EY665710

Overview
NameEY665710
Unique NameEY665710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665710_ssr269 microsatellite EY665710_ssr269:269..280. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.335e-45
Identity = 88/131 (67.18%), Postives = 103/131 (78.63%), Query Frame = 2
Query:  335 YCSEIEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTL 727
            YC+ I+A     ++KNMITG    DC  LII+ST   ++AGIS DGQT E+ALLAF LG KQMICCCN MD TTP  S++R+ EI KEVSSYLKKVGYNP KI F+PISGFEG N+ID++TNLDWYKGPTL
Sbjct:   86 YCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTL 216          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A1_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.074e-45
Identity = 86/130 (66.15%), Postives = 103/130 (79.23%), Query Frame = 2
Query:  338 CSEIEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTL 727
            C+ I+A     ++KNMITG    DC  LII+ST   + AGIS DGQT E+ALLAF LG KQMICCCN MD TTP  S++RY+EI KEVSSYLKKVGYNP K+PF+PISGFEG N+I++++NLDWYKGPTL
Sbjct:   87 CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGVFQAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKVPFVPISGFEGDNMIERSSNLDWYKGPTL 216          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A2_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare GN=BLT63 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 2
Query:  338 CSEIEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTL 727
            C+ I+A     ++KNMITG    DC  LII+ST   ++AGIS DGQT E+ALLAF LG K MICCCN MD TTP  S++RY+EI KEVSSYLKKVGYNP K+PF+PISGFEG N+I++++NLDWYKGPTL
Sbjct:   87 CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKHMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKVPFVPISGFEGDNMIERSSNLDWYKGPTL 216          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A_PEA (Elongation factor 1-alpha OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.928e-44
Identity = 86/131 (65.65%), Postives = 102/131 (77.86%), Query Frame = 2
Query:  335 YCSEIEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTL 727
            Y + ++A     ++KNMITG    DC  LII+ST   ++AGIS DGQT E+ALLAF LG KQMICCCN MD TTP  S+ RY EI KEVSSYLK+VGYNP KIPF+PISGFEG N+I+++TNLDWYKGPTL
Sbjct:   86 YSTVMDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYEEIVKEVSSYLKEVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A_TRYBB (Elongation factor 1-alpha OS=Trypanosoma brucei brucei GN=TEF1 PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 3.086e-34
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 2
Query:  347 IEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTL 727
            I+A     ++KNMITG    D   LII S   E++AGIS DGQT E+ALLAF LG KQM+ CCN MD  T    + RY+EI KEVS+Y+KKVGYN +K+ F+PISG++G N+I+K+  + WYKGPTL
Sbjct:   90 IDAPGHRDFIKNMITGTSQADAAILIIASAQGEFEAGISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVNYGQERYDEIVKEVSAYIKKVGYNVEKVRFVPISGWQGDNMIEKSEKMPWYKGPTL 216          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A_TETPY (Elongation factor 1-alpha OS=Tetrahymena pyriformis PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.874e-34
Identity = 73/127 (57.48%), Postives = 87/127 (68.50%), Query Frame = 2
Query:  347 IEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTL 727
            I+A     ++KNMITG    D   L+I S   E++AGIS DGQT E+ALLAF LG KQMI C N MD  T   SE RY EI KE+S YLKKVGY P  IPF+PISGF G N+++++TN  WYKGP L
Sbjct:   91 IDAPGHRDFIKNMITGTSQADVAILMIASPQGEFEAGISKDGQTREHALLAFTLGVKQMIVCLNKMDEKTVNFSEERYQEIKKELSDYLKKVGYKPDTIPFIPISGFNGDNMLERSTNAPWYKGPIL 217          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A_EUGGR (Elongation factor 1-alpha OS=Euglena gracilis GN=TEF PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.173e-33
Identity = 72/129 (55.81%), Postives = 90/129 (69.77%), Query Frame = 2
Query:  347 IEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTLEG 733
            I+A     ++KNMITG    D   L+I+ST   ++AGIS DGQT E+ALLA+ LG KQMI   N  D  T   S+ARY EI KEVS YLKKVGYNP+K+PF+PISG+ G N+I+ + N+ WYKG TL G
Sbjct:   90 IDAPGHRDFIKNMITGTSQADAAVLVIDSTTGGFEAGISKDGQTREHALLAYTLGVKQMIVATNKFDDKTVKYSQARYEEIKKEVSGYLKKVGYNPEKVPFIPISGWNGDNMIEASENMGWYKGLTLIG 218          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A_ONCVO (Elongation factor 1-alpha OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.000e-33
Identity = 67/132 (50.76%), Postives = 93/132 (70.45%), Query Frame = 2
Query:  335 YCSEIEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTLE 730
            Y + I+A     ++KNMITG    DC  L++     E++AGIS +GQT E+ALLA  LG KQMI  CN MD+T P  SEAR+ E+  EVS+Y+KK+GYNP+ IPF+PISGF G N+++ + N+ W+KG ++E
Sbjct:   86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQMIVACNKMDSTDPPFSEARFGEVTTEVSNYIKKIGYNPKSIPFVPISGFNGDNMLEPSANMPWFKGWSVE 217          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 2.000e-33
Identity = 67/131 (51.15%), Postives = 95/131 (72.52%), Query Frame = 2
Query:  335 YCSEIEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTL 727
            Y + I+A     ++KNMITG    DC  L+I S   E++AGI+ +GQT E+ALLA+ LG KQMI   N MD  +   S+ARY+EI KEVSS++KK+GYNP+K+ F+PISG+ G N+++++  ++WYKGPTL
Sbjct:   86 YFTIIDAPGHRDFIKNMITGTSQADCAVLVIASPTGEFEAGIAKNGQTREHALLAYTLGVKQMIVAINKMDEKSTNYSQARYDEIVKEVSSFIKKIGYNPEKVAFVPISGWNGDNMLERSDKMEWYKGPTL 216          
BLAST of EY665710 vs. ExPASy Swiss-Prot
Match: EF1A3_OSCTI (Elongation factor 1-alpha 3 OS=Oscheius tipulae GN=eft-3 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.456e-33
Identity = 69/132 (52.27%), Postives = 92/132 (69.70%), Query Frame = 2
Query:  335 YCSEIEAERLPGYMKNMITGACLDDCLALIINSTAAEYDAGISTDGQTSENALLAFALGEKQMICCCNTMDTTTPIDSEARYNEIGKEVSSYLKKVGYNPQKIPFMPISGFEGGNLIDKATNLDWYKGPTLE 730
            Y + I+A     ++KNMITG    DC  L++     E++AGIS +GQT E+ALLA  LG KQMI  CN MD+T P  SE R++EI  EV S+LKKVGYNP  IPF+PISGF G N+++ ++N+ WYKG ++E
Sbjct:   87 YVTIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQMIVACNKMDSTEPPFSEKRFDEIVTEVKSFLKKVGYNPATIPFVPISGFNGDNMLEPSSNMSWYKGWSVE 218          
The following BLAST results are available for this feature:
BLAST of EY665710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
EF1A2_DAUCA1.335e-4567.18Elongation factor 1-alpha OS=Daucus carota PE=2 SV... [more]
EF1A1_HORVU5.074e-4566.15Elongation factor 1-alpha OS=Hordeum vulgare PE=1 ... [more]
EF1A2_HORVU1.130e-4465.38Elongation factor 1-alpha OS=Hordeum vulgare GN=BL... [more]
EF1A_PEA1.928e-4465.65Elongation factor 1-alpha OS=Pisum sativum PE=2 SV... [more]
EF1A_TRYBB3.086e-3455.91Elongation factor 1-alpha OS=Trypanosoma brucei br... [more]
EF1A_TETPY6.874e-3457.48Elongation factor 1-alpha OS=Tetrahymena pyriformi... [more]
EF1A_EUGGR1.173e-3355.81Elongation factor 1-alpha OS=Euglena gracilis GN=T... [more]
EF1A_ONCVO2.000e-3350.76Elongation factor 1-alpha OS=Onchocerca volvulus P... [more]
EF1A_DICDI2.000e-3351.15Elongation factor 1-alpha OS=Dictyostelium discoid... [more]
EF1A3_OSCTI4.456e-3352.27Elongation factor 1-alpha 3 OS=Oscheius tipulae GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665710 ID=EY665710; Name=EY665710; organism=Citrus sinensis; type=EST; length=806bp
ACTATAAATGGCGGACGCGGTCCACACATCTTCAATCTCATGCTCATCAA
CTAATATCATTTCTCTCAATACTAACACAACGGCTCTAGATTCTCTGCAT
TTACGCTCTCTCTCCGCTTTCCATTGCGACTAATCAACCTGTTACACGTG
TGCACCCCTCCTCTCCAAGAATACTCTCTCTCGATCGACAAGGCTTCATA
AGTCGTAGACGAAACAAGGGGGGAGGACCAGATCTGGGTCGCCGATGTCC
GCCGGGTCCAATCATTCCATGATGATGATGACCACTCTATTGGCGTTGCA
ATCGATTAGGATAATAACAAGCACCTTGGACGACTACTGCTCCGAAATTG
AGGCTGAACGACTTCCAGGATATATGAAAAACATGATAACGGGTGCTTGC
CTCGATGACTGTCTTGCTCTGATCATTAACTCTACCGCTGCTGAATATGA
TGCTGGTATCTCCACTGATGGACAGACATCAGAGAATGCTTTGCTTGCTT
TCGCCCTTGGTGAGAAGCAGATGATTTGCTGCTGTAACACGATGGACACC
ACCACCCCCATTGATTCGGAGGCTAGGTACAATGAAATTGGGAAGGAGGT
CTCTTCCTACCTGAAGAAAGTTGGATACAACCCCCAAAAAATCCCTTTCA
TGCCCATCTCTGGTTTCGAGGGGGGGAACTTGATTGATAAGGCTACCAAC
CTTGACTGGTACAAGGGACCCACCCTGGAGGGGCGCCCTTGAAAATTTCA
TTAACCCTAAAAGGGCCTCAAAAAAAACCCTTTCGGGTGGCTCCTCAAAG
AAGGGT
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