CX069602

Overview
NameCX069602
Unique NameCX069602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.974e-47
Identity = 86/124 (69.35%), Postives = 104/124 (83.87%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 374
            +VI EMT+GGV+R+VECTG+  AMISAFECVHDGWGVA      +K+  FKTHPMN LNERTL+GTFFGNYKPR+ LP VV+ YM KE+EL+KFITH++PFS+IN AFDLML GE +RC+IR +
Sbjct:  255 EVIVEMTDGGVNRAVECTGNADAMISAFECVHDGWGVA------HKEAVFKTHPMNFLNERTLRGTFFGNYKPRTGLPGVVDMYMRKELELDKFITHSLPFSQINTAFDLMLRGEGLRCVIRSE 372          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.903e-31
Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 374
            QVI ++T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+NKE+++++++TH++  ++INKAFDL+  G  +RC++  D
Sbjct:  257 QVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATD 380          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.903e-31
Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 374
            QVI ++T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+NKE+++++++TH++  ++INKAFDL+  G  +RC++  D
Sbjct:  257 QVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATD 380          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.844e-30
Identity = 59/121 (48.76%), Postives = 82/121 (67.77%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            QVI ++T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+ KE++++++ITH +   EINKAFDL+  G+ +RC++
Sbjct:  254 QVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLLEINKAFDLLHEGQCLRCVL 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 5.844e-30
Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +VI ++T+GGVD S EC G+V  M +A EC H GWG +V+VGV        T P  L+  R  KGT FG +K R+ +P +VEKYMNKE++++++ITH +   EINKAFDL+  G  +RC++
Sbjct:  255 EVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVL 375          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 9.968e-30
Identity = 56/123 (45.53%), Postives = 89/123 (72.36%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            +V+ EMT+GGVD S EC G+V+ M +A E  H GWG++V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+TH++PF +IN+AFDLM +G+SIR ++++
Sbjct:  252 EVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFDLMHAGKSIRTVVKL 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 127.487 bits (319), Expect = 3.788e-29
Identity = 58/123 (47.15%), Postives = 87/123 (70.73%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            +V+ EMT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+TH + F EINKAF+LM SG+SIR ++++
Sbjct:  252 EVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.788e-29
Identity = 56/121 (46.28%), Postives = 83/121 (68.60%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            QV+ EMT+GGVD S EC G++  M +A E  H GWG +V++GV        T P  L+  RT KGT FG YK    +P +VE+YMNK++++++F+TH +PF +I++ FDLM +G+SIR ++
Sbjct:  253 QVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAFGGYKSVESVPKLVEEYMNKKVKVDEFVTHTLPFEKIHEGFDLMGAGKSIRTVL 373          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 3.788e-29
Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            QVI  MT GG D S EC G      +A +   DGWG+ V +GVP        H    L+ ++LKGT FG +KP+SDLPS+++KYMNKE+ +++FITH + F EINKAF LM  G+ +RC++ M
Sbjct:  257 QVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVLHM 379          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.947e-29
Identity = 57/122 (46.72%), Postives = 86/122 (70.49%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 368
            +V+ EMT+GGVD S EC G+V  M +A E  H GWGV+V+VGV        T P  L+  RT KGT FG +K    +P +V++YM+K+M++++F+TH +PF +IN+AF+LM +G+SIR +++
Sbjct:  251 EVLIEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGKSIRSVLK 372          
The following BLAST results are available for this feature:
BLAST of CX069602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH2_HORVU8.974e-4769.35Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADHX_ORYSJ6.903e-3147.58Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI6.903e-3147.58Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_PEA5.844e-3048.76Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_ARATH5.844e-3047.93Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_BOVIN9.968e-3045.53Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_HUMAN3.788e-2947.15Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHL_GADMO3.788e-2946.28Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADHL6_ARATH3.788e-2947.97Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_UROHA4.947e-2946.72Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11F04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11F04-L7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069602 ID=CX069602; Name=CX069602; organism=Citrus sinensis; type=EST; length=524bp
AACAGGTGATTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTTGAA
TGTACTGGAAGCGTCCAGGCCATGATCTCAGCATTTGAATGCGTTCACGA
TGGTTGGGGTGTTGCTGTGCTTGTGGGTGTGCCAAACAAAGATGATGCAT
TCAAGACTCATCCCATGAATCTGCTTAATGAGAGGACTCTTAAGGGTACC
TTCTTTGGCAACTACAAACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAA
ATACATGAACAAGGAGATGGAGCTTGAGAAATTCATCACTCATGCTGTGC
CCTTCTCGGAGATAAACAAGGCATTTGACCTCATGCTTTCGGGAGAAAGC
ATTAGGTGCATCATTCGCATGGATGGTTAGATGTGTCTGCTGTTGCTGAT
CAATCTAATGGAGGCAGAATGAAGATGATCACATAATTTTCCAAGTTATA
TATTACCCCGAGAATAAGTAATTTATGCTGTATGTTTGATGACTTGCTGC
GAATGGCTTTCAAAGAGTTGTCCT
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