CX069603

Overview
NameCX069603
Unique NameCX069603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  154 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 516
            V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  248 VLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  154 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 516
            V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  248 VLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: FRMA_ECOHS (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=frmA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  154 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 516
            V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  248 VLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  154 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 516
            V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  248 VLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  154 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 516
            V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  248 VLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: ADHL2_ARATH (Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.047e-24
Identity = 56/124 (45.16%), Postives = 74/124 (59.68%), Query Frame = -2
Query:  148 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 519
            +VI EMT+ G D S EC G    M  AF+    G G  +++G+  K         +LL  RT+ GT FG  KP+ D+P +V++Y+ KE+ LE  ITH + F EINKAF L+  G SIRCII MD
Sbjct:  262 EVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGNSIRCIIWMD 385          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 8.047e-24
Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = -2
Query:  157 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 519
            +V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VGVP        +PM LL  RT KG  +G +K R  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR ++
Sbjct:  253 EVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAVYGGFKSREGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.373e-23
Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = -2
Query:  148 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 519
            +VI EMT GGVD S EC G    +  AF     G G  V++G+            +LL  R + G+ FG  KP+ D+P +V+ Y+ KE+ L+ FITH + F EINKAFDL++ G+S+RCI+ M+
Sbjct:  265 EVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHLTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGKSLRCILWMN 388          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.793e-23
Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = -2
Query:  157 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 516
            V+ ++   G+D + EC G+V  M  A E  H GWG ++++GV        T P  L+  R  KG+ FG  K RS+LP +VE  M  +++LE F+TH +P  +IN+AF+LM  G+SIR +I
Sbjct:  257 VLLDINKWGIDHTFECIGNVNVMRQALESAHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPQMVEDSMKGDIQLEPFVTHTMPLDKINEAFELMHEGKSIRTVI 376          
BLAST of CX069603 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 1.793e-23
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  154 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 516
            V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  248 VLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAVAGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
The following BLAST results are available for this feature:
BLAST of CX069603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
FRMA_ECOL56.162e-2442.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK16.162e-2442.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOHS6.162e-2442.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO576.162e-2442.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO246.162e-2442.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADHL2_ARATH8.047e-2445.16Alcohol dehydrogenase-like 2 OS=Arabidopsis thalia... [more]
ADH1B_PAPHA8.047e-2442.15Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADHL5_ARATH1.373e-2342.74Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
FRMA_HAEIN1.793e-2340.83S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
FRMA_ECOLI1.793e-2342.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11F04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11F04-L7-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069603 ID=CX069603; Name=CX069603; organism=Citrus sinensis; type=EST; length=520bp
ACAACTCTTTGAAAGCCATTCGCAGCAAGTCATCAAACATACAGCATAAA
TTACTTATTCTCGGGGTAATATATAACTTGGAAAATTATGTGATCATCTT
CATTCTGCCTCCATTAGATTGATCAGCAACAGCAGACACATCTAACCATC
CATGCGAATGATGCACCTAATGCTTTCTCCCGAAAGCATGAGGTCAAATG
CCTTGTTTATCTCCGAGAAGGGCACAGCATGAGTGATGAATTTCTCAAGC
TCCATCTCCTTGTTCATGTATTTTTCAACAACTGAAGGAAGATCAGAGCG
AGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAGAGTCCTCTCATTAAGCA
GATTCATGGGATGAGTCTTGAATGCATCATCTTTGTTTGGCACACCCACA
AGCACAGCAACACCCCAACCATCGTGAACGCATTCAAATGCTGAGATCAT
GGCCTGGACGCTTCCAGTACATTCAACACTTCTATCCACTCCACCATTGG
TCATTTCAGCAATCACCTGT
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