CX674863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 5.692e-41 Identity = 80/191 (41.88%), Postives = 128/191 (67.02%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKS 741 YLFK+++IGDS VGKS LL R+A + + +TIGV+F+ +++E+DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL E+ ++ V ++LVGNKCDL + + V K A++ G+ F+ETSA ++TNV+ +F + EI + + K+ + + + +S Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQS 200
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 5.692e-41 Identity = 80/191 (41.88%), Postives = 128/191 (67.02%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKS 741 YLFK+++IGDS VGKS LL R+A + + +TIGV+F+ +++E+DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL E+ ++ V ++LVGNKCDL + + V K A++ G+ F+ETSA ++TNV+ +F + EI + + K+ + + + +S Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQS 200
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 5.692e-41 Identity = 80/191 (41.88%), Postives = 128/191 (67.02%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKS 741 YLFK+++IGDS VGKS LL R+A + + +TIGV+F+ +++E+DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL E+ ++ V ++LVGNKCDL + + V K A++ G+ F+ETSA ++TNV+ +F + EI + + K+ + + + +S Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQS 200
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 7.434e-41 Identity = 80/191 (41.88%), Postives = 128/191 (67.02%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKS 741 YLFK+++IGDS VGKS LL R+A + + +TIGV+F+ +++E+DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL E+ ++ V ++LVGNKCDL + + V K A++ G+ F+ETSA ++TNV+ +F + EI + + K+ + + + +S Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQS 200
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.163e-40 Identity = 79/168 (47.02%), Postives = 122/168 (72.62%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 672 YLFK+++IGDS VGKS LL R+A + + +TIGV+F+ +++E+DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL+E+ ++ V ++LVGNK DL S + V K+ A+ G+ F+ETSA ++TNV+ AF + EI + ++ Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA 174
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.825e-40 Identity = 77/175 (44.00%), Postives = 122/175 (69.71%), Query Frame = 1 Query: 172 LFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDS 696 LFK+++IGDS VGK+ +L R++ + FN +TIG++F+ +++E+ GK++K QIWDTAGQERF +T++YYRGA+G ++VYDIT +F++IS+WL + H++ V RML+GNKCD++ R V +G+ +A G+ F ETSA + N++ AF + +I K NS++ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.825e-40 Identity = 77/175 (44.00%), Postives = 122/175 (69.71%), Query Frame = 1 Query: 172 LFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDS 696 LFK+++IGDS VGK+ +L R++ + FN +TIG++F+ +++E+ GK++K QIWDTAGQERF +T++YYRGA+G ++VYDIT +F++IS+WL + H++ V RML+GNKCD++ R V +G+ +A G+ F ETSA + N++ AF + +I K NS++ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.825e-40 Identity = 77/175 (44.00%), Postives = 122/175 (69.71%), Query Frame = 1 Query: 172 LFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDS 696 LFK+++IGDS VGK+ +L R++ + FN +TIG++F+ +++E+ GK++K QIWDTAGQERF +T++YYRGA+G ++VYDIT +F++IS+WL + H++ V RML+GNKCD++ R V +G+ +A G+ F ETSA + N++ AF + +I K NS++ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.689e-40 Identity = 82/204 (40.20%), Postives = 132/204 (64.71%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISR-WLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAEL-SLNRVTLVKSETDGSKQTSSY 774 YLFKI++IGDS GKS+LL R+A N ++ +TIGV+F+ ++++ID +K QIWDTAGQERFR +TS YYRGA G + VYD+T + +FD I+ WL ++ ++ + V ++L+GNK DL R VS +E K +AE + ++E SA +NV+ AF + + + V++ N+ + L + ++V + TD +++S + Sbjct: 6 YLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPSNAPASTVSLNTASKVPTNRGLTDSCQESSVF 209
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.689e-40 Identity = 77/175 (44.00%), Postives = 121/175 (69.14%), Query Frame = 1 Query: 172 LFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDS 696 LFK+++IGDS VGK+ +L R++ + FN +TIG++ + +++E+ GK++K QIWDTAGQERF +T++YYRGA+G ++VYDIT +F++IS+WL + H++ V RML+GNKCD+E R V +G+ +A G+ F ETSA + N++ AF + +I K NS++ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183 The following BLAST results are available for this feature:
BLAST of CX674863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674863 ID=CX674863; Name=CX674863; organism=Citrus sinensis; type=EST; length=797bpback to top |