CX674863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.809e-45 Identity = 90/205 (43.90%), Postives = 137/205 (66.83%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSC 783 YLFK+++IGDS VGK+ +L R++ + FN +TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ V +M++GNKCD+ R VS E G+ LA G+ FMETSA + NV+NAF + R+I + + +K+ + + VK + K+T S+F C Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHG------VKITVEQQKRT-SFFRC 204
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.809e-45 Identity = 90/205 (43.90%), Postives = 137/205 (66.83%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSC 783 YLFK+++IGDS VGK+ +L R++ + FN +TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ V +M++GNKCD+ R VS E G+ LA G+ FMETSA + NV+NAF + R+I + + +K+ + + VK + K+T S+F C Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHG------VKITVEQQKRT-SFFRC 204
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.497e-45 Identity = 89/205 (43.41%), Postives = 137/205 (66.83%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSC 783 YLFK+++IGDS VGK+ L R++ + FN +TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +F++I W+ ++ H+ V +M++GNKCD R VS E+G+ LA + G+ FMETSA + N++NAF + R+I + + +K+ + + VK D K+ SS+F C Sbjct: 7 YLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGSNQG------VKITPDQQKK-SSFFRC 204
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.486e-45 Identity = 88/157 (56.05%), Postives = 115/157 (73.25%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFE 639 +LFK +++GDSAVGKSNLL ++ F P+S TIGVEF ++S+ I+ K++K QIWDTAGQE+FR++T AYYRGAV A+IVYDITRR +F+S++ WL + + S V +L+GNK DLE+ R VST E K AE GL F ETSA + NV AFE Sbjct: 23 HLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFE 179
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.108e-44 Identity = 96/210 (45.71%), Postives = 132/210 (62.86%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKV--LNSDSYKAELSLNRVTLVKSETDGSKQTSSY-FSCCS 789 YLFK +IIGD+ VGKS LL ++ F P TIGVEF + + ID K +K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + H++ + MLVGNKCDL R VS EEG+ A+ GL FME SA + NV+ AF IY + V ++++SY ++ + ++ G+ +SS CCS Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGY----AIPGQSGGAGSSSSQGGGCCS 210
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 3.225e-44 Identity = 90/206 (43.69%), Postives = 133/206 (64.56%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSCC 786 +LFK +IIGD+ VGKS LL ++ F P TIGVEF + + ID K +K QIWDTAGQE FR++T +YYRG+ GAL+VYDITRR TF+ ++ WL + ++++++ + +L+GNK D+ES R VS EEG+ A+ GL F+ETSA ++NV+ AF +IY + + + ++ + L T S+ DG+ Q + CC Sbjct: 4 FLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNESFGIKLGAPT---SKQDGTDQKPAGGGCC 206
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 91/207 (43.96%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSCCS 789 YLFK+++IGDS VGKS LL R+A + + +TIGV+F+ +++E DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL+E+ ++ V ++LVGNKCDL R VS E GK+LA+ G+ F+ETSA D+TNV+ AF + EI + ++ + + S A + + + + SCCS Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMR-----------GQPVAQQSSCCS 202
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 90/205 (43.90%), Postives = 136/205 (66.34%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSC 783 YLFK+++IGDS VGK+ +L R++ + FN +TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ V +M++GNK D+ R VS E G+ LA G+ FMETSA + NV+NAF + R+I + + +K+ + + VK D K+ SS+F C Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQG------VKITPDQQKR-SSFFRC 204
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.600e-43 Identity = 80/163 (49.08%), Postives = 118/163 (72.39%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 657 YL K+++IGDS VGKS LL R++ + F P TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G L++YD+T + +FD++ W ++ H+ V ++L+GNKCD E R VS E+G++LA+ G+ F+E SA + NV AF + REI Sbjct: 8 YLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
BLAST of CX674863 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 2.730e-43 Identity = 85/167 (50.90%), Postives = 117/167 (70.06%), Query Frame = 1 Query: 169 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNV 669 Y+FK +IIGD VGKS LL ++ +F TIGVEF T+ +E+ G+++K QIWDTAGQERFRAVT +YYRGA GAL+VYDITRR+T++ +S WL + + ++ +L+GNK DLE+ R+V+ EE K AE GL F+E SA NV++AF ++IY N+ Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNI 176 The following BLAST results are available for this feature:
BLAST of CX674863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674863 ID=CX674863; Name=CX674863; organism=Citrus sinensis; type=EST; length=797bpback to top |