CX674771

Overview
NameCX674771
Unique NameCX674771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: IREB2_HUMAN (Iron-responsive element-binding protein 2 OS=Homo sapiens GN=IREB2 PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.952e-58
Identity = 112/204 (54.90%), Postives = 149/204 (73.04%), Query Frame = -1
Query:  240 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIR 851
            I ++S  AKYL  RG+  R+FNSYG+RRGND VM RGTFANI+L NK + G+  PKT+H P+G+ L VF+AA  Y+  G   IILAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F  GE+ADSLGL+G E FS+  P ++S   PG  + + T +GK F+    F+ +VE+  + HGG+L FV R
Sbjct:  761 IARNSAAAKYLTNRGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFI-GKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLQFLPGENADSLGLSGRETFSLTFPEELS---PGITLNIQTSTGKVFSVIASFEDDVEITLYKHGGLLNFVAR 960          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: IREB2_RAT (Iron-responsive element-binding protein 2 OS=Rattus norvegicus GN=Ireb2 PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 2.550e-58
Identity = 112/207 (54.11%), Postives = 148/207 (71.50%), Query Frame = -1
Query:  231 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLI 851
            I + S  AKYL  RG+  R+FNSYG+RRGND VM RGTFANI+L NK + G+  PKT+H P+G+ L VF+AA  Y+  G   IILAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F  GE+ADSLGL+G E FS+  P    E+ PG  + + T +GK F+    F+ +VE+  + HGG+L FV R  +
Sbjct:  761 IARSSAAAKYLTNRGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFI-GKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLEFLPGENADSLGLSGREVFSLSFP---EELFPGITLNIKTSTGKEFSVIAAFENDVEITLYKHGGLLNFVARKFL 963          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: ACON_DEIRA (Aconitate hydratase OS=Deinococcus radiodurans GN=acn PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.550e-58
Identity = 119/210 (56.67%), Postives = 147/210 (70.00%), Query Frame = -1
Query:  225 DSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVT--VTTDSGKSFTCTV--RFDTEVELAYFDHGGILPFVIRNLIKQ 842
            D+P  +YL ERG+  +DFNSYGSRRGND +M RGTFANIRL N+L  G  G  T +   GE  S+FDA+  YK AG   ++LAG +YG GSSRDWAAKG  LLGVKAVIA+SFERIHRSNLVGMG++PL +K GE ADSLG+ G E F   LP    +++P QDVT  VT   G +   TV  R DT VE+ Y+ +GGIL  V+R ++ +
Sbjct:  693 DTPAGRYLTERGIAPKDFNSYGSRRGNDRIMTRGTFANIRLKNQLAPGTEGGFTTNFLNGEVTSIFDASTAYKEAGVPLVVLAGKDYGMGSSRDWAAKGTFLLGVKAVIAESFERIHRSNLVGMGVLPLQYKNGETADSLGINGDETFEFVLP---GDLKPRQDVTVKVTGKDGNTRDITVMCRIDTPVEIDYYKNGGILQTVLRGILSK 899          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: IREB2_XENLA (Iron-responsive element-binding protein 2 OS=Xenopus laevis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.330e-58
Identity = 109/207 (52.66%), Postives = 153/207 (73.91%), Query Frame = -1
Query:  231 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLI 851
            I + SP AKYL+++ +  R+FNSYG+RRGND VM RGTFAN++L NKL+ G+ GPKT+H+P+G+ + VFDAA  Y+ +    II+AG +YG G+SRDWAAKGP LLGV+ VIA+S+E+IH+ +LVGMGI PL F +GE+A++LGL+G E++S+ LP    ++ PG  V + T++GK F     FD E E+  + HGGIL +V R  +
Sbjct:  753 IPRTSPAAKYLMQKNLVPREFNSYGARRGNDAVMTRGTFANMKLFNKLV-GKTGPKTIHLPSGQTMDVFDAAELYQRSEIPLIIIAGKKYGLGNSRDWAAKGPFLLGVRVVIAESYEKIHKDHLVGMGIAPLQFLSGENAETLGLSGKEQYSLSLP---VDLTPGHKVEIKTNTGKIFHVIAAFDNEAEVTLYKHGGILSYVARKYL 955          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: IREB2_MOUSE (Iron-responsive element-binding protein 2 OS=Mus musculus GN=Ireb2 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.419e-58
Identity = 112/207 (54.11%), Postives = 147/207 (71.01%), Query Frame = -1
Query:  231 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLI 851
            I + S  AKYL  RG+  R+FNSYG+RRGND VM RGTFANI+L NK + G+  PKT+H P+G+ L VF+AA  Y+  G   IILAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F  GE+ADSLGL+G E FS+  P    E+ PG  + + T +GK F+    F  +VE+  + HGG+L FV R  +
Sbjct:  761 IARSSAAAKYLTNRGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFI-GKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLEFLPGENADSLGLSGREVFSLSFP---EELFPGITLNIKTSTGKEFSVIASFANDVEITLYKHGGLLNFVARKFL 963          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: ACON1_ECOLI (Aconitate hydratase 1 OS=Escherichia coli (strain K12) GN=acnA PE=1 SV=3)

HSP 1 Score: 223.016 bits (567), Expect = 1.653e-57
Identity = 115/212 (54.25%), Postives = 145/212 (68.40%), Query Frame = -1
Query:  228 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVT----TDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLIK 851
            I  DSP  +YL  RGVER+DFNSYGSRRGN EVM RGTFANIR+ N+++ G  G  T H+P  + +S++DAAM+YK       ++AG EYGSGSSRDWAAKGP LLG++ VIA+SFERIHRSNL+GMGI+PL F  G    +LGLTG E+  I     +  ++PG  V VT      S +   C  R DT  EL Y+ + GIL +VIRN++K
Sbjct:  683 IKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTRHLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDI---GDLQNLQPGATVPVTLTRADGSQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK 891          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: ACON_STAAW (Aconitate hydratase OS=Staphylococcus aureus (strain MW2) GN=acnA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.159e-57
Identity = 119/213 (55.87%), Postives = 144/213 (67.61%), Query Frame = -1
Query:  225 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGK----SFTCTVRFDTEVELAYFDHGGILPFVIRNLIKQ 851
            I KD+P  KYL +  V  R+FNSYGSRRGN EVM RGTFANIR+ N+L  G  G  T + PT E + +FDAAMKYK  G G ++LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE ADSLGL G E  S+++      ++P   V VT          F   VRFD+ VE+ Y+ HGGIL  V+RN + Q
Sbjct:  692 IGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNID---ENVQPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRNKLAQ 901          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: ACON_STAAS (Aconitate hydratase OS=Staphylococcus aureus (strain MSSA476) GN=acnA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.159e-57
Identity = 119/213 (55.87%), Postives = 144/213 (67.61%), Query Frame = -1
Query:  225 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGK----SFTCTVRFDTEVELAYFDHGGILPFVIRNLIKQ 851
            I KD+P  KYL +  V  R+FNSYGSRRGN EVM RGTFANIR+ N+L  G  G  T + PT E + +FDAAMKYK  G G ++LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE ADSLGL G E  S+++      ++P   V VT          F   VRFD+ VE+ Y+ HGGIL  V+RN + Q
Sbjct:  692 IGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNID---ENVQPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRNKLAQ 901          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: ACON_STAAR (Aconitate hydratase OS=Staphylococcus aureus (strain MRSA252) GN=acnA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.159e-57
Identity = 119/213 (55.87%), Postives = 144/213 (67.61%), Query Frame = -1
Query:  225 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGK----SFTCTVRFDTEVELAYFDHGGILPFVIRNLIKQ 851
            I KD+P  KYL +  V  R+FNSYGSRRGN EVM RGTFANIR+ N+L  G  G  T + PT E + +FDAAMKYK  G G ++LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE ADSLGL G E  S+++      ++P   V VT          F   VRFD+ VE+ Y+ HGGIL  V+RN + Q
Sbjct:  692 IGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNID---ENVQPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRNKLAQ 901          
BLAST of CX674771 vs. ExPASy Swiss-Prot
Match: ACON_STAAN (Aconitate hydratase OS=Staphylococcus aureus (strain N315) GN=acnA PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.159e-57
Identity = 119/213 (55.87%), Postives = 144/213 (67.61%), Query Frame = -1
Query:  225 IHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGK----SFTCTVRFDTEVELAYFDHGGILPFVIRNLIKQ 851
            I KD+P  KYL +  V  R+FNSYGSRRGN EVM RGTFANIR+ N+L  G  G  T + PT E + +FDAAMKYK  G G ++LAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE ADSLGL G E  S+++      ++P   V VT          F   VRFD+ VE+ Y+ HGGIL  V+RN + Q
Sbjct:  692 IGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNID---ENVQPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRNKLAQ 901          
The following BLAST results are available for this feature:
BLAST of CX674771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
IREB2_HUMAN1.952e-5854.90Iron-responsive element-binding protein 2 OS=Homo ... [more]
IREB2_RAT2.550e-5854.11Iron-responsive element-binding protein 2 OS=Rattu... [more]
ACON_DEIRA2.550e-5856.67Aconitate hydratase OS=Deinococcus radiodurans GN=... [more]
IREB2_XENLA3.330e-5852.66Iron-responsive element-binding protein 2 OS=Xenop... [more]
IREB2_MOUSE7.419e-5854.11Iron-responsive element-binding protein 2 OS=Mus m... [more]
ACON1_ECOLI1.653e-5754.25Aconitate hydratase 1 OS=Escherichia coli (strain ... [more]
ACON_STAAW2.159e-5755.87Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAS2.159e-5755.87Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAR2.159e-5755.87Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAN2.159e-5755.87Aconitate hydratase OS=Staphylococcus aureus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_8F02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-8F02-L4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674771 ID=CX674771; Name=CX674771; organism=Citrus sinensis; type=EST; length=851bp
TTTTTTTAATCATCAAACAGGAAAAGAATTGTATTACTGAAAATAATTCT
TCGTTCACAGAACAAAGATATCGACCTTTTGAATTGTTCCCAGAAAAAAA
GACTCAAGTCCCATCAAAGGGATCTTTCTTACATTATTTGAACTTTATTC
AACTCTCACATTTTACAACCGTAAGTTTCTTTGGATGAAGCAAGTCCGCC
TAGTAGAAATGATGCAGTTATTTACTGCTTAATCAGGTTGCGAATGACAA
ACGGAAGGATGCCTCCATGATCAAAGTAAGCCAATTCTACCTCTGTGTCA
AAACGGACTGTGCAGGTAAAGGATTTTCCACTGTCAGTGGTGACAGTCAC
ATCTTGGCCAGGTCTTATTTCACTGATCTTACTTGGGAGATCAATACTAA
ATCTCTCATGACCAGTCAAACCCAATGAGTCTGCATCCTCACCAGCCTTG
AAACAGAGAGGAATGATACCCATTCCAACCAAATTACTGCGATGAATTCT
TTCAAAACTTTTGGCGATCACTGCTTTAACTCCCAACAACATTGGACCCT
TGGCAGCCCAATCACGGGAACTTCCACTTCCATATTCAGCTCCAGCCAAG
ATAATTGTACCATGACCAGCACTCTTGTATTTCATTGCTGCATCAAAAAC
AGAGAGTTTCTCCCCTGTTGGAACATGGACCGTCTTTGGACCCACTTCCC
CATTCAAGAGCTTGTTAACAAGACGGATATTTGCAAAAGTTCCTCTAGCC
ATCACTTCATCATTGCCACGACGACTACCATAAGAATTGAAGTCCCTGCG
TTCCACACCACGCTCTAGCAGGTACTTTGCAGTGGGACTGTCTTTGTGGA
T
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