CV887372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_BDEBA (Peptidyl-tRNA hydrolase OS=Bdellovibrio bacteriovorus GN=pth PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.434e-22 Identity = 42/129 (32.56%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDP-KAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 + D PV+ KPQTYMNLSGES PL +YK+PL R++V HD++ P KS+ + G+ ++ RLR+G+GRP P ++L KF ++ L + + ++ ++ G+ Sbjct: 51 IKDHPVIFCKPQTYMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSI-SGLMGSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGI 178 HSP 2 Score: 48.1358 bits (113), Expect = 8.434e-22 Identity = 20/33 (60.61%), Postives = 23/33 (69.70%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQG 425 WL VGLGNPG +YK TRHN+GF +D E G Sbjct: 2 WLIVGLGNPGGEYKLTRHNIGFMAVDFLMEGLG 34
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_DESRM (Peptidyl-tRNA hydrolase OS=Desulfotomaculum reducens (strain MI-1) GN=pth PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.093e-21 Identity = 49/128 (38.28%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKG 853 +G V+LAKPQTYMNLSG+S L +YKL + + V DDM LP GV K+++ G ++F R+R+GIGRP G +D +L K + E I+ A+Q VE +K+ + +G Sbjct: 51 IGSEKVILAKPQTYMNLSGQSVVALMNWYKLSPDELFVITDDMDLPPGVLRIRKNGSAGGQRGLKNII-ELLGTQQFPRMRVGIGRPEHGAVD---HVLGKISEAEAELINPAIQTAVEAVKVWVLEG 174 HSP 2 Score: 45.8246 bits (107), Expect = 1.093e-21 Identity = 22/46 (47.83%), Postives = 27/46 (58.70%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQ 467 L VGLGNPG +Y TRHN+GF +ID A+ +S KA Q Sbjct: 3 LIVGLGNPGTEYAKTRHNIGFMVIDRLADESRVSTEKNQHKAQICQ 48
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_ANADE (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pth PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.096e-21 Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKG 853 +G V + KPQTYMN SGE+ G ++KL L+ ++V HDD+ L KSV N G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G Sbjct: 51 LGPERVWILKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELEPFRVQLKVGGGHGGHNGVKSV-NAHVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELG 176 HSP 2 Score: 45.0542 bits (105), Expect = 1.096e-21 Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 L VGLGNPG++Y TRHNVGF + D A+ G S A + L Sbjct: 3 LVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFTAKKFAAELAEARL 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_RENSM (Peptidyl-tRNA hydrolase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=pth PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.425e-21 Identity = 40/129 (31.01%), Postives = 70/129 (54.26%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 +G ++LAKPQT+MNLSG T LA +Y L + V+ D++ +P + + + G +E+ R+R+G+GRPP GQ D +L+ F+ ++ + +Q+ + ++LL+S GL Sbjct: 56 MGGPKLVLAKPQTFMNLSGGPTSALAKFYDLGADNVIAVQDEIDIPFNTIKLKIGGGEGGHNGLRDI-SKALGAKEYLRVRVGVGRPPGGQGDAAGHVLKVFSTAEKKELPFLIQDAADAVELLISDGL 183 HSP 2 Score: 49.2914 bits (116), Expect = 1.425e-21 Identity = 23/56 (41.07%), Postives = 31/56 (55.36%), Query Frame = 3 Query: 315 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLLVM 482 ++ WL VGLGNPG Y TRHN+GF + + A G S + +A +G L M Sbjct: 1 MSNTWLVVGLGNPGPDYSHTRHNIGFMVAEELASRIGASFKSNKSRALVAEGRLGM 56
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_DEHE1 (Peptidyl-tRNA hydrolase OS=Dehalococcoides ethenogenes (strain 195) GN=pth PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.427e-21 Identity = 45/131 (34.35%), Postives = 65/131 (49.62%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQ---MDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 + D ++LAKPQTYMNLSG++ L Y L ++V DD+ LP G S++ + G +EF RL+IGIG+P + + +L F RE +D A+ E L LL+ GL Sbjct: 51 INDEEIVLAKPQTYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI-GTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGL 180 HSP 2 Score: 51.2174 bits (121), Expect = 1.427e-21 Identity = 22/47 (46.81%), Postives = 29/47 (61.70%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG 470 L +GLGNPG +Y G RHNVGF+ + FA+ IS + C + G G Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSG 49
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_STRCO (Peptidyl-tRNA hydrolase OS=Streptomyces coelicolor GN=pth PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.852e-21 Identity = 42/148 (28.38%), Postives = 75/148 (50.68%), Query Frame = 2 Query: 428 FYEHGSLQSYFRTRFVG-----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 F HG Q+ +G + V+LAKP ++MN+SG L +YK+P+ ++ HD++ + GV KS+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+ +GL Sbjct: 46 FKRHGKAQAQVVEGRIGPPGPANRRVILAKPMSFMNVSGGPVTALRDFYKVPVGNIVAVHDELDIDYGVLRLKLGGGDNGHNGLKSITKSL--GADYHRVRFGIGRPPGRMPVADFVLRDFSSTERKELDYFVDRAADAVEALVIEGL 191 HSP 2 Score: 48.1358 bits (113), Expect = 1.852e-21 Identity = 21/39 (53.85%), Postives = 23/39 (58.97%), Query Frame = 3 Query: 309 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQG 425 T PWL GLGNPG +Y RHNVGF + D AE G Sbjct: 5 TDAGAPWLVAGLGNPGPEYASNRHNVGFMVADLLAERIG 43
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_ARTCA (Peptidyl-tRNA hydrolase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=pth PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.854e-21 Identity = 38/128 (29.69%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 +G V+LAKP TYMN+SG LA +Y + + V+ HD++ +P + + +++ R+R+G+GRPPG+MD ++L+ F + + L E + ++LLL +GL Sbjct: 56 IGGPRVVLAKPMTYMNVSGGPVSALANFYGISPDHVVAVHDEIDIPFNTVKLKIGGGEGGHNGLRDISKAL-ATKDYLRVRVGVGRPPGRMDTADYVLRDFGTAELKELPFLLDEAADAVELLLQEGL 182 HSP 2 Score: 47.3654 bits (111), Expect = 1.854e-21 Identity = 22/50 (44.00%), Postives = 29/50 (58.00%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 WL VGLGNPG +Y+G RHNVG ++D A G + +A +G L Sbjct: 5 WLIVGLGNPGAQYQGNRHNVGQMVLDELAGRVGAGFKSHKARAQVVEGRL 54
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_SYNAS (Peptidyl-tRNA hydrolase OS=Syntrophus aciditrophicus (strain SB) GN=pth PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.854e-21 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 2 Query: 488 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 775 VLLAKPQT+MNLSG+S LA ++K+ + VLV HDD+ LP GV S+ ++ G EF R+R+GIG+P + + ++L+ F Sbjct: 56 VLLAKPQTFMNLSGKSVRKLADFFKIVVEDVLVVHDDLDLPFGVIRLKAGGGQGGHKGLISICDSL-GGPEFQRVRLGIGKPAQRSAVERYVLEPF 150 HSP 2 Score: 52.7582 bits (125), Expect = 1.854e-21 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 L VGLGNPG +Y+ TRHN GF ++D AE Q I M+ A +G+G++ Sbjct: 3 LIVGLGNPGARYRFTRHNFGFFVLDQLAEDQDIMMSQTGFDALWGKGVI 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_MOOTA (Peptidyl-tRNA hydrolase OS=Moorella thermoacetica (strain ATCC 39073) GN=pth PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.856e-21 Identity = 45/127 (35.43%), Postives = 63/127 (49.61%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKG 853 VG+ VLL KPQTYMN SG++ PLA +Y + +LV HDD+ L G +S++ + G RL+IGIGRPP + ++L+ F+ E I L E + LL G Sbjct: 54 VGNNRVLLVKPQTYMNNSGQAVAPLARWYGIAPEAILVIHDDLDLAPGRLRLRRGGSSGGHRGLQSIITHL-GTTAVPRLKIGIGRPPLGQNVIDYVLKPFSEGDWELIRPVLLEAARAARFLLEGG 179 HSP 2 Score: 52.7582 bits (125), Expect = 1.856e-21 Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 + VGLGNPG +Y TRHN GF ++D A+ GI+++ +A GQGL+ Sbjct: 6 MVVGLGNPGPRYATTRHNAGFMVVDLLADDLGITLDRTREQALTGQGLV 54
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_MANSM (Peptidyl-tRNA hydrolase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=pth PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.412e-21 Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 +G V P T+MNLSG++ G LA +Y++ +LV HD++ LP GV K + N+ F RLRIGIG P + A++L K + I R ID AL E +++LL G+ Sbjct: 55 IGGEEVRFLIPTTFMNLSGKAVGALATFYRIKPEEILVIHDELDLPPGVAKIKQGGGHGGHNGLKDTIAQLANNKNFYRLRIGIGHPGDKNLVSAYVLSKPSPIDRSAIDKALDEAASCMEILLKDGI 182 HSP 2 Score: 40.4318 bits (93), Expect = 2.412e-21 Identity = 17/28 (60.71%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFA 413 L VGLGNPGDKY TRHN G +++ A Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLVERLA 33 The following BLAST results are available for this feature:
BLAST of CV887372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887372 ID=CV887372; Name=CV887372; organism=Citrus sinensis; type=EST; length=857bpback to top |