTTILQHF 455          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP2B5_RABIT (Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CYP2B5 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17
Identity = 62/245 (25.31%), Postives = 120/245 (48.98%), Query Frame = 3
Query:   39 GDHKKRILRFSRTTDAFLQGLIDEHRTKKPGSESTNTMIDHMLALQESQPEYYTDQIIKGLILVML---LAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGA-ILLVNAWAIHRDPKLWNDPDNFRPERFEKGECEAHK---LMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWLR-IDEDKVDMT 749
            G H++ I R  +  + F+   +++HR     S   + +  ++L +++ + +  ++   + LIL +L    AGT+T++ T+ +    ++  P V E+ + E++  +G        D +K+ Y  +VI E  RL    P   PH  + D    GY +P+   +  V + A+H DP+ +  P+ F P  F   +    +    MPF LG+R C G G+A+  + L   +++Q F     +  + +D+T
Sbjct:  229 GTHRQ-IYRNLQEINTFIGQTVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHRNLILTVLTLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLVPFGAPHMVTKDTQFRGYVIPKNTEVFPVLSSALH-DPRYFETPNTFNPGHFLDADGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 471          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP2B4_RABIT (Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CYP2B4 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17
Identity = 64/245 (26.12%), Postives = 123/245 (50.20%), Query Frame = 3
Query:   39 GDHKKRILRFSRTTDAFLQGLIDEHRTKKPGSESTNTMIDHMLALQESQPEYYTDQIIKGLILVML---LAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGA-ILLVNAWAIHRDPKLWNDPDNFRPERF--EKGECEAHK-LMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWLR-IDEDKVDMT 749
            G H++ I R  +  + F+   +++HR     S   + +  ++L +++ + +  ++   + LIL +L    AGT+T++ T+ +    ++  P V E+ + E++  +G        D +K+ Y  +VI E  RL    P  VPH  + D    GY +P+   +  V + A+H DP+ +  P+ F P  F    G  + ++  MPF LG+R C G G+A+  + L   +++Q F     +  + +D+T
Sbjct:  229 GTHRQ-IYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 471          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP2A9_MESAU (Cytochrome P450 2A9 OS=Mesocricetus auratus GN=CYP2A9 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17
Identity = 56/227 (24.67%), Postives = 116/227 (51.10%), Query Frame = 3
Query:   48 KKRILRFSRTTDAFLQGLIDEHRTKKPGSESTNTMIDHMLALQESQPEYYTDQIIKGLILVML---LAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERFEKGECEAHKL---MPFGLGRRACPGSGLAQRVVGLTLGSLIQCF 710
            +++I++ ++  + F+   + ++++    + + N +   ++ + E +    ++  IK L++  L    AG++T + TI +    L+  PEV  K   E+D  +G+       D  K+ Y ++VI+E  R    APL +P ++  + T  G+ +P+   +     ++  DPK +  P +F P+ F     +  K+   +PF +G+R C G GLA+  + L L +++Q F
Sbjct:  233 QQQIIKNTKELEDFMIRKVKQNQSTLDLNSARNFIDSFLIHMHEEKKNPTSEFNIKNLVMTSLNLFFAGSETVSSTIRYGFLLLMKYPEVEAKVHEEIDRVIGRNRQPQFEDRMKMPYTEAVINEIQRFANLAPLGIPRKTIKNTTFRGFFLPKDTDVYPILGSLLTDPKFFTSPKHFNPQNFLDDRGQLKKIAAFVPFSVGKRFCLGDGLARMELFLFLTTILQNF 459          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: C6A13_DROME (Probable cytochrome P450 6a13 OS=Drosophila melanogaster GN=Cyp6a13 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17
Identity = 60/213 (28.17%), Postives = 109/213 (51.17%), Query Frame = 3
Query:  144 NTMIDHMLAL-QESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQE-YLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPR-------GAILLVNAWAIHRDPKLWNDPDNFRPERFEKGECEAH---KLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWLRIDEDKVDM 746
            N +I  ++ L +E   +  + + I    LV  LAG DTS+ T+ + +  L  NP+V E+ R E+ + + +    +    + ++ YL  V++E+LR YP  P L+   + +      Y +P        G+ +++   +IH DP+L+ DP+ F P RFE  E +A      +PFG G R C G    +  V + L  L++ F++ R ++ ++ +
Sbjct:  262 NDLIQLLMELGEEGVKDALSFEQIAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLKRNNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKE------YQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRFEPEEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLRDFKFSRSEKTQIPL 468          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP4D8_DROME (Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.273e-17
Identity = 58/205 (28.29%), Postives = 103/205 (50.24%), Query Frame = 3
Query:  129 GSESTNTMIDHML-ALQESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYL--IDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYH----VPRGAILLVNAWAIHRDPKLWNDPDNFRPERFEKGECEA-HKLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWL 719
            GS+    ++D +L +  + +P   T+  I+  +   +  G DT+   + + +  L  +PEV  K   E+   +G +    +   DL +L Y++ VI ESLR+YP  P++     +D       H    +P G+ +++  + +HR P+ + +PD F PER E G   A  K++PF  G R C G   AQ  + + L  +++ +E L
Sbjct:  231 GSKRRMALLDVLLMSTVDGRP--LTNDEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERHENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELL 433          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP4C1_BLADI (Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP4C1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.273e-17
Identity = 66/214 (30.84%), Postives = 108/214 (50.47%), Query Frame = 3
Query:  129 GSESTNTMIDHMLALQESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKV-GQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHR------DPKLWNDPDNFRPERFEKGECEAHKLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWLRIDEDKVDMT 749
            G +     +D +L   E+  +  +D  I+  +   +  G DT++  I WA+  L ++PE+ +K   ELD    G +      DL+ + YL+ VI ESLRL+P+ P  +     +D  +G Y VP G ++ +  + +HR      +P+ +N PDNF PER  K    A+  +PF  G R C G   A       L S+++ F+ +R  E + D+T
Sbjct:  278 GKKKRLAFLDLLLEASENGTKM-SDTDIREEVDTFMFEGHDTTSAGICWALFLLGSHPEIQDKVYEELDHIFQGSDRSTTMRDLADMKYLERVIKESLRLFPSVPF-IGRVLKEDTKIGDYLVPAGCMMNLQIYHVHRNQDQYPNPEAFN-PDNFLPERVAKRHPYAY--VPFSAGPRNCIGQKFATLEEKTVLSSILRNFK-VRSIEKREDLT 485          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.273e-17
Identity = 55/208 (26.44%), Postives = 94/208 (45.19%), Query Frame = 3
Query:   99 LIDEHRTKKPGSESTNTMIDHMLALQESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERF-EKGECEAHKLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWL 719
            L DE   +K   +     +D +L  +       +D+ ++  +   +  G DT+A  I W    L  NPE  +  R E+ S +G    I   DL K+ Y    I E+LR+YP    +    S+      G  +P+G  ++++ + +H +P +W +P+ F P RF  +    +H  +PF  G R C G   A   + + +   +  FE L
Sbjct:  272 LQDEEELQKVKQKRRLDFLDILLFARIENGSSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFAPESSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELL 479          
The following BLAST results are available for this feature:
BLAST of CV998067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP27A_RAT3.091e-1729.12Sterol 26-hydroxylase, mitochondrial OS=Rattus nor... [more]
CP6W1_DROME4.037e-1728.70Probable cytochrome P450 6w1 OS=Drosophila melanog... [more]
CP2CU_RABIT4.037e-1726.36Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=C... [more]
CP2B5_RABIT4.037e-1725.31Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CY... [more]
CP2B4_RABIT4.037e-1726.12Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CY... [more]
CP2A9_MESAU4.037e-1724.67Cytochrome P450 2A9 OS=Mesocricetus auratus GN=CYP... [more]
C6A13_DROME4.037e-1728.17Probable cytochrome P450 6a13 OS=Drosophila melano... [more]
CP4D8_DROME5.273e-1728.29Cytochrome P450 4d8 OS=Drosophila melanogaster GN=... [more]
CP4C1_BLADI5.273e-1730.84Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP... [more]
CP4AC_RAT5.273e-1726.44Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_B-6_T3 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC30_F04_022, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998067 ID=CV998067; Name=CV998067; organism=Citrus sinensis; type=EST; length=894bp
CAGAAGATTTCTTGCCGATCTTGAAGTGGATCGACGTTGGTGATCATAAG
AAGAGGATTTTGAGGTTTAGTAGAACTACTGATGCGTTTTTGCAAGGCTT
GATTGATGAGCACAGAACTAAGAAGCCAGGTTCTGAGAGCACCAATACCA
TGATTGATCATATGCTGGCTTTGCAAGAGTCTCAGCCTGAATACTACACT
GATCAAATCATCAAAGGCCTTATACTGGTGATGCTGCTAGCTGGGACCGA
CACATCAGCAGTGACAATAGAATGGGCGATGTCCAATTTGGTCAATAATC
CAGAGGTACTAGAAAAAGCCAGAGCGGAACTAGACAGTAAAGTTGGCCAA
GAGTACTTGATCGACGAGCCTGATCTTTCCAAACTACATTATCTTCAGAG
TGTTATATCAGAGAGCCTTCGACTGTATCCAACAGCGCCACTTCTAGTAC
CTCACCAATCATCCGACGACTGCACTGTAGGAGGATACCATGTTCCACGT
GGCGCAATCTTATTGGTAAATGCGTGGGCTATTCACAGGGACCCTAAGTT
GTGGAATGATCCAGACAATTTTAGACCAGAAAGGTTCGAGAAGGGAGAAT
GTGAGGCCCACAAGCTAATGCCATTCGGGTTAGGAAGGCGAGCGTGTCCT
GGATCGGGTTTGGCCCAACGTGTCGTGGGCTTAACTTTGGGCTCGTTGAT
TCAATGTTTCGAGTGGCTGAGAATTGATGAAGACAAGGTTGATATGACCG
AAGGGAGAGGAATCACCATGCCTAAAGCCGAGCCATTAGAGGTTATGTGC
AGAGCTCGCCCCATCGTGAACAATGTTTCGGAACTCTTTGACTAAATCAG
AGTGGTTATTTCTTTTATTTCTCTTTTGGCAATGTTGTGCTCAT
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