EY665702

Overview
NameEY665702
Unique NameEY665702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.005e-17
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:  115 GNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 444
            G+ G   A LGS  A        ++RM+Y RFLEY+   R+  VDL+ENG  AIV+   PE+ +R  R RV LP  + EL+ + R+ NI   +H  +  +  +++  +GN
Sbjct:   25 GSFGGADANLGSNTA--------NTRMTYGRFLEYVDAGRITSVDLYENGRTAIVQVSDPEV-DRTLRSRVDLPTNAPELIARLRDSNIRLDSHPVR--NNGMVWGFVGN 123

HSP 2 Score: 41.5874 bits (96), Expect = 1.005e-17
Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 2 
Query:  515 VPVGPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGIFVGKTGV 790
            +P GPG  +   +SKA+F  +  TGV F      + E K+   E   FL +P++F+A   +   +GV  +GPPG   KT   + I  G+ GV
Sbjct:  144 MPGGPGQAMNFGKSKARFQMDAKTGVMF-DDVAGIDEAKEELQEVVTFLKQPERFTAV-GAKIPKGVLLVGPPGT-GKTLLAKAI-AGEAGV 231
The following BLAST results are available for this feature:
BLAST of EY665702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FTSH1_SYNY31.005e-1737.27Cell division protease ftsH homolog 1 OS=Synechocy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665702 ID=EY665702; Name=EY665702; organism=Citrus sinensis; type=EST; length=921bp
AGTACGGTCGGGATTCCGGGTCGACCCACGCGTCCGGCCAAAGTAGCCGT
TGTACAGGCATCTTTGAGCCAGAAGCAGCATGAAGGAAGAAGAGGGTTTC
TTAAGAAGCTGCTTGGAAATGTTGGAGTTGGTACTGCTTTGTTGGGGAGT
GGGAAAGCCTATGCCGATGAACAGGGGGTTTCTTCCTCTAGGATGTCTTA
CTCTAGGTTCTTGGAGTATCTTGTTAAGGACAGGGTGAAGAAGGTTGATT
TGTTTGAGAATGGTACCATAGCTATTGTGGAGGCTATTTCCCCTGAGTTG
GGTAACCGGGTGCAACGAGTTCGCGTTCAACTTCCAGGTCTAAGTCAGGA
GCTTCTCCAGAAATTCAGGGAGAAGAACATTGATTTTGCTGCCCATAATG
CTCAAGAGGACTCAGGATCATTGTTGTTTAACTTGATTGGGAATCTGGCT
TTCCCACTTATCTTAATTGGAGGGCTGTTCCTTCTCTCAAGGCGTTCATC
TGGTGGAATGGGCGGTCCCTGTGGGGCCTGGTTTCCCCCTTGCCCTTTGT
CAGTCCAAAGCTAAATTTCCAAAGGAAACAAATACTGGTGTGAACTTTTG
ATGAAGTTTCCCGAATTTGATGGAGCAAAAAAAAATTTTCTTGGAAAGGG
GGGAATTCCTTTAAAAACCCAAAAAATTTTCAGCTTTTTGGAACTCGTAT
TCCCAAAGGGGGGTCTTTTCTCTTGGCCCCCCCGGGAATTGGGAAAAAAC
CTTTTTTTGCCAGGGAATTTTTGTGGGGAAAACCGGGGTTCCTTTTTTTT
CTCCCTTTTCGGGGTTTCAAAATTTTTTTAAAAAAATTTTTTTGTGGGTG
TCGGGGGTTTTTTTAAAAGGGCCCAAAAAATTTTTTTTCAAAAAAAGCGA
AAAAAAAAAAAAATTCTCCTT
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