CX069602

Overview
NameCX069602
Unique NameCX069602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.991e-22
Identity = 47/124 (37.90%), Postives = 75/124 (60.48%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNE-RTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            +VI EMT+GG D   EC GS   +  A+ C   GWG  + +GV            ++L+  + L G+ FG  K ++ +P ++++Y++ E+EL+KF+TH + F EIN AF L+L G+ IRC++ M
Sbjct:  266 EVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEGKCIRCVLWM 389          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.991e-22
Identity = 50/121 (41.32%), Postives = 74/121 (61.16%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ EMT  GVD S E  G  + M +A    H  +GV+V+VGVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  L+  ITH +PF +IN+ FDL+ +G+SIR ++
Sbjct:  252 EVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVGVPPAAEKLSFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMEKKFVLDPLITHTLPFHKINEGFDLLRTGKSIRSVL 372          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.305e-21
Identity = 49/121 (40.50%), Postives = 76/121 (62.81%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +VI E+++GGVD S E  G +  +++A    H   G +V+VGVP    +   +PM LL+ RT KG  FG +K +  +P +V  +M K+  L+  IT+ +PF +IN+ FDL+ SG+SIR I+
Sbjct:  253 EVIQEISDGGVDFSFEVIGRLDTVVAALLSCHGACGTSVIVGVPPDSQSLTVNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFSLDPLITNVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.907e-21
Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ EMT  GVD S E  G  + M +A    H  +GV+V++GVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  LE  ITH +PF +IN+ FDL+  G+SIR ++
Sbjct:  253 EVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 3
Query:    9 IAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            + ++T+GG D + +CTG+VQ M +A E  H GWG ++++GV        T P  L+  R  +G  FG  K R+ +PS+V+ Y++ ++++++FITH      INKAF  M +G  IR +I M
Sbjct:  258 LIDITDGGFDYTFDCTGNVQVMRNALESCHKGWGESIIIGVAAAGKEISTRPFQLVTGRVWRGCAFGGIKGRTQMPSLVQDYLDGKIKVDEFITHRHDLDNINKAFHDMHAGNCIRAVITM 378          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 50/122 (40.98%), Postives = 73/122 (59.84%), Query Frame = 3
Query:    3 QVIAEMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            +V+ ++T G GVD S E  G  + MISAF   H   G +V+VGVP        +P+ L   RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR ++
Sbjct:  252 EVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGTSVVVGVPPNASMITYNPLMLFTGRTWKGCVFGGWKSKDSVPKLVSDFMQKKFVLDPLITHTLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.958e-21
Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:    6 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            VI EMTNGGVD +++C G  + M +  +C   GWG    VGV   D      P+ L+  RTL+G+ FG +     +P +V  Y N +  LE  +TH +PF +IN+A DL+  G+SIR I+
Sbjct:  259 VIVEMTNGGVDFAIDCAGGSEVMKATVDCTTVGWGSCTFVGVNVNDKGLTISPVELILGRTLRGSSFGGWDV-DTVPKLVSDYKNGKFNLEALVTHTLPFEKINEALDLLKQGKSIRTIL 377          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 3
Query:    6 VIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 365
            VI EMTNGGVD +++C G  + M +  +C   GWG    VGV   D      P+ L+  RTLKGT FG +   + +P +V  Y N + +L+  +TH +PF +IN+A +L+  G+SIR ++
Sbjct:  259 VIVEMTNGGVDFAIDCAGGSEVMKATVDCATVGWGSCTFVGVNLADKGLTISPIELILGRTLKGTNFGGWDAET-VPKLVSDYKNGKFDLDALVTHTLPFDKINEALNLLDQGKSIRTVL 377          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20
Identity = 43/121 (35.54%), Postives = 74/121 (61.16%), Query Frame = 3
Query:    9 IAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 371
            + E+T GGV+ S EC GS++A+  AF   + G GV V++GV         HPM L   R++  + FG +KP++ LP  + + +   + L+ FI+H +PF +IN+A  L+  G+++RC++ +
Sbjct:  260 VMEITEGGVEYSFECAGSIEALREAFLSTNSGVGVTVMLGVHASPQLLPIHPMELFQGRSITASVFGGFKPKTQLPFFITQCLQGLLNLDLFISHQLPFHDINEAMQLLHQGKALRCLLHL 380          
BLAST of CX069602 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.461e-20
Identity = 45/124 (36.29%), Postives = 73/124 (58.87%), Query Frame = 3
Query:    3 QVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 374
            Q + ++T+GGVD + +CTG+V  M    +  H GWG   ++GV          P  ++  R + G+ FG  K RS+LP+ V++YM    +++++IT+  P   INKAFD M  G+ IRC++ M+
Sbjct:  253 QYVIDVTDGGVDYAFDCTGNVTVMQQELQFCHKGWGKLCVIGVAAAGKTLDFRPFLVVTGRQVLGSAFGGVKGRSELPNFVDEYMQGHFKVDEYITNEEPLKNINKAFDHMHEGKCIRCVVDMN 376          
The following BLAST results are available for this feature:
BLAST of CX069602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADHL7_ARATH9.991e-2237.90Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADH1_STRCA9.991e-2241.32Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_RABIT1.305e-2140.50Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1_APTAU2.907e-2141.32Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
FADH_PICPA3.797e-2138.02S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH1_NAJNA3.797e-2140.98Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADHQ_RABIT4.958e-2140.83Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADHP_RABIT6.476e-2140.00Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADHL4_ARATH1.443e-2035.54Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
FADH1_SCHPO2.461e-2036.29Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_11F04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11F04-L7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069602 ID=CX069602; Name=CX069602; organism=Citrus sinensis; type=EST; length=524bp
AACAGGTGATTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTTGAA
TGTACTGGAAGCGTCCAGGCCATGATCTCAGCATTTGAATGCGTTCACGA
TGGTTGGGGTGTTGCTGTGCTTGTGGGTGTGCCAAACAAAGATGATGCAT
TCAAGACTCATCCCATGAATCTGCTTAATGAGAGGACTCTTAAGGGTACC
TTCTTTGGCAACTACAAACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAA
ATACATGAACAAGGAGATGGAGCTTGAGAAATTCATCACTCATGCTGTGC
CCTTCTCGGAGATAAACAAGGCATTTGACCTCATGCTTTCGGGAGAAAGC
ATTAGGTGCATCATTCGCATGGATGGTTAGATGTGTCTGCTGTTGCTGAT
CAATCTAATGGAGGCAGAATGAAGATGATCACATAATTTTCCAAGTTATA
TATTACCCCGAGAATAAGTAATTTATGCTGTATGTTTGATGACTTGCTGC
GAATGGCTTTCAAAGAGTTGTCCT
back to top