CX043316

Overview
NameCX043316
Unique NameCX043316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length287
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: LYAG_PONAB (Lysosomal alpha-glucosidase OS=Pongo abelii GN=GAA PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.098e-20
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 3
Query:    3 GHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWESVAESA-RNALGMR 287
            G YA HWTGD   +WE L  S+  +L F + GVP+VG+D+CGF    +EELC RW ++GAFYPF  +H    +  QE Y +   A+ A R AL +R
Sbjct:  607 GRYAGHWTGDVWSSWEQLASSVPEILQFNLLGVPLVGADVCGFLGNTSEELCVRWTQLGAFYPFMRNHNGLLNLPQEPYSFSEPAQQAMRKALTLR 702          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: AGLU_ASPOR (Alpha-glucosidase OS=Aspergillus oryzae GN=agdA PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.658e-20
Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 3
Query:    3 GHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWESVAESARNALGMR 287
            G +A HW GDN   W  + +SIS  L F +FG+PM G D CGF     EELCNRW+++ AF+PF  +H    +  QE Y+W SV ++ + A+ +R
Sbjct:  651 GKWAGHWGGDNFSKWGSMFFSISQALQFSLFGIPMFGVDTCGFNGNTDEELCNRWMQLSAFFPFYRNHNVLSAIPQEPYRWASVIDATKAAMNIR 745          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: AMYG_DEBOC (Glucoamylase 1 OS=Debaryomyces occidentalis GN=GAM1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.797e-18
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 3
Query:    3 GHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWESVAESARNALGMR 287
            G +  HW GDN   W    +SI    + GI G+P  G+D+CGF      ELC+RW+++G+F+PF  +H    +  QE Y WESVAE+ R ++ +R
Sbjct:  629 GKWTGHWGGDNTADWAYAYFSIPQAFSMGIAGLPFFGADVCGFNGNSDSELCSRWMQLGSFFPFYRNHNYLGAIDQEPYVWESVAEATRTSMAIR 723          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: MGAL1_HUMAN (Putative maltase-glucoamylase-like protein FLJ16351 OS=Homo sapiens PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.039e-17
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 3
Query:    3 GHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWESVAE 260
            G +  H  G+N   W+ L  SI  M+ F +FG+P  G+DICGF+     E+C RW+++GAFYPFS +H N  + RQ+   W S  E
Sbjct:  398 GRWGGHRLGNNTAAWDQLGKSIIGMMEFSLFGIPYTGADICGFFGDAEYEMCVRWMQLGAFYPFSRNHNNIGTRRQDPVAWNSTFE 483          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: AGLU_CANTS (Alpha-glucosidase OS=Candida tsukubaensis PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.039e-17
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 3
Query:    3 GHYAAHWTGDNKGTWEDLK------------YSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWESVAESARNALGMR 287
            G +  HW GDN   W  L              SI  +L F IFG+ ++G+DICGF     EELCNRW+ +GAF PF  +H    +  QE ++W+SVA ++R A+  R
Sbjct:  721 GKFTGHWLGDNYALWTILPGEEAYKAGAGMAQSIDGVLQFQIFGIHLIGADICGFNRNSDEELCNRWMMLGAFLPFMRNHNTIGAIAQEPFRWDSVANASRIAINKR 827          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: AMYG_CANAL (Glucoamylase 1 OS=Candida albicans GN=GAM1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.100e-14
Identity = 34/95 (35.79%), Postives = 55/95 (57.89%), Query Frame = 3
Query:    3 GHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWESVAESARNALGMR 287
            G Y  HW GDN   +  + +SI   L+ G+ G+P  G D CGF      ELC+RW+++ +F+PF  +H    +  QE Y WE+V ++ + ++ +R
Sbjct:  619 GKYMGHWGGDNYADYYMMYFSIPQALSMGLSGIPFFGVDACGFNGNTDMELCSRWMQLASFFPFYRNHNVLGAIPQEPYVWEAVMKATKTSINVR 713          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: GLU2A_YEAST (Glucosidase 2 subunit alpha OS=Saccharomyces cerevisiae GN=ROT2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.459e-14
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   12 AAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWESVAES 263
            AA WTGDN   W+ LK SI  +L+  I G+P +G+DI GF   PT EL  RW + G +YPF   HA+  + R+E Y +    +S
Sbjct:  608 AATWTGDNVANWDYLKISIPMVLSNNIAGMPFIGADIAGFAEDPTPELIARWYQAGLWYPFFRAHAHIDTKRREPYLFNEPLKS 691          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: GANAB_PIG (Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.036e-13
Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 3
Query:    9 YAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWES-VAESARNALGMR 287
            + A WTGDN   W+ LK SI   L+ G+ GV   G+D+ GF+  P  EL  RW ++GA+ PF   HA+  + R+E +   +   +  R+ALG R
Sbjct:  611 FGAVWTGDNTAEWDHLKISIPMCLSLGLVGVSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAHLDTGRREPWLLPTQYQDMIRDALGQR 704          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: GANAB_HUMAN (Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.345e-12
Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 3
Query:    9 YAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQELYQWESV-AESARNALGMR 287
            + A WTGDN   W+ LK SI   L+ G+ G+   G+D+ GF+  P  EL  RW ++GA+ PF   HA+  + R+E +   S   +  R+ALG R
Sbjct:  611 FGAVWTGDNTAEWDHLKISIPMCLSLGLVGLSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAHLDTGRREPWLLPSQHNDIIRDALGQR 704          
BLAST of CX043316 vs. ExPASy Swiss-Prot
Match: GLU2A_SCHPO (Glucosidase 2 subunit alpha OS=Schizosaccharomyces pombe GN=gls2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.995e-12
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 3
Query:   12 AAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSWDHANYYSPRQE 233
            AA+W GD   TWE L+ SI T+L  GI G+   G+D+ GF+  P  EL  RW E   FYPF   HA+  + R+E
Sbjct:  594 AANWIGDTMTTWEHLRGSIPTVLTNGISGMAFSGADVAGFFGNPDAELFVRWYETAIFYPFFRAHAHIDTKRRE 667          
The following BLAST results are available for this feature:
BLAST of CX043316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
LYAG_PONAB5.098e-2046.88Lysosomal alpha-glucosidase OS=Pongo abelii GN=GAA... [more]
AGLU_ASPOR6.658e-2044.21Alpha-glucosidase OS=Aspergillus oryzae GN=agdA PE... [more]
AMYG_DEBOC2.797e-1841.05Glucoamylase 1 OS=Debaryomyces occidentalis GN=GAM... [more]
MGAL1_HUMAN4.039e-1743.02Putative maltase-glucoamylase-like protein FLJ1635... [more]
AGLU_CANTS4.039e-1740.19Alpha-glucosidase OS=Candida tsukubaensis PE=1 SV=... [more]
AMYG_CANAL1.100e-1435.79Glucoamylase 1 OS=Candida albicans GN=GAM1 PE=1 SV... [more]
GLU2A_YEAST5.459e-1444.05Glucosidase 2 subunit alpha OS=Saccharomyces cerev... [more]
GANAB_PIG6.036e-1339.36Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANA... [more]
GANAB_HUMAN1.345e-1239.36Neutral alpha-glucosidase AB OS=Homo sapiens GN=GA... [more]
GLU2A_SCHPO2.995e-1245.95Glucosidase 2 subunit alpha OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10C06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10C06-F12-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043316 ID=CX043316; Name=CX043316; organism=Citrus sinensis; type=EST; length=287bp
CTGGTCATTATGCTGCACACTGGACGGGTGATAATAAGGGAACATGGGAA
GATCTAAAGTATTCTATTTCAACCATGCTGAACTTCGGCATATTTGGGGT
TCCAATGGTTGGTTCCGATATATGTGGGTTCTATCCTGCCCCAACAGAAG
AGCTTTGTAACCGATGGATAGAAGTAGGTGCATTCTATCCGTTCTCATGG
GATCATGCAAACTACTACTCCCCAAGACAGGAGCTTTATCAGTGGGAGTC
AGTAGCAGAGTCCGCCCGAAATGCTCTGGGTATGAGG
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