CV998064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.882e-18 Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 1 Query: 43 CHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCG 213 CH+VII W+PSA D A+RLPG+G+ TNIINGG+ECG+G +S V +RIGF+ +CG Sbjct: 245 CHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301 HSP 2 Score: 30.8018 bits (68), Expect = 1.882e-18 Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 IWFWMT Q PKPS Sbjct: 232 IWFWMTPQSPKPS 244
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.385e-18 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 43 CHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 267 CH+V++ E++P DV A+R G+GL TNI+NGG+EC + ++ V NRIGF+ +C G+ G NLDC +Q P+ Sbjct: 216 CHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290 HSP 2 Score: 25.409 bits (54), Expect = 5.385e-18 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 3 IWFWMTAQPPKPS 41 +WFWMT + KPS Sbjct: 203 LWFWMTPRDTKPS 215
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.906e-15 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQS 291 H V+ +W P+ D A R PGYGLTTNI+ GG++C G A+R+ F+ +C G+ G NLDC+ Q P+ ++M+ S Sbjct: 258 HAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337 HSP 2 Score: 23.483 bits (49), Expect = 2.906e-15 Identity = 7/17 (41.18%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 3 IWFWMTAQPPKPSLPRS 53 +W WMTA+ P P + Sbjct: 243 LWLWMTARSPSQPSPHA 259
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.776e-15 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 46 HEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQS 291 H V+ +W P+ D A R PGYGLTTNI+ GG++C G A+R+ F+ +C G+ G NLDC+ Q P+ +M+ S Sbjct: 258 HAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337 HSP 2 Score: 23.483 bits (49), Expect = 3.776e-15 Identity = 7/17 (41.18%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 3 IWFWMTAQPPKPSLPRS 53 +W WMTA+ P P + Sbjct: 243 LWLWMTARSPSQPSPHA 259
BLAST of CV998064 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.486e-15 Identity = 36/78 (46.15%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 43 CHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPN 276 CHEVI EW PS D+ A R PG+G+ TNII G EC K + NRI ++ +C + PGDNL C NQ + N Sbjct: 230 CHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETFEDN 307 The following BLAST results are available for this feature:
BLAST of CV998064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV998064 ID=CV998064; Name=CV998064; organism=Citrus sinensis; type=EST; length=476bpback to top |