CX674868

Overview
NameCX674868
Unique NameCX674868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674868 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.273e-17
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  309 TWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 572
            +WCV      +  LQA +DYACG G ADC P +   +C++P+ + +H +YA NS++QK+ +  GSC+F G A      P Y  C FPT
Sbjct:   20 SWCVCKTGLSDTVLQATLDYACGNG-ADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPT 106          
BLAST of CX674868 vs. ExPASy Swiss-Prot
Match: E13L3_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 3 OS=Arabidopsis thaliana GN=At5g08000 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.617e-16
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  309 TWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 572
            +WCV      +  LQ  +DYACG G ADC P     +C++P+ + AH +YA NS++QK+ + + SC+F G A + T  P Y  C FP+
Sbjct:   20 SWCVCKTGLSDSVLQKTLDYACGNG-ADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPS 106          
BLAST of CX674868 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 57/182 (31.32%), Postives = 87/182 (47.80%), Query Frame = -3
Query:  315 VRRVLSGSGTPLRPKDPLNVYLFALFNENQK--QGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVA--NANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 848
            + R  +  GTP+RP   ++ YLF L +E+ K  Q    ER++G+FY + Q  Y    +S    +   PA +                      + WC+   NAN  + +L  ++ YAC    ADC  +  G++C + N L  + SYAFNSYYQ   +   +C F G + V T+ P  G C+F
Sbjct:  291 MNRQKANKGTPMRP-GAMDAYLFGLIDEDAKSIQPGNFERHWGIFYIDGQPKYQ---LSLGSGNGLIPAKD-----------------VHYLAKKWCILAPNANLQDPQLGPSVSYACDH--ADCTSLGYGSSCGNLN-LAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRDPSVGSCKF 448          
BLAST of CX674868 vs. ExPASy Swiss-Prot
Match: E13L4_ARATH (Glucan endo-1,3-beta-glucosidase-like protein At1g69295 OS=Arabidopsis thaliana GN=At1g69295 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 37/69 (53.62%), Postives = 42/69 (60.87%), Query Frame = -3
Query:  336 EKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAP 542
            E+ LQ AIDYACG G ADC  IQ    CY PNT++ H   A NSYYQK+     +CDF GAA   T  P
Sbjct:   29 EQVLQKAIDYACGNG-ADCTQIQPTGACYQPNTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPP 96          
BLAST of CX674868 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 54/180 (30.00%), Postives = 85/180 (47.22%), Query Frame = -3
Query:  312 VLSGSGTPLRPKDPLNVYLFALFNENQK--QGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANA--GEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFP 839
            +  G GTP RP  P++ YLF+L +E+ K  Q    ER++G+F     T    P  + +  +++T A  ++K                   + WCV   N    + ++  A+ YAC  G  DC  +  G +C + +  + + SYAFNSYYQ Q +   +C F   + V    P  G C+FP
Sbjct:  289 ISGGKGTPRRP-GPIDAYLFSLIDEDAKSVQPGYFERHWGIF-----TFDGLPKYALNLGTTNTGALIQAK-------------GVRYLERKWCVMKPNVRLDDPQVAPAVSYACSLG--DCTSLGVGTSCANLDGKQ-NISYAFNSYYQIQDQLDTACKFPNISEVTKTDPSTGTCRFP 446          
BLAST of CX674868 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = -3
Query:  636 LVRRVLSG--SGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFV------------STSGNSSSTPAANKS 851
            L++ ++SG  + TPL+P + L++Y+FALFNEN K GPTSERNYGLF P+    Y   F             +  GNSSS    +KS
Sbjct:  292 LIKMMMSGKKTKTPLKPNNDLSIYVFALFNENLKPGPTSERNYGLFKPDGTQAYSLGFALNDVVRGASGGGTGGGNSSSGGGRDKS 377          
BLAST of CX674868 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = -3
Query:  636 TPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKS 821
            TP+RP+  L +++FALFNEN K GPTSERNYGLF P+   VY     ++S +SS + ++N +
Sbjct:  303 TPIRPECDLTIFVFALFNENMKPGPTSERNYGLFNPDGTPVYSLGIKTSSTHSSGSGSSNST 364          
The following BLAST results are available for this feature:
BLAST of CX674868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
E13L2_ARATH5.273e-1742.05Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]
E13L3_ARATH2.617e-1640.91Glucan endo-1,3-beta-glucosidase-like protein 3 OS... [more]
E135_ARATH6.446e-1531.32Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E13L4_ARATH2.074e-1353.62Glucan endo-1,3-beta-glucosidase-like protein At1g... [more]
E136_ARATH1.486e-1130.00Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E1311_ARATH9.632e-1144.19Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1310_ARATH9.632e-1150.00Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9B11-C21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674868 ID=CX674868; Name=CX674868; organism=Citrus sinensis; type=EST; length=895bp
TTTTAAACAACAAAAAAGATGCCGAATGACATTAACATAAAGTCTGCAAC
ATCATAATCTGATCTGTATCCACATAAAATAATGGACTAAATTCATGATC
ATTAGAATAAATACAATAAGGATTTGATCATATTGACACTAGAGTCAAAC
CAACTGATAACAACCCCACCCACTCAGCGTAAAATTTAAATACAAGGGAG
AAAAATTAATGTTCCAATCCTCTAAATCTATCAGAAAAAATCATCACCAA
TCGTAAGCCGCGACCACAAATCAGCTAATGCTCCCTATTTTTTTCCCACT
CAATAGCCAGTTGGGAACTGGCATTTTCCATATTTAGGAGCCTGCGTGAC
CACGTAGGCCGCACCACCAAAATCACAAGATCCAGCCTTACGCACTTGCT
TCTGATAATAACTATTGAAGGCATACGATGCATGGGCTTCTAACGTGTTA
GGATCGTAACACGTGGCGCCCTCTTGAATCGGTCGGCAATCAGCGCCTCC
CTCGCCGCAGGCATAATCAATTGCGGCTTGCAACTTTTTCTCACCAGCAT
TCGCGTTAGCCACGCACCAAGTCTGTCCCGCCGCCGAGGGCGACACGTCA
CCACCGCCTCCTCCGCTCACCGGAACTTGAGTCTTGCTCTTATTGGCTGC
CGGCGTTGAGCTTGAGTTCCCACTAGTTGACACAAACGGCGAGTCGTACA
CCGTCTGTTCGTTGGGATAAAACAACCCGTAATTCCTTTCCGATGTGGGA
CCCTGTTTTTGATTCTCATTGAACAAAGCGAAGAGGTAAACGTTAAGTGG
GTCCTTTGGTCTCAAGGGGGTCCCACTTCCAGACAAGACTCTACGTACTA
GATTCCCGTTGTACGCCGCGGCATTGGCCGCACCAGCACCCGCCT
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