CX674863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 7.657e-54 Identity = 104/170 (61.18%), Postives = 134/170 (78.82%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRK 678 YLFKIVIIGDSAVGKSNLL+R+ RNEF +KATIGV+F T+S+EID K + AQ WDTAGQERFRAVTS YYRGAVGA+IVYDIT + +F +++RWL+EL+ ++ + M+VGNK DLE R V T+E ++ AE+ + F+ETSAL+STNV +FE ++ +IY VS K Sbjct: 9 YLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSK 178
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 6.482e-53 Identity = 105/206 (50.97%), Postives = 142/206 (68.93%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSCC 786 ++FK+V+IG+S VGK+NLLSR+ RNEF+ S+ TIGVEF T+++ + VKAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+ T+ + RWL EL H++ T+ MLVGNK DL R V TEE AE GL F+ETSALDSTNV+ AF+ V++EI++ VS++ NS A +TL ++ +CC Sbjct: 11 FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSA------ITLGNAQAGQDPGPGEKRACC 210
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.482e-53 Identity = 99/174 (56.90%), Postives = 134/174 (77.01%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNS 690 ++FK+V+IG+S VGK+NLLSR+ RNEF+ S+ TIGVEF T+++ + +KAQIWDTAG ER+RA+TSAYYRGAVGAL+V+D+T+ T+ + RWL EL H++ T+ MLVGNK DL R V TEE + AE GL F+ETSALDSTNV+ AFE V++EI++ VS++ N+ Sbjct: 11 FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNN 184
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50 Identity = 107/213 (50.23%), Postives = 149/213 (69.95%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLN-SDSYKAELSLN------RVTLVKSETDGSKQTSSYFSCC 786 YLFKIV+IGDS VGKSNLLSR+ +EFN SK+TIGVEF T+++E++ K++KAQIWDTAGQER+RA+TSAYYRGAVGALIVYDI++ +++++ + WL EL+ ++D VA L+GNK DL +R V T+E K+ A + F ETSAL+S NV AF +I I+ VS+ ++ S S + N ++L + + K+ SS +CC Sbjct: 12 YLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSS--NCC 222
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.818e-48 Identity = 97/205 (47.32%), Postives = 144/205 (70.24%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSC 783 YLFK+++IGDS VGK+ LL R++ + FN +TIG++F+ +++E+DGK++K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ + V RM++GNKCD+ R VS E G+ LA G+ F+ETSA STNV+ AF + R+I + ++RK+ +S+S A VK + SK+T S+F C Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSAGAG------GPVKITENRSKKT-SFFRC 204
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.681e-48 Identity = 97/205 (47.32%), Postives = 143/205 (69.76%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSC 783 YLFK+++IGDS VGK+ LL R++ + FN +TIG++F+ +++E+DGK++K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ + V RM++GNKCD+ R VS E G+ LA G+ F+ETSA STNV+ AF + R+I + ++RK+ +S+S A VK SK+T S+F C Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAG------GPVKITESRSKKT-SFFRC 204
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.681e-48 Identity = 97/205 (47.32%), Postives = 143/205 (69.76%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSC 783 YLFK+++IGDS VGK+ LL R++ + FN +TIG++F+ +++E+DGK++K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ + V RM++GNKCD+ R VS E G+ LA G+ F+ETSA STNV+ AF + R+I + ++RK+ +S+S A VK SK+T S+F C Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAG------GPVKITESRSKKT-SFFRC 204
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 1.071e-47 Identity = 96/205 (46.83%), Postives = 143/205 (69.76%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSC 783 YLFK+++IGDS VGK+ LL R++ + FN +TIG++F+ +++E+DGK++K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ + V RM++GNKCD+ R VS E G+ LA G+ F+ETSA S NV+ AF + R+I + ++RK+ +S+S A VK + SK+T S+F C Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAG------GPVKITENRSKKT-SFFRC 204
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.399e-47 Identity = 94/198 (47.47%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQ 762 YLFK +IIGD+ VGKS LL ++ F P TIGVEF + + IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + HS++ + ML+GNK DLES R V EEG++ A GL FMETSA ++NV+ AF +EIY + V + ++ + + + + GS Q Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNASHGSNQ 202
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.070e-47 Identity = 91/173 (52.60%), Postives = 121/173 (69.94%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLN 687 YLFK +IIGD+ VGKS LL ++ F P TIGVEF + + IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + HS++ + ML+GNK DLES R V EEG++ A GL FMETSA ++NV+ AF +EIY + V + Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFD 177 The following BLAST results are available for this feature:
BLAST of CX674863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674863 ID=CX674863; Name=CX674863; organism=Citrus sinensis; type=EST; length=797bpback to top |