CX069602

Overview
NameCX069602
Unique NameCX069602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.001e-26
Identity = 53/123 (43.09%), Postives = 80/123 (65.04%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            QV+ ++T+GGVD S EC G+V  M +A EC   GWG +V+VGV        T P  L+  R  KGT FG +K R+ +P +V+KYM KE++++++ITH +  ++IN AF L+  G  +RC++ M
Sbjct:  257 QVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGGCLRCVLAM 379          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.119e-26
Identity = 55/123 (44.72%), Postives = 79/123 (64.23%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            Q+I E+T GGVD S ECTG+V  +  AF   H GWG  VLVG+         HPM L + R + G+ FG +KP+S LP+  ++ M   ++LE FIT+ +PF +IN AF L+  G+S+RCI+++
Sbjct:  266 QMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTVLVGIYPTPRTLPLHPMELFDGRRITGSVFGGFKPKSQLPNFAQQCMKGVVKLEPFITNELPFEKINDAFQLLRDGKSLRCILQI 388          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.732e-26
Identity = 52/123 (42.28%), Postives = 82/123 (66.67%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            QV+ EMT+GG+D + EC G+V  M +A E  H GWGV+V++GV        T P  L+  RT KG  FG +K    +P +V+ YM  ++ +++F++H++PF  IN+AFDLM +G+SIR ++++
Sbjct:  254 QVLGEMTDGGLDYTFECVGNVGIMRAALESCHKGWGVSVILGVAGGGQEISTRPFQLVTGRTWKGAAFGGWKSVESVPKLVDDYMAGKIMVDEFVSHSLPFDSINEAFDLMHAGKSIRTVLQL 376          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.140e-25
Identity = 54/121 (44.63%), Postives = 78/121 (64.46%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ EM+NGGVD S E  G +  M++A  C  + +GV+V+VGVP        +PM LL+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SGESIR I+
Sbjct:  253 EVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 373          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.318e-25
Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            QV+ EMT  GVD + EC G+V  M SA E  H GWG +V++GV        T P  L+  R  KGT FG  K R+ LP +VE  M+ ++EL  F+TH +   +IN+AFDLM  G+SIR +I
Sbjct:  247 QVLVEMTKWGVDHTFECIGNVNVMRSALESAHRGWGQSVIIGVAGAGKEISTRPFQLVTGRVWKGTAFGGVKGRTQLPGMVEDAMSGKIELAPFVTHTMELDKINEAFDLMHDGKSIRTVI 367          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 3.318e-25
Identity = 53/121 (43.80%), Postives = 78/121 (64.46%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ EM+NGGVD S E  G +  M++A  C  + +GV+V+VGVP        +PM LL+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR I+
Sbjct:  252 EVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTIL 372          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.660e-25
Identity = 54/124 (43.55%), Postives = 84/124 (67.74%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 374
            QV+++MTNGGVD S+EC G+V  M +A E    GWGV+VLVG  +  D   T P+ L+  RT KG+ FG +K +  +P +V+ Y++K+++L++FITH +P   +N A DLM  G+ IR ++ ++
Sbjct:  253 QVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDV-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSLE 375          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.261e-24
Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            ++IAEMTNGGVD ++EC G+   M +AFE    GWG  V+VGV   + +    PM L+  R +K TFFG +K    +P +V  YM K+ +L+  ++H +P  +IN AFDLM +G+S R I+
Sbjct:  257 EIIAEMTNGGVDFAIECIGNPDVMKAAFESTTVGWGTCVIVGVAVGEQSIPFSPMQLIMGRKIKATFFGGWKSVKSVPKLVSDYMAKKFDLDALVSHTLPLDKINDAFDLMNAGKSNRTIL 377          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.151e-24
Identity = 51/119 (42.86%), Postives = 75/119 (63.03%), Query Frame = 3
Query:    9 IAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            + EMT+GG D + +CTG+V  M +A E  H GWG +V++GV        T P  L+  RT KG  FG  K RS LP +V  Y++ ++++E+FITH  P + INKAF+ M +G+ IR ++
Sbjct:  260 LIEMTDGGCDFTFDCTGNVGVMRNALEACHKGWGTSVIIGVAAAGKEISTRPFQLVTGRTWKGAAFGGVKGRSQLPGIVNNYLDGKLKVEEFITHREPLAAINKAFEEMHAGDCIRAVV 378          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 2.151e-24
Identity = 52/121 (42.98%), Postives = 77/121 (63.64%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VGVP        +PM LL  RT KG  +G +K + D+P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR I+
Sbjct:  253 EVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAVYGGFKSKEDIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLRSGKSIRTIL 373          
The following BLAST results are available for this feature:
BLAST of CX069602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADHX_MAIZE3.001e-2643.09Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHL3_ARATH5.119e-2644.72Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADHX_MYXGL8.732e-2642.28Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
ADH1E_HORSE1.140e-2544.63Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
FRMA_PASPI3.318e-2546.28S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
ADH1S_HORSE3.318e-2543.80Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH1_GADCA5.660e-2543.55Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
ADH4_STRCA1.261e-2443.80Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
FADH_CANMA2.151e-2442.86S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADH1A_MACMU2.151e-2442.98Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11F04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11F04-L7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069602 ID=CX069602; Name=CX069602; organism=Citrus sinensis; type=EST; length=524bp
AACAGGTGATTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTTGAA
TGTACTGGAAGCGTCCAGGCCATGATCTCAGCATTTGAATGCGTTCACGA
TGGTTGGGGTGTTGCTGTGCTTGTGGGTGTGCCAAACAAAGATGATGCAT
TCAAGACTCATCCCATGAATCTGCTTAATGAGAGGACTCTTAAGGGTACC
TTCTTTGGCAACTACAAACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAA
ATACATGAACAAGGAGATGGAGCTTGAGAAATTCATCACTCATGCTGTGC
CCTTCTCGGAGATAAACAAGGCATTTGACCTCATGCTTTCGGGAGAAAGC
ATTAGGTGCATCATTCGCATGGATGGTTAGATGTGTCTGCTGTTGCTGAT
CAATCTAATGGAGGCAGAATGAAGATGATCACATAATTTTCCAAGTTATA
TATTACCCCGAGAATAAGTAATTTATGCTGTATGTTTGATGACTTGCTGC
GAATGGCTTTCAAAGAGTTGTCCT
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