EY665689

Overview
NameEY665689
Unique NameEY665689
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8291 contig Csv1_Contig8291:12..868. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.731e-54
Identity = 114/236 (48.31%), Postives = 146/236 (61.86%), Query Frame = 2
Query:  101 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD 805
            + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEG+KEDVD AVKAA+ AF  G PW R   ++R  ++ + AD                 GK +  + + D+      LRYYAG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K AEQTPL ALY A+L K AG P GV+N VPGFG TAGAAI SH D DK  FTG T+
Sbjct:   32 QQPEVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTE 267          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.261e-54
Identity = 113/236 (47.88%), Postives = 146/236 (61.86%), Query Frame = 2
Query:  101 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD 805
            + PEI + ++FIN E+ D++S KTF T++P TG+ I  +AEGDKEDVD AV+AAR AF  G PW R   ++R  ++ + AD                 GK +  + + D+      LRYYAG ADK HG+ L +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K +EQTPL ALY A+L K AG P GV+N VPG+G TAGAAI SH D DK  FTG T+
Sbjct:   34 QQPEIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSPWRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTE 269          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.953e-54
Identity = 117/233 (50.21%), Postives = 139/233 (59.66%), Query Frame = 2
Query:  110 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD 805
            +I+ TKLFIN E+ DSVSGKTF   +P T E I  + E DKEDVD AVKAAR+AF  G PW     +ER  ++ K AD                 GK+ + A + D+      LRY AG ADKI G  + +      YT  EPIGV G I PWN P  +   K+ PAL  G T+IVKPAEQTPL AL+ A L K AG P GV+N VPG+G TAGAAI SHMD DK  FTG T+
Sbjct:   17 KIQHTKLFINNEWHDSVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTE 249          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.036e-54
Identity = 114/234 (48.72%), Postives = 144/234 (61.54%), Query Frame = 2
Query:  107 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD 805
            PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEG+KEDVD AVKAAR AF  G PW R   ++R  ++ + AD                 GK +  + + D+      LRYYAG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K AEQTPL ALY A+L K AG P GV+N VPGFG TAGAAI SH   DK  FTG T+
Sbjct:   34 PEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTE 267          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: AL1B1_MOUSE (Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.036e-54
Identity = 115/234 (49.15%), Postives = 144/234 (61.54%), Query Frame = 2
Query:  107 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD 805
            PEI + KLFIN E+ D+VS KTF T++P TGE I  +AEGD+ DVDLAVKAAR+AF  G PW R   +ER  ++ + AD                 GK    + + D+       RY+AG ADK HG+ + M      +T  EP+GV G IIPWNFP  M   K++PALA G T+++K AEQTPL ALY A L K AG P GV+N + G+G TAGAAI  HMD DK  FTG T+
Sbjct:   34 PEICYNKLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTE 267          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 5.036e-54
Identity = 118/246 (47.97%), Postives = 149/246 (60.57%), Query Frame = 2
Query:  110 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD-GRTSRD-AGRNN 838
            EIK+TK+FIN E+ +S SG+ F   +P TGE +  + E DK D+D AV+AAR AF  G  W R   +ER  ++ K AD                 GK    A   D+ G   TLRYYAG ADKIHG  + +      +T  EPIGV G IIPWNFP  MF  K++PAL  G T+++KPAEQTPL ALY   L K AG P GV+N +PG+G TAGAAI SH+  DK  FTG T+ G+  ++ AGR+N
Sbjct:   34 EIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSN 279          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 5.036e-54
Identity = 118/246 (47.97%), Postives = 149/246 (60.57%), Query Frame = 2
Query:  110 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD-GRTSRD-AGRNN 838
            EIK+TK+FIN E+ +S SG+ F   +P TGE +  + E DK D+D AV+AAR AF  G  W R   +ER  ++ K AD                 GK    A   D+ G   TLRYYAG ADKIHG  + +      +T  EPIGV G IIPWNFP  MF  K++PAL  G T+++KPAEQTPL ALY   L K AG P GV+N +PG+G TAGAAI SH+  DK  FTG T+ G+  ++ AGR+N
Sbjct:   34 EIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSN 279          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: AL1A2_HUMAN (Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 6.578e-54
Identity = 117/246 (47.56%), Postives = 148/246 (60.16%), Query Frame = 2
Query:  110 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD-GRTSRD-AGRNN 838
            EIK+TK+FIN E+ +S SG+ F   +P TGE +  + E DK D+D AV+AAR AF  G  W R   +ER  ++ K AD                 GK    A   D+ G   T RYYAG ADKIHG  + +      +T  EPIGV G IIPWNFP  MF  K++PAL  G T+++KPAEQTPL ALY   L K AG P GV+N +PG+G TAGAAI SH+  DK  FTG T+ G+  ++ AGR+N
Sbjct:   34 EIKYTKIFINNEWQNSESGRVFPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSN 279          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.499e-53
Identity = 116/233 (49.79%), Postives = 139/233 (59.66%), Query Frame = 2
Query:  110 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD 805
            +I+ TKLFIN E+ +SVSGKTF   +P T E I  + E DKEDVD AVKAAR+AF  G PW     +ER  ++ K AD                 GK+ + A + D+      LRY AG ADKI G  + +      YT  EPIGV G I PWN P  +   K+ PAL  G T+IVKPAEQTPL AL+ A L K AG P GV+N VPG+G TAGAAI SHMD DK  FTG T+
Sbjct:   17 KIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTE 249          
BLAST of EY665689 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.499e-53
Identity = 113/234 (48.29%), Postives = 144/234 (61.54%), Query Frame = 2
Query:  107 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNGVPGFGQTAGAAIPSHMDFDKGNFTGPTD 805
            PEI++ +LFIN E+ D+VS KTF T++P TGE I  +AEGD+ DVDLAV+AAR+AF  G PW R   +ER  ++ + AD                 GK    + + D+       RY AG ADK HG+ + M      +T  EP+GV G IIPWNFP  M   K++PALA G T+++K AEQTPL ALY A L K AG P GV+N + G+G TAGAAI  HMD DK  FTG T+
Sbjct:   34 PEIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTE 267          
The following BLAST results are available for this feature:
BLAST of EY665689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH2_RAT1.731e-5448.31Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH2_PIG2.261e-5447.88Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
ALDH1_MACPR2.953e-5450.21Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
ALDH2_MOUSE5.036e-5448.72Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
AL1B1_MOUSE5.036e-5449.15Aldehyde dehydrogenase X, mitochondrial OS=Mus mus... [more]
AL1A2_RAT5.036e-5447.97Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Al... [more]
AL1A2_MOUSE5.036e-5447.97Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2... [more]
AL1A2_HUMAN6.578e-5447.56Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2... [more]
ALDH1_ELEED2.499e-5349.79Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
AL1B1_RAT2.499e-5348.29Aldehyde dehydrogenase X, mitochondrial OS=Rattus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665689 ID=EY665689; Name=EY665689; organism=Citrus sinensis; type=EST; length=857bp
AGCATAAGGACCCAGAGAGTTTAGATAATACCACAAAGATAGAGAAAGAT
AGAGAGAGATGGAGGGCAGTCTTAGCAATGGAAGCTGCAAGTCTTTATTC
AAGATGCCGGAGATCAAGTTCACGAAGCTGTTCATTAACGGAGAATTTGT
TGATTCTGTTTCAGGGAAAACGTTTGAAACAATTGATCCAAGGACAGGAG
AAGCAATAGCAAGAATTGCTGAAGGAGACAAGGAGGATGTTGATCTTGCC
GTCAAGGCAGCACGTCAGGCGTTTGATCACGGTCCATGGCCACGTTTTTC
TGGAGCCGAAAGGAGAGGGATAATGTTGAAGTTTGCGGACTTAATTGAAG
AACACGCAGAGGTATTAGCGGTGCTGGAAGCTCTTGATGCTGGCAAATTG
CACAGTTGGGCCAAAATGGGCGACATTCCAGGAGCTGCTAATACCCTTCG
TTACTATGCTGGTGCAGCTGATAAAATACACGGAGAGGTTCTAAAAATGT
CTCGGGCGTTACAGGGCTACACGTTGCGTGAGCCAATTGGCGTTGTTGGA
CACATCATTCCCTGGAATTTTCCTACCACCATGTTTTTCATGAAGGTTAG
CCCTGCGTTAGCCGCTGGGTGCACAATGATTGTCAAGCCTGCTGAGCAAA
CTCCCCTTATTGCTCTTTATTTTGCCCATCTTGCCAAGCTGGCTGGAGTA
CCTGATGGAGTGCTTAATGGTGTACCTGGATTTGGACAAACTGCTGGGGC
TGCCATCCCCTCCCATATGGACTTTGATAAAGGTAATTTTACAGGGCCTA
CGGATGGCCGAACGTCAAGGGATGCAGGCCGCAACAACAAACAATCTTGA
AGCCCGT
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