CV887372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_CLOB8 (Peptidyl-tRNA hydrolase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pth PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.980e-20 Identity = 40/126 (31.75%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 470 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF----NAIARERIDTALQERVEVLK 835 F+ V+L KP TYMNLSGES + +Y L + +LV +DD+ L G KS++ + + F+R+++G+G+P G D +L KF AI E I+ + + E++K Sbjct: 50 FINGKKVMLLKPTTYMNLSGESVREVVDFYNLNNDEILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIAHL-NSEIFSRIKVGVGQPNG--DLVKHVLGKFTKEETAILSESIEASTKAAAEIIK 172 HSP 2 Score: 56.6102 bits (135), Expect = 1.980e-20 Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 +L VGLGNPG++Y+ TRHN+GF++ID A+ I +N K +G+G + Sbjct: 2 FLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFI 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_GLOVI (Peptidyl-tRNA hydrolase OS=Gloeobacter violaceus GN=pth PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.572e-20 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 491 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 +L KP TYMN SG+S +A Y++LP ++LV +D++ LP G KS++ + G +FARLRIGIGR P ++L KF +E++ L VE ++ +L+KGL Sbjct: 60 ILLKPTTYMNHSGQSVRAVADYFRLPPQQLLVLYDEVALPLGKIRLRPEGSAAGHNGIKSLIEHL-GTNQFARLRIGIGREPPPPVLTNYVLGKFAPEEQEQLPAILDGCVEAVEAVLAKGL 180 HSP 2 Score: 43.1282 bits (100), Expect = 2.572e-20 Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAE 416 LFVGLGNPG +Y TRHN GF +DA A+ Sbjct: 5 LFVGLGNPGLQYTQTRHNAGFLAVDALAK 33
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_CLOBB (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=pth PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.575e-20 Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 2 Query: 470 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQERVEVLK 835 F+ + V+L KP TYMNLSG+S +A +YK+ ++V +DD+ L G KS++ N F R+++G+G+P +D ++L KF+ + +E I+ A E++K Sbjct: 50 FIANNKVILLKPTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL-STDVFPRIKVGVGQP--NIDLVNYVLGKFSKEEKEVLKESIEVATNSVEEIIK 172 HSP 2 Score: 56.225 bits (134), Expect = 2.575e-20 Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 +L VGLGNPG KY TRHN+GFE+ID + I +N + +G+G + Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFRGVYGEGFI 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_CLOPE (Peptidyl-tRNA hydrolase OS=Clostridium perfringens GN=pth PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.352e-20 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 470 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 811 F+ + V+L KP TYMNLSGES LA +YKL + ++V +DD+ L G KS++ N G++ F R+++G+G+P + +L KF+ RE I+ + Sbjct: 50 FIENKKVILLKPLTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVI 160 HSP 2 Score: 52.7582 bits (125), Expect = 3.352e-20 Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 L VGLGNPG +Y+ TRHN+GF++ID A I +N K G+G + Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFI 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_CLOP1 (Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pth PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.352e-20 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 470 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 811 F+ + V+L KP TYMNLSGES LA +YKL + ++V +DD+ L G KS++ N G++ F R+++G+G+P + +L KF+ RE I+ + Sbjct: 50 FIENKKVILLKPLTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVI 160 HSP 2 Score: 52.7582 bits (125), Expect = 3.352e-20 Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 L VGLGNPG +Y+ TRHN+GF++ID A I +N K G+G + Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFI 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH1_CORJK (Peptidyl-tRNA hydrolase 1 OS=Corynebacterium jeikeium (strain K411) GN=pth1 PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.358e-20 Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 2 Query: 488 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 775 V+LA+P+T+MN+SG LAA++K+P ++V +DD+ G KS+ + G +++ RL GIGRPPG+MDP A++L+ F Sbjct: 72 VVLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKSITKSL-GTKDYWRLSCGIGRPPGRMDPAAYVLKPF 166 HSP 2 Score: 47.3654 bits (111), Expect = 4.358e-20 Identity = 23/40 (57.50%), Postives = 26/40 (65.00%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQ--GISMNT 440 WL VGLGNPGDKY TRHNVG +I + Q S+NT Sbjct: 15 WLIVGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASLNT 54
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_CLOBA (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=pth PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 4.358e-20 Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 470 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQERVEVLK 835 F+ + V+L KP TYMNLSG+S +A +YK+ ++V +DD+ L G KS++ N F R+++G+G+P + ++L KF+ + +E I+ A E++K Sbjct: 50 FIANNKVILLKPTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL-STDVFPRIKVGVGQPNDNL--VDYVLGKFSKEEKEVLKESIEAATNSVEEIIK 172 HSP 2 Score: 57.3806 bits (137), Expect = 4.358e-20 Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 +L VGLGNPG KY TRHN+GFE+ID + I +N K +G+G + Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFI 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_THETN (Peptidyl-tRNA hydrolase OS=Thermoanaerobacter tengcongensis GN=pth PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 4.363e-20 Identity = 39/123 (31.71%), Postives = 63/123 (51.22%), Query Frame = 2 Query: 488 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 V+L KPQT+MNLSGE+ +YK+PL V+V +DD L G S++ + +F R+RIGIG+P D +L +F+ ++ ID A++ E + ++ G+ Sbjct: 56 VILLKPQTFMNLSGEALYDAVNFYKIPLENVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSII-YLLNSEDFPRVRIGIGKPE-DGDLVRHVLGRFSDEEKKVIDEAVERAAEAVIDIMENGI 176 HSP 2 Score: 56.225 bits (134), Expect = 4.363e-20 Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG 470 ++ GLGNPG +Y+GTRHNVGF +IDA ++ GI ++ + K+ G+G Sbjct: 2 YIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEG 49
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_ALKMQ (Peptidyl-tRNA hydrolase OS=Alkaliphilus metalliredigens (strain QYMF) GN=pth PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.363e-20 Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQ 467 ++ VGLGNPG KY GTRHNVGF++ID A GI++N + KA +G+ Sbjct: 2 YIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGE 48 HSP 2 Score: 58.5362 bits (140), Expect = 4.363e-20 Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRP 733 +G V+LAKPQT+MNLSGES + +YK+ ++V +DD+ + G KS + + + F R+RIG+GRP Sbjct: 51 IGGEKVILAKPQTFMNLSGESIREMMQFYKIDPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIYQLQTD-AFPRIRIGVGRP 136
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_SULSY (Peptidyl-tRNA hydrolase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=pth PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.672e-20 Identity = 42/126 (33.33%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 479 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 D V++AKPQTYMNLSG + + YK+ + +LV +DD+ LP G KS++N + EF RL+IGIGRP + + ++L F + +D L E + +L G+ Sbjct: 53 DYDVIIAKPQTYMNLSGNAVLNILKDYKIKPSEILVVYDDLDLPLGAVRLRLKGSSGGHNGIKSIINTIK-TEEFPRLKIGIGRPEKKEEVSDYVLSPFTKEEKFLLDKVLAHANECILNVLKYGI 177 HSP 2 Score: 46.2098 bits (108), Expect = 5.672e-20 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 3 Query: 336 VGLGNPGDKYKGTRHNVGFEMIDAFAES 419 +GLGNPG+KYK TRHNVGF + D A+S Sbjct: 6 IGLGNPGEKYKNTRHNVGFMVADLVAKS 33 The following BLAST results are available for this feature:
BLAST of CV887372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887372 ID=CV887372; Name=CV887372; organism=Citrus sinensis; type=EST; length=857bpback to top |