CV998067

Overview
NameCV998067
Unique NameCV998067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP255_MOUSE (Cytochrome P450 2C55 OS=Mus musculus GN=Cyp2c55 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.273e-17
Identity = 62/245 (25.31%), Postives = 119/245 (48.57%), Query Frame = 3
Query:   39 GDHKKRILRFSRTTDAFLQGLIDEHRTKKPGSESTNTMIDHMLALQESQPEY----YTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERF--EKGEC-EAHKLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWLR-IDEDKVDMT 749
            G H K I  F+    +++ G + EH+ +    ++    ID  L   E +       +T + +   +  + +AGT+T+ +T+ + +  L+ + EV  K +AE+D  +G+       D +++ Y  +++ E  R     P  VPH ++ +     Y +P+G  L+ +  ++  D K + +P+ F P  F  E G   ++   MPF +G+R C G  LA+  + L L +++Q F     +D   +D T
Sbjct:  228 GSHNKVIKNFTEIK-SYILGRVKEHQ-ETLDMDNPRDFIDCFLIKMEQEKHNPHSEFTIESLMATVTDIFVAGTETTNITLRYGLLLLLKHTEVTAKVQAEIDHVIGRHRSPCMQDRTRMPYTDAMVHEIQRYIDLIPNNVPHAATCNVRFRSYFIPKGTELVTSLTSVLHDDKEFPNPEVFDPGHFLDENGNFKKSDYFMPFSIGKRMCVGEALARTELFLILTTILQNFNLKSLVDTKDIDTT 470          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.887e-17
Identity = 51/188 (27.13%), Postives = 87/188 (46.28%), Query Frame = 3
Query:  153 IDHMLALQESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERFEKGEC-EAHKLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFE 713
            +D +L  +  +    +D  ++  +   +  G DT+A  I W +  L ++PE  ++ R E+   +G    I    L ++ Y    I E+LRLYP  P +    S       G  +P G  L ++ + +H +P++W +P+ F P RF  G    +H  MPF  G R C G   A   + + +   +  FE
Sbjct:  286 LDILLLARMEKGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWPNPEEFDPSRFAPGSARHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFE 473          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP392_DROME (Probable cytochrome P450 309a2 OS=Drosophila melanogaster GN=Cyp309a2 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.887e-17
Identity = 67/234 (28.63%), Postives = 105/234 (44.87%), Query Frame = 3
Query:   66 FSRTTDAFLQGLIDE--HRTKKPGSESTNTMIDHMLALQESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTV---------GGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERFEKGECEAHK----LMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWLR 722
            + + TD F   L  E      K G  +    + H+L L++ +   + D +  G  L ++L G DTS   +  A+  L  NP V +K R E+ S +  E  +D   LS L YL+ VI ESLRL    P     Q +  CT+             V  G  +++  +  H D + + +P+ F+PERF+ G  +        +PF  G R C G  LA   +   L  ++  F+ +R
Sbjct:  282 YPKETDEFFSNLTKESIELRLKAGDSTRTDYLSHLLQLRDQKQATHDDLV--GHALTVMLDGYDTSGTALLHALYYLAENPAVQQKLRVEILSCMASEKSLDFEKLSSLQYLEQVIYESLRLSSLIP-----QYTKVCTLPTVIRLSESKSLDVEVGMTIMIPNYQFHHDKQYFPEPEAFKPERFDNGAYQELMRKGIFLPFSDGPRICMGVPLAMLTLKSALVHILSNFQVVR 508          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP242_PIG (Cytochrome P450 2C42 (Fragment) OS=Sus scrofa GN=CYP2C42 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.887e-17
Identity = 56/196 (28.57%), Postives = 97/196 (49.49%), Query Frame = 3
Query:  174 QESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERF--EKGEC-EAHKLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWLR-IDEDKVDMT 749
            + +Q   YT + +   +  M  AGT+T++ T+ + +  L+ +PEV  K + E+D  +G+       D S + Y  +V+ E  R     P  +PH  + D     Y +P+G  +L +  ++  D K + +P+ F P  F  E G   ++   MPF  G+R C G GLA+  + L L +++Q F     +D   +D T
Sbjct:  112 KHNQQSEYTIENLIATVSDMFSAGTETTSTTMRYGLLLLLKHPEVTAKVQEEIDRVIGRHRSACMQDRSHMPYTDAVVHEIQRYIDLVPTNLPHAVTCDIKFRNYLIPKGTTILTSLTSVLYDCKAFPNPEVFDPGHFLDESGNFKKSDYFMPFSTGKRICVGEGLARMELFLFLTTILQKFNLKSVVDPKDIDTT 307          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP6B1_PAPPO (Cytochrome P450 6B1 OS=Papilio polyxenes GN=CYP6B1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 62/214 (28.97%), Postives = 101/214 (47.20%), Query Frame = 3
Query:   51 KRILRFSRTTDAFLQGLID---EHRTKKPGSESTNTMIDHMLALQESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQ-EYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVG-GYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERFEKGECEAH---KLMPFGLGRRACPGSGLAQ 668
            K +L   + T ++ + +ID   E R KK    S     + + AL+       TD +I   + +  +AG +TSA T+ +    L  NP++ +K  AE+D  + + +  I    LS++ YL  V  E+LR YP A     +  +D    G    + +G  ++V+ W I  DPK + +P+ F PERF     +       +PF  G R C G   A+
Sbjct:  243 KNVLEMRKGTPSYQKDMIDLIQELREKKTLELSRKHENEDVKALE------LTDGVISAQMFIFYMAGYETSATTMTYLFYELAKNPDIQDKLIAEIDEVLSRHDGNITYECLSEMTYLSKVFDETLRKYPVADFTQRNAKTDYVFPGTDITIKKGQTIIVSTWGIQNDPKYYPNPEKFDPERFNPENVKDRHPCAYLPFSAGPRNCLGMRFAK 450          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 52/184 (28.26%), Postives = 88/184 (47.83%), Query Frame = 3
Query:  153 IDHMLALQESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERF-EKGECEAHKLMPFGLGRRACPGSGLAQR----VVGLTL 689
            +D +L  +    +  +D+ ++  +   +  G DT+A  + W    L  +PE  ++ R E+ S +G    I    L ++ Y    I E+LRLYP  P +V   S+      G  +P+G  + ++ + +H +PK+W +P+ F P RF       +H  +PF  G R C G   A      +V LTL
Sbjct:  291 LDILLLARMENGDSLSDKDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQQRCREEVQSVLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFAPDSPRHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTL 474          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP2F1_HUMAN (Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 70/276 (25.36%), Postives = 117/276 (42.39%), Query Frame = 3
Query:    9 FLPILKWIDVGDHKKRILRFSRTTDAFLQGLIDEHRTKKPGS--ESTNTMIDHMLALQESQPEYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERFEKGECEAHK---LMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEWLRI----DEDKVDMTEGRGITMPKAEPLEVMCRAR 809
            F  +L W+  G H++    F    D     + D   +  P S  +     +  M   +E    ++    +      +L  GT T + T+  A   L+  P+V  + + E+D  VG+  L    D + + Y  +VI E  R     P+ +PH+ + D    G+ +P+G  ++     +H DP  +  P  F PE F        K    MPF  GRR C G  LA+  + L L +++Q F    +    D D   ++ G G  +P+  P ++  R R
Sbjct:  220 FPSLLDWVP-GPHQRIFQNFKCLRDLIAHSVHDHQASLDPRSPRDFIQCFLTKMAEEKEDPLSHFHMDTLLMTTHNLLFGGTKTVSTTLHHAFLALMKYPKVQARVQEEIDLVVGRARLPALKDRAAMPYTDAVIHEVQRFADIIPMNLPHRVTRDTAFRGFLIPKGTDVITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFKKSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSFSLQPLGAPEDIDLTPLSSGLG-NLPR--PFQLCLRPR 491          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP2AA_RABIT (Cytochrome P450 2A10 OS=Oryctolagus cuniculus GN=CYP2A10 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 62/222 (27.93%), Postives = 111/222 (50.00%), Query Frame = 3
Query:   90 LQGLID------EHRTKKPGSESTNTMIDHMLA-LQESQPEYYTDQIIKGLILVML---LAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERF--EKGEC-EAHKLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEW 716
            L+GL D      E   +     S    ID  L  +QE + +  ++  +K L++  L    AGT+T + T+ +    L+ +P+V  K   E+D  +G+       D +K+ Y ++VI E  R     P+ + H+ + D     + +P+GA +     ++ +DPK ++ P  F P+ F  EKG+  ++   MPF +G+R C G GLA+  + L   +++Q F +
Sbjct:  241 LEGLRDFIAKKVERNQRTLDPNSPRDFIDSFLIRMQEEKKDPKSEFHMKNLVMTTLNLFFAGTETVSTTMRYGFLLLMKHPDVEAKVHEEIDRVIGRNRQPKFEDRAKMPYTEAVIHEIQRFTDMIPMGLAHRVTRDTKFRDFLLPKGAEVFPMLGSVLKDPKFFSKPREFYPQHFLDEKGQFKKSDAFMPFSVGKRYCLGEGLARMELFLFFTTIMQNFRF 462          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP2A5_MOUSE (Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 61/222 (27.48%), Postives = 110/222 (49.55%), Query Frame = 3
Query:   90 LQGLID------EHRTKKPGSESTNTMIDHMLA-LQESQPEYYTDQIIKGLILVML---LAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERF--EKGECEAH-KLMPFGLGRRACPGSGLAQRVVGLTLGSLIQCFEW 716
            LQGL D      EH  +     S    ID  L  + E +    T+  +K L+L  L    AGT+T + T+ +    L+ +P++  K   E+D  +G+       D  K+ Y ++VI E  R     P+ +  + + D     + +P+G  +     ++ +DPK +++P +F P+ F  +KG+ + +   +PF +G+R C G GLA+  + L L +++Q F +
Sbjct:  241 LQGLEDFITKKVEHNQRTLDPNSPRDFIDSFLIRMLEEKKNPNTEFYMKNLVLTTLNLFFAGTETVSTTLRYGFLLLMKHPDIEAKVHEEIDRVIGRNRQPKYEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKNDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNFHF 462          
BLAST of CV998067 vs. ExPASy Swiss-Prot
Match: CP27A_MOUSE (Sterol 26-hydroxylase, mitochondrial OS=Mus musculus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 53/182 (29.12%), Postives = 94/182 (51.65%), Query Frame = 3
Query:  189 EYYTDQIIKGLILVMLLAGTDTSAVTIEWAMSNLVNNPEVLEKARAELDSKVGQEYLIDEPDLSKLHYLQSVISESLRLYPTAPLLVPHQSSDDCTVGGYHVPRGAILLVNAWAIHRDPKLWNDPDNFRPERF-EKGECEAHKLM------PFGLGRRACPGSGLAQRVVGLTLGSLIQCFE 713
            E  + Q   G    +LLAG DT++ T+ WA+ +L  +PE+ E    E+   V    +    D + +  L++VI E+LRLYP  P      +  +  + G+  P+    ++  + + RDP ++ +P++F+P R+  K E +   ++      PFG G R+C G  +A+  + L L  L+Q +E
Sbjct:  320 ELLSTQETIGTFPELLLAGVDTTSNTLTWALYHLSKSPEIQEALHKEVTGVVPFGKVPQHKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPNSFQPHRWLRKKEADNPGILHPFGSVPFGYGVRSCLGRRIAELEMQLMLSRLVQKYE 501          
The following BLAST results are available for this feature:
BLAST of CV998067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP255_MOUSE5.273e-1725.31Cytochrome P450 2C55 OS=Mus musculus GN=Cyp2c55 PE... [more]
CP4AO_PIG6.887e-1727.13Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP392_DROME6.887e-1728.63Probable cytochrome P450 309a2 OS=Drosophila melan... [more]
CP242_PIG6.887e-1728.57Cytochrome P450 2C42 (Fragment) OS=Sus scrofa GN=C... [more]
CP6B1_PAPPO8.995e-1728.97Cytochrome P450 6B1 OS=Papilio polyxenes GN=CYP6B1... [more]
CP4AA_RAT8.995e-1728.26Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP2F1_HUMAN8.995e-1725.36Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1... [more]
CP2AA_RABIT8.995e-1727.93Cytochrome P450 2A10 OS=Oryctolagus cuniculus GN=C... [more]
CP2A5_MOUSE8.995e-1727.48Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2... [more]
CP27A_MOUSE8.995e-1729.12Sterol 26-hydroxylase, mitochondrial OS=Mus muscul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_B-6_T3 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC30_F04_022, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998067 ID=CV998067; Name=CV998067; organism=Citrus sinensis; type=EST; length=894bp
CAGAAGATTTCTTGCCGATCTTGAAGTGGATCGACGTTGGTGATCATAAG
AAGAGGATTTTGAGGTTTAGTAGAACTACTGATGCGTTTTTGCAAGGCTT
GATTGATGAGCACAGAACTAAGAAGCCAGGTTCTGAGAGCACCAATACCA
TGATTGATCATATGCTGGCTTTGCAAGAGTCTCAGCCTGAATACTACACT
GATCAAATCATCAAAGGCCTTATACTGGTGATGCTGCTAGCTGGGACCGA
CACATCAGCAGTGACAATAGAATGGGCGATGTCCAATTTGGTCAATAATC
CAGAGGTACTAGAAAAAGCCAGAGCGGAACTAGACAGTAAAGTTGGCCAA
GAGTACTTGATCGACGAGCCTGATCTTTCCAAACTACATTATCTTCAGAG
TGTTATATCAGAGAGCCTTCGACTGTATCCAACAGCGCCACTTCTAGTAC
CTCACCAATCATCCGACGACTGCACTGTAGGAGGATACCATGTTCCACGT
GGCGCAATCTTATTGGTAAATGCGTGGGCTATTCACAGGGACCCTAAGTT
GTGGAATGATCCAGACAATTTTAGACCAGAAAGGTTCGAGAAGGGAGAAT
GTGAGGCCCACAAGCTAATGCCATTCGGGTTAGGAAGGCGAGCGTGTCCT
GGATCGGGTTTGGCCCAACGTGTCGTGGGCTTAACTTTGGGCTCGTTGAT
TCAATGTTTCGAGTGGCTGAGAATTGATGAAGACAAGGTTGATATGACCG
AAGGGAGAGGAATCACCATGCCTAAAGCCGAGCCATTAGAGGTTATGTGC
AGAGCTCGCCCCATCGTGAACAATGTTTCGGAACTCTTTGACTAAATCAG
AGTGGTTATTTCTTTTATTTCTCTTTTGGCAATGTTGTGCTCAT
back to top