CX043297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER_THEVL (Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.144e-32 Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 237 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 MA YK+ L+ P G E + ED+YILD AEE G+DLP+SCRAGACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC++YP SDC I +++EEEL Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.144e-32 Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 237 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 MA YK+ L+ P G E + ED+YILD AEE G+DLP+SCRAGACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC++YP SDC I +++EEEL Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.144e-32 Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 237 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 MA YK+ L+ P G E + ED+YILD AEE G+DLP+SCRAGACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC++YP SDC I +++EEEL Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.144e-32 Identity = 63/96 (65.62%), Postives = 80/96 (83.33%), Query Frame = 3 Query: 240 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 A YK+ L P G++ E +D YILDAAEEAG+DLPYSCRAGACS+CAGK+ +G+VDQSD SFLDD+QM+ G++LTC++YPTSDC I +HKEE+L Sbjct: 1 ATYKVTLKTPSGDQ-TIECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDL 95
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER_GUITH (Ferredoxin OS=Guillardia theta GN=petF PE=3 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 4.106e-32 Identity = 64/97 (65.98%), Postives = 80/97 (82.47%), Query Frame = 3 Query: 237 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 MA YK+KL G +G + + +DQYILDAAEE G+DLPYSCRAGACSTCAGK+ +GSVDQSD SFLDD+Q+ G++LTC++YPTSDC I +H+EE L Sbjct: 1 MATYKVKLSG-EGVDKTIDCPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVAAGSVDQSDQSFLDDSQIGDGFVLTCVAYPTSDCTILTHQEEGL 96
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.106e-32 Identity = 66/96 (68.75%), Postives = 78/96 (81.25%), Query Frame = 3 Query: 243 VYKIKLIGPK-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 +YKI+L+ K G + DQYILDAAEE GVDLPYSCRAGACSTCAGKLV GSVDQSD SFLD+ Q+ G++LTC++YPTSDCVIQ+H+EE L Sbjct: 1 MYKIQLVNQKEGVDVTINCPGDQYILDAAEEQGVDLPYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSDCVIQTHQEEAL 96
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER_SAMNI (Ferredoxin OS=Sambucus nigra PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.363e-32 Identity = 64/96 (66.67%), Postives = 80/96 (83.33%), Query Frame = 3 Query: 240 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 A YK+KLI P G + EFE +D YIL+ AEE G+D+PYSCRAG+CS+CAGKLV+GSVDQSD SFLDD Q+E G++LTC++YP SD I++HKEEEL Sbjct: 1 ASYKVKLITPDGPQ-EFECPDDVYILEHAEELGIDIPYSCRAGSCSSCAGKLVAGSVDQSDQSFLDDEQIEEGWVLTCVAYPKSDVTIETHKEEEL 95
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER_ARCLA (Ferredoxin OS=Arctium lappa PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.363e-32 Identity = 67/97 (69.07%), Postives = 84/97 (86.60%), Query Frame = 3 Query: 240 AVYKIKLIGPKGEEHEFEAQEDQYILD-AAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 A YK+ LI P+G++ EFE +D YILD AAEE G DLPYSCRAG+CS+CAGK+ +GSVDQSDGS+LDD+QMEAG++LTC++YPTSD I++HKEEEL Sbjct: 1 ATYKVTLITPEGKQ-EFEVPDDVYILDHAAEEVG-DLPYSCRAGSCSSCAGKVTAGSVDQSDGSYLDDDQMEAGWVLTCVAYPTSDVTIETHKEEEL 95
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER5_MAIZE (Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.004e-32 Identity = 69/132 (52.27%), Postives = 94/132 (71.21%), Query Frame = 3 Query: 165 TSLGSVKGISKTFGLKCSPNFQASM-----------AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 T L S + + +F L+ +P +M A Y +KLI P+GE E + +D YILD AEE G+DLPYSCRAG+CS+CAGK+VSGS+DQSD SFLDD+Q+ G++LTC++YPTSD VI++HKE++L Sbjct: 3 TVLSSPRAPAFSFSLRAAPATTVAMTRGASSRLRAQATYNVKLITPEGEV-ELQVPDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGSLDQSDQSFLDDSQVADGWVLTCVAYPTSDVVIETHKEDDL 133
BLAST of CX043297 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.004e-32 Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 3 Query: 240 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 527 A YK+ L+ P G + E +D+YILDAAEE G+DLPYSCRAGACS+CAGK+ SGSVDQSD SFL+D QME G++LTCI+YPT D I++HKEEEL Sbjct: 1 ATYKVTLVTPSGSQ-VIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 95 The following BLAST results are available for this feature:
BLAST of CX043297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043297 ID=CX043297; Name=CX043297; organism=Citrus sinensis; type=EST; length=727bpback to top |