CX069602

Overview
NameCX069602
Unique NameCX069602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.947e-29
Identity = 56/121 (46.28%), Postives = 81/121 (66.94%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ EMT+GGVD S EC G+V+ M SA E  H GWG +V++GV        T P  L+  R  K T FG +K    +P +VE YMNK++++++F+TH +PF  IN+ FDLM +G+SIRC++
Sbjct:  253 EVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGAGQEIATRPFQLVTGRVWKATAFGGWKSVESVPKLVEDYMNKKLKVDEFVTHTLPFDSINEGFDLMHAGKSIRCVL 373          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 8.438e-29
Identity = 59/123 (47.97%), Postives = 85/123 (69.11%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            +V+ EMT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+T  + F +INKAFDLM SG SIR +++M
Sbjct:  252 EVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSIRTVLKM 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 8.438e-29
Identity = 58/123 (47.15%), Postives = 86/123 (69.92%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            +V+ EMT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+T  + F +IN+AFDLM SG+SIR +++M
Sbjct:  252 EVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.439e-28
Identity = 55/123 (44.72%), Postives = 88/123 (71.54%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            +V+ EMT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+TH++ F +IN+AF+LM +G+SIR ++++
Sbjct:  252 EVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHSLSFDQINEAFELMHAGKSIRTVVKL 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 9.330e-28
Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ EMT+GGVD S EC G+VQ M +A E  H GWG +V++GV        T P  L+  R  KGT FG +K    +P +VE YM+K++++++F+TH +PF +IN+ F+LM +G+SIR ++
Sbjct:  254 EVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGWKSVESVPKLVEDYMSKKLKVDEFVTHTLPFEKINEGFELMHAGKSIRTVL 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.078e-27
Identity = 53/123 (43.09%), Postives = 82/123 (66.67%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            Q + ++T+GGVD S EC G+V  M +A EC H GWGV+ +VGV        T P  L+  R  KG+ FG  K RS LPS+++KYM+K++++++++T   P +EIN AFD+M  G+S+R ++ +
Sbjct:  257 QHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVAPAGAEISTRPFQLVTGRVWKGSAFGGVKSRSQLPSIIDKYMDKKLKVDEYVTFTYPLNEINTAFDVMHEGKSLRSVVNL 379          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 2.714e-27
Identity = 54/123 (43.90%), Postives = 85/123 (69.11%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            +V+ E T+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++ +++F+T+ + F +IN+AF+LM SG+SIR ++++
Sbjct:  252 EVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAGAGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKINVDEFVTNTLSFDQINEAFELMHSGKSIRTVVKI 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.545e-27
Identity = 59/121 (48.76%), Postives = 75/121 (61.98%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            QVI EMT  GVD S EC G+V+ M SA EC H GWG +V++GV        T P  L+  R   GT FG  K RS LP +VE+ M  E++L  F+TH +   +IN+AFDLM  G+SIR +I
Sbjct:  247 QVIVEMTGWGVDHSFECIGNVEVMRSALECAHRGWGQSVIIGVAGAGQEISTRPFQLVTGRKWMGTAFGGVKGRSQLPGMVEQSMRGEIQLAPFVTHTMELKDINQAFDLMHDGKSIRSVI 367          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.032e-26
Identity = 55/121 (45.45%), Postives = 80/121 (66.12%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ EMT+ GVD + EC G+V  M +A E  H GWG +V+VGV    +   T P  L+  R  KGT FG +K R  +P +V+ YMNK++ L++F++H + F +IN+AFDLM  GESIR ++
Sbjct:  254 KVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVL 374          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 2.298e-26
Identity = 54/120 (45.00%), Postives = 79/120 (65.83%), Query Frame = 3
Query:    9 IAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 368
            + ++T+GG D + EC G+V  M SA E  H GWG +V++GV        T P  L+  R  KG+ FG ++  SD+P +VE Y+ K++ +++FITH +P S+IN+AFDLM  GESIR II+
Sbjct:  259 LIDLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKGSAFGGWRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSIIK 378          
The following BLAST results are available for this feature:
BLAST of CX069602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADHH_GADMO4.947e-2946.28Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_RAT8.438e-2947.97Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MOUSE8.438e-2947.15Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_HORSE1.439e-2844.72Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_SPAAU9.330e-2844.63Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_DICDI2.078e-2743.09Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHX_RABIT2.714e-2743.90Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
FRMA_SYNY33.545e-2748.76S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
ADHX_OCTVU1.032e-2645.45Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADHX_DROME2.298e-2645.00Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11F04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11F04-L7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069602 ID=CX069602; Name=CX069602; organism=Citrus sinensis; type=EST; length=524bp
AACAGGTGATTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTTGAA
TGTACTGGAAGCGTCCAGGCCATGATCTCAGCATTTGAATGCGTTCACGA
TGGTTGGGGTGTTGCTGTGCTTGTGGGTGTGCCAAACAAAGATGATGCAT
TCAAGACTCATCCCATGAATCTGCTTAATGAGAGGACTCTTAAGGGTACC
TTCTTTGGCAACTACAAACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAA
ATACATGAACAAGGAGATGGAGCTTGAGAAATTCATCACTCATGCTGTGC
CCTTCTCGGAGATAAACAAGGCATTTGACCTCATGCTTTCGGGAGAAAGC
ATTAGGTGCATCATTCGCATGGATGGTTAGATGTGTCTGCTGTTGCTGAT
CAATCTAATGGAGGCAGAATGAAGATGATCACATAATTTTCCAAGTTATA
TATTACCCCGAGAATAAGTAATTTATGCTGTATGTTTGATGACTTGCTGC
GAATGGCTTTCAAAGAGTTGTCCT
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