CV998064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.771e-23 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 43 CHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 267 CH V+ +W P+ ND A R+PGYG+ TNIINGG+ECG G +S VA+RIGF+ +C G+ G NLDCYNQ P+ Sbjct: 247 CHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321 HSP 2 Score: 29.261 bits (64), Expect = 1.771e-23 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 6 WFWMTAQPPKPS 41 WFWMT Q PKPS Sbjct: 235 WFWMTPQSPKPS 246
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.457e-23 Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 1 Query: 43 CHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 294 CH+VII W+PS+ D A+RLPG+G+ TNIINGG+ECG+G +S V +RIGF+ +C G+ PGDNLDC NQ +G L+ +M Sbjct: 241 CHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.016e-23 Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYG 270 H+VII W PSA D A+R+PGYG+ TNIINGGIECG G N V +RIG++ +CG + PG+NLDCYNQ +G Sbjct: 177 HDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251 HSP 2 Score: 27.335 bits (59), Expect = 3.016e-23 Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 IWFWMT Q KPS Sbjct: 163 IWFWMTPQDNKPS 175
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.918e-23 Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 267 H VI +W PS D A R+PG+G+ TNIINGGIECG G +S VA+RIGF+ +C G+ G+NLDCY+Q P+ Sbjct: 192 HAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265 HSP 2 Score: 35.8094 bits (81), Expect = 3.918e-23 Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 IWFWMTAQPPKPS Sbjct: 178 IWFWMTAQPPKPS 190
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.117e-22 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 267 H+VI W PS D A R PGYG+ TNI+NGG+ECG G + VANRIGF+ +CG FGI G NLDCYNQ P+ Sbjct: 256 HDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329 HSP 2 Score: 26.1794 bits (56), Expect = 1.117e-22 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 +WFWMT Q KPS Sbjct: 242 LWFWMTPQGNKPS 254
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.461e-22 Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 267 H VI +W PS D A R PG+G+ TNIINGG+ECG G +S VA+RIGF+ +C G+ GDNLDCYNQ P+ Sbjct: 192 HAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265 HSP 2 Score: 31.9574 bits (71), Expect = 1.461e-22 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 +WFWMTAQ PKPS Sbjct: 178 LWFWMTAQAPKPS 190
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.477e-22 Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 43 CHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 258 CH+VI W PSA D +A+R+PGYG+ TNIINGGIECGKG N+ V +RIG++ + PGDNLDCYNQ Sbjct: 177 CHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQ 248 HSP 2 Score: 26.9498 bits (58), Expect = 2.477e-22 Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 IWFWMT Q KPS Sbjct: 164 IWFWMTPQGNKPS 176
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.478e-22 Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 258 H+VII W PSA D +A+R PG G+ TNIINGGIECG G N+ V +RIG++ +CG + PGDNLDCYNQ Sbjct: 177 HDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQ 247 HSP 2 Score: 27.335 bits (59), Expect = 2.478e-22 Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 IWFWMT Q KPS Sbjct: 163 IWFWMTPQDNKPS 175
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.226e-22 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYG 270 H+VI W PS D R+PG+G+ TNIINGG+EC G N+ + NRIGF+ +C G+ PG+NLDC NQ P+G Sbjct: 172 HDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246 HSP 2 Score: 31.9574 bits (71), Expect = 3.226e-22 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 +WFWMTAQ PKPS Sbjct: 158 LWFWMTAQQPKPS 170
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 93.5893 bits (231), Expect = 5.427e-22 Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 267 H VI +W PS D A R+PG+G+ TNI+NGGIECG G +S VA+RIGF+ +C G+ G+NLDCY+Q P+ Sbjct: 244 HAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317 HSP 2 Score: 31.5722 bits (70), Expect = 5.427e-22 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 +WFWMTAQ PKPS Sbjct: 230 MWFWMTAQAPKPS 242 The following BLAST results are available for this feature:
BLAST of CV998064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CV998064 ID=CV998064; Name=CV998064; organism=Citrus sinensis; type=EST; length=476bpback to top |